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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRAF7 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
61.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
55.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
55.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
49.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
46.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
44.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
44.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
38.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
34.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
32.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
32.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
31.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
30.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
29.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
28.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
28.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
28.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
28.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
27.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
27.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
27.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
26.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
25.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
25.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
24.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
24.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
24.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
23.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
23.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
21.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
21.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
20.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
20.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
20.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
20.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
20.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
19.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
19.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
19.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
19.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
19.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
19.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
18.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
18.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
18.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
18.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
18.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
17.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
17.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
17.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
16.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
16.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
15.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
15.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
15.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
14.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
14.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
14.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
13.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
13.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
12.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
11.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
10.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRAF7 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
61.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
47.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
47.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
44.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
42.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
42.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
41.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
41.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
40.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
39.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
39.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
39.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
38.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
37.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
37.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
37.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
37.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
36.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
36.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
35.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
35.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
35.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
34.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
34.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
34.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
34.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
34.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
33.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
33.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
33.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
33.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
33.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
33.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
33.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
32.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
32.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
32.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
31.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
31.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
31.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
31.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
31.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
30.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
30.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
30.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
30.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
30.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
30.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
30.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
30.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
30.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
30.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
29.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
29.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
29.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
29.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
29.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
29.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
28.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
28.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
28.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
28.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
28.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
28.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
28.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
28.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
27.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
27.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
27.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
27.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
27.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
27.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
27.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
27.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
27.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
27.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
27.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
27.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
27.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
27.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
26.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
26.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
26.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
26.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
26.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
26.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
26.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
26.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
26.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
26.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
26.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
26.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
26.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
25.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
25.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
25.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
25.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
25.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
25.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
25.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
25.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
25.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
25.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
25.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
25.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
25.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
24.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
24.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
24.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
24.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
24.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
24.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
24.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
24.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
24.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
24.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
24.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
24.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
24.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
24.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
24.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
23.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
23.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
23.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
23.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
23.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
23.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
23.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
23.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
23.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
23.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
23.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
23.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
23.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
23.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
23.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
23.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
23.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
23.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
23.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
23.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
23.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
23.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
22.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
22.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
22.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
22.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
22.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
22.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
22.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
22.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
22.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
22.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
22.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
22.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
22.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
22.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
22.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
22.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
22.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
22.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
22.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
22.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
22.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
22.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
22.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
22.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
22.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
22.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
21.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
21.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
21.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
21.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
21.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
21.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
21.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
21.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
21.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
21.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
21.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
21.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
21.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
21.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
21.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
21.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
21.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
21.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
21.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
21.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
21.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
21.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
21.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
21.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
21.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
21.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
21.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
21.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
20.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
20.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
20.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
20.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
20.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
20.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
20.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
20.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
20.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
20.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
20.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
20.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
20.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
20.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
20.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
20.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
20.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
20.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
20.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
20.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
20.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
20.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
20.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
20.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
20.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
20.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
20.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
20.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
20.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
20.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
20.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
20.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
20.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
20.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
20.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
20.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
20.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
20.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
20.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
20.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
19.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
19.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
19.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
19.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
19.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
19.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
19.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
19.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
19.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
19.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
19.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
19.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
19.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
19.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
19.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
19.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
19.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
19.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
19.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
19.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
19.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
19.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
19.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
19.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
19.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
19.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
19.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
19.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
19.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
19.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
19.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
19.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
19.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
19.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
19.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
18.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
18.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
18.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
18.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
18.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
18.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
18.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
18.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
18.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
18.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
18.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
18.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
18.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
