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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MGAT1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
67.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
209.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
193.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
155.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
136.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
135.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
108.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
105.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
103.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
103.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
100.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
97.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
97.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
94.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
91.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
90.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
86.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
85.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
79.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
75.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
74.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
72.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
72.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
69.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
67.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
65.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
63.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
61.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
61.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
59.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
58.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
58.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
57.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
56.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
55.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
54.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
54.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
52.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
52.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
52.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
50.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
49.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
47.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
46.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
45.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
45.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
45.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
44.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
44.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
35.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
34.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
34.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
34.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
34.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
33.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
33.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
31.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
31.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
31.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
30.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
30.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
30.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
29.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
25.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MGAT1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
88.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
318.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
164.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
162.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
161.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
160.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
154.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
153.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
152.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
150.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
148.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
147.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
146.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
146.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
145.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
144.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
144.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
143.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
142.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
142.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
141.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
141.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
141.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
140.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
140.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
139.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
139.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
139.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
138.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
138.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
136.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
136.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
135.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
135.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
135.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
135.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
134.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
133.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
133.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
133.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
132.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
132.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
131.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
131.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
130.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
130.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
130.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
130.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
130.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
129.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
129.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
129.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
129.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
128.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
128.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
128.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
127.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
126.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
126.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
126.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
125.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
123.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
123.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
123.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
123.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
123.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
122.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
122.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
122.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
122.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
122.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
122.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
122.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
121.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
121.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
120.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
120.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
120.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
119.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
119.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
119.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
119.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
118.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
118.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
118.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
118.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
118.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
117.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
117.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
117.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
116.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
116.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
116.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
116.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
116.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
116.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
115.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
115.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
115.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
115.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
114.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
114.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
113.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
113.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
113.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
113.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
113.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
113.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
113.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
113.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
113.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
112.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
112.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
112.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
112.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
112.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
111.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
111.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
111.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
111.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
110.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
110.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
110.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
110.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
109.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
109.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
108.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
108.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
108.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
108.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
108.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
108.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
108.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
108.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
108.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
108.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
107.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
107.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
107.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
106.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
106.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
106.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
106.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
106.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
106.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
105.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
105.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
105.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
105.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
105.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
104.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
104.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
104.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
104.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
104.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
103.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
103.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
103.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
103.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
103.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
103.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
103.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
103.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
103.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
103.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
102.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
102.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
102.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
102.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
101.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
101.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
101.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
101.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
101.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
100.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
100.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
100.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
100.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
100.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
100.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
100.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
99.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
99.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
98.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
98.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
98.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
97.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
97.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
97.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
97.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
97.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
97.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
96.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
96.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
96.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
96.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
96.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
96.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
96.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
96.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
95.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
95.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
95.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
95.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
95.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
95.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
95.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
95.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
95.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
95.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
95.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
95.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
94.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
94.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
94.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
94.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
93.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
93.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
93.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
93.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
93.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
93.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
93.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
93.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
93.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
93.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
92.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
92.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
92.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
92.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
92.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
92.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
91.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
91.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
91.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
91.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
91.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
91.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
90.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
90.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
90.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
90.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
90.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
90.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
90.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
89.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
89.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
89.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
89.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
88.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
88.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
88.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
88.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
88.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
88.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
88.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
88.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
87.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
87.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
87.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
87.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
87.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
87.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
87.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
87.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
87.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
87.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
86.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
86.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
86.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
86.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
86.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
86.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
86.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
86.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
85.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
85.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
85.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
85.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
84.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
84.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
84.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
84.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
83.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
83.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
83.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
83.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
83.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
83.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
83.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
82.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
82.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
82.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
82.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
82.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
82.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
82.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
82.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
82.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
81.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
81.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
81.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
81.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
81.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
81.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
80.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
80.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
80.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
80.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
80.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
79.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
79.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
79.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
78.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
78.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
78.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
78.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
78.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
78.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
78.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
78.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
77.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
77.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
77.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
77.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
77.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
77.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
77.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
77.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
77.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
77.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
77.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
76.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
76.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
76.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
76.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
76.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
76.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
76.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
76.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
76.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
76.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
75.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
75.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
75.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
75.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
75.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
75.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
75.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
74.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
74.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
74.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
73.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
73.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
73.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
73.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
73.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
73.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
73.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
73.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
73.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
73.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
73.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
73.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
72.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
72.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
72.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
72.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
72.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
72.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
72.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
72.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
71.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
71.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
71.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
71.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
71.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
71.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
70.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
70.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
70.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
70.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
69.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
69.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
69.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
69.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
69.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
68.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
68.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
68.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
67.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