18.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
18.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
18.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
18.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
18.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
18.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
18.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
18.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
18.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
18.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
18.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
18.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
18.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
18.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
18.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
18.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
18.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
18.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
18.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
18.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
18.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
18.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
18.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
18.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
18.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
18.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
18.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
18.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
18.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
18.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
18.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
18.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
17.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
17.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
17.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
17.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
17.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
17.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
17.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
17.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
17.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
17.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
17.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
17.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
17.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
17.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
17.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
17.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
17.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
17.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
17.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
17.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
17.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
17.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
17.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
17.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
17.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
17.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
17.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
17.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
17.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
17.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
17.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
17.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
17.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
17.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
17.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
17.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
17.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
17.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
17.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
16.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
16.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
16.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
16.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
16.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
16.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
16.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
16.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
16.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
16.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
16.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
16.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
16.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
16.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
16.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
16.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
16.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
16.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
16.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
16.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
16.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
16.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
16.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
16.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
16.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
16.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
16.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
16.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
16.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
16.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
16.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
16.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
16.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
16.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
16.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
16.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
15.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
15.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
15.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
15.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
15.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
15.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
15.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
15.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
15.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
15.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
15.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
15.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
15.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
15.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
15.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
15.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
15.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
15.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
15.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
15.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
15.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
15.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
15.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
15.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
15.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
15.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
15.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
15.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
15.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
14.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
14.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
14.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
14.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
14.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
14.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
14.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
14.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
14.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
14.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
14.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
14.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
14.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
14.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
14.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
14.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
14.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
14.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
14.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
14.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
14.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
13.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
13.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
13.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
13.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
13.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
13.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
13.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
13.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
13.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
13.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
13.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
13.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
13.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
13.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
13.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
13.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
13.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
13.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
13.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
13.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
13.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
13.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
12.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
12.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
12.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
12.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
12.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
12.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
12.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
12.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
12.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
12.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
12.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
12.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
12.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
12.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
12.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
12.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
12.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
12.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
12.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
11.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
11.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
11.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
11.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
11.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
11.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
11.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
11.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
11.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
11.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
11.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
11.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
10.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
10.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
10.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
10.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
10.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
10.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
10.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
10.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
10.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
10.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
9.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
9.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
9.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
9.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
9.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
9.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
8.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
8.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
8.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
7.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
5.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
5.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
4.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
3.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
3.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRAF7 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
58.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
41.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
41.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
38.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
38.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
37.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
36.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
36.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
36.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
36.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
35.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
34.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
34.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
34.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
32.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
32.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
31.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
31.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
31.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
30.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
30.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
28.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
27.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
27.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
26.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
26.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
26.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
26.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
25.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
25.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
25.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
25.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
25.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
25.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
25.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
24.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
24.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
24.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
24.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
24.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
23.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
23.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
23.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
23.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
22.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
22.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
22.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
22.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
22.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
22.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
22.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
22.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
21.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
21.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
21.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
21.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
20.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
20.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
20.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
20.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
20.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
20.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
20.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
20.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
19.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
19.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
19.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
19.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
19.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
18.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
18.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
18.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
18.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
18.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
18.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
18.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
17.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
17.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
17.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
17.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
17.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
16.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
16.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
16.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
16.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
16.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
16.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
16.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
15.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
15.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
14.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
14.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
14.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
13.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
13.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
12.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
12.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
12.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
10.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRAF7 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
91.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
90.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
90.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
84.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
84.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
79.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
78.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
77.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
73.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
73.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
70.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
69.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
68.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
67.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
67.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
67.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
66.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
65.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
65.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
65.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
65.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
64.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
64.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
63.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
60.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
60.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
59.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
59.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
59.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
58.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
57.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
56.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
56.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
56.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
55.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
55.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
55.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
54.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
54.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
54.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
53.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
53.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
52.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
52.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
51.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
51.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
51.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
50.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
50.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
50.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
50.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
50.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
48.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
48.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
48.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
48.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
48.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
48.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
48.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
48.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
47.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
47.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
47.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
47.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
47.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
46.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
46.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
46.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
46.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
46.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
46.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
46.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
46.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
45.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
45.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
45.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
45.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
45.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
44.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
44.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
44.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
44.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
44.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
43.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
43.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
43.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
43.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
43.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
43.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
43.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
43.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
43.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
42.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
42.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
42.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
42.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
41.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
41.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
41.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
41.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
41.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
41.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
40.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
40.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
40.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
40.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
40.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
40.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
40.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
40.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
40.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
40.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
39.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
39.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
39.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
39.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
39.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
39.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
39.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
39.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
39.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
39.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
39.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
38.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
38.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
37.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
37.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
37.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
37.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
37.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
37.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
37.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
37.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
37.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
37.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
37.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
36.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
36.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
36.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
36.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
35.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
35.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
35.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
35.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
35.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
35.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
35.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
35.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
35.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
34.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
34.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
34.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
34.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
34.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
34.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
34.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
34.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
34.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
34.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
34.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
33.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
33.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
33.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
33.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
33.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
33.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
33.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
33.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
32.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
32.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
32.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
32.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
32.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
32.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
32.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
32.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
32.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
32.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
32.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
31.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
31.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
31.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
31.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
31.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
31.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
31.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
31.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
30.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
30.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
30.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
30.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
30.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
30.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
30.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
30.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
30.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
29.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
29.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
29.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
29.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
29.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
29.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
28.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
28.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
28.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
28.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
28.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
28.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
28.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
28.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
28.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
28.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
28.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
28.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
28.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
28.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
28.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
27.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
27.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
27.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
27.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
27.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
27.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
27.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
26.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
26.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
26.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
26.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
26.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
26.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
26.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
26.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
25.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
25.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
25.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
25.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
25.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
24.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
24.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
23.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
23.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
23.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
23.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
23.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
23.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
23.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
23.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
23.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
22.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
22.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
22.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
21.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
21.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
21.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
21.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
20.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
20.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
20.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
20.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
20.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
19.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
19.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
19.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
19.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
19.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
18.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
17.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
17.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
17.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
16.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
16.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
15.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
15.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
15.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
14.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
14.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
14.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
13.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
9.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
9.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
7.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
5.2
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078510003
Tumor
1.4
CPT0081880003
Tumor
0.9
CPT0025290003
Tumor
0.8
CPT0025170003
Tumor
0.8
CPT0012550003
Tumor
0.6
CPT0089020003
Tumor
0.6
CPT0015730003
Tumor
0.6
CPT0017410003
Tumor
0.5
CPT0066480003
Tumor
0.5
CPT0065690003
Tumor
0.5
CPT0065930003
Tumor
0.4
CPT0086030003
Tumor
0.4
CPT0064370003
Tumor
0.4
CPT0092790003
Tumor
0.3
CPT0065750003
Tumor
0.3
CPT0011240003
Tumor
0.3
CPT0023350003
Tumor
0.3
CPT0012080003
Tumor
0.3
CPT0001500009
Tumor
0.3
CPT0078930003
Tumor
0.3
CPT0079300001
Normal
0.3
CPT0014160003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0077490003
Tumor
0.3
CPT0012670003
Tumor
0.3
CPT0017450001
Normal
0.3
CPT0015810003
Tumor
0.3
CPT0063320003
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0012280003
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0088500001
Normal
0.3
CPT0078530001
Normal
0.3
CPT0088900003
Tumor
0.3
CPT0092190003
Normal
0.3
CPT0075560003
Tumor
0.3
CPT0017850003
Tumor
0.3
CPT0001260009
Tumor
0.3
CPT0015910003
Tumor
0.2
CPT0078660003
Tumor
0.2
CPT0007860003
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0012770003
Normal
0.2
CPT0009060003
Tumor
0.2
CPT0089040001
Normal
0.2
CPT0075720003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0076330003
Tumor
0.2
CPT0002270011
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0009020003
Normal
0.2
CPT0025350003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0001270001
Normal
0.2
CPT0006900003
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0019160001
Normal
0.1
CPT0024680001
Normal
0.1
CPT0025580004
Tumor
0.1
CPT0078840001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0088760003
Tumor
0.1
CPT0009080003
Normal
0.1
CPT0086360003
Tumor
0.1
CPT0086970003
Normal
0.1
CPT0021240003
Tumor
0.1
CPT0076350001
Normal
0.1
CPT0011410003
Tumor
0.1
CPT0012570003
Normal
0.1
CPT0066430001
Normal
0.1
CPT0012900004
Tumor
0.1
CPT0020020001
Normal
0.1
CPT0026410003
Tumor
0.1
CPT0014350001
Normal
0.1
CPT0087050003
Normal
0.1
CPT0000890001
Normal
0.1
CPT0063640001
Normal
0.1
CPT0012920003
Normal
0.1
CPT0014370004
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0001340003
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0006440003
Tumor
0.1
CPT0092160003
Tumor
0.0
CPT0077310003
Tumor
0.0
CPT0023360001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0066470004
Tumor
0.0
CPT0075570001
Normal
0.0
CPT0065430003
Tumor
0.0
CPT0010110003
Tumor
0.0
CPT0065450001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0000780007
Tumor
0.0
CPT0024670003
Tumor
0.0
CPT0077140001
Normal
0.0
CPT0079180003
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0089460004
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0063630003
Tumor
0.0
CPT0077500001
Normal
0.0
CPT0077320001
Normal
0.0
CPT0079270003
Tumor
0.0
CPT0079510001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0000640003
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0081600003
Tumor
0.0
CPT0025230003
Tumor
-0.1
CPT0001180009
Tumor
-0.1
CPT0012640003
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0079230003
Tumor
-0.1
CPT0014450004
Tumor
-0.1
CPT0001550001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0081990003
Tumor
-0.1
CPT0078940001
Normal
-0.1
CPT0087040003
Tumor
-0.1
CPT0023710001
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0088690003
Tumor
-0.1
CPT0010160003
Tumor
-0.1
CPT0065820001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0001540009
Tumor
-0.1
CPT0000660001
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0012370003
Tumor
-0.1
CPT0078800003
Tumor
-0.1
CPT0079430001
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0092290003
Tumor
-0.1
CPT0012180003
Tumor
-0.2
CPT0063330001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0019130003
Tumor
-0.2
CPT0012290003
Normal
-0.2
CPT0086890003
Normal
-0.2
CPT0025110003
Tumor
-0.2
CPT0086950003
Tumor
-0.2
CPT0002350011
Tumor
-0.2
CPT0006950001
Normal
-0.2
CPT0010120001
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0088550004
Tumor
-0.2
CPT0012090003
Normal
-0.2
CPT0019990003
Tumor
-0.2
CPT0088630003
Tumor
-0.2
CPT0077110003
Tumor
-0.2
CPT0086870003
Tumor
-0.2
CPT0014470001
Normal
-0.2
CPT0078670001
Normal
-0.2
CPT0014130001
Normal
-0.3
CPT0085670003
Tumor
-0.3
CPT0088970003
Tumor
-0.3
CPT0089480003
Normal
-0.3
CPT0026420001
Normal
-0.3
CPT0088570001
Normal
-0.3
CPT0071150004
Tumor
-0.4
CPT0001350001
Normal
-0.4
CPT0001220008
Tumor
-0.4
CPT0088480003
Tumor
-0.4
CPT0001190001
Normal
-0.4
CPT0082010001
Normal
-0.5
CPT0025060001
Normal
-0.5
CPT0001230001
Normal
-0.5
CPT0025050003
Tumor
-0.7
CPT0092310003
Normal
-0.8
CPT0025880003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0069010001
Normal
N/A
CPT0069160003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0069190001
Normal
N/A
CPT0069000003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0007470001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0065870003
Tumor
N/A
CPT0092740003
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
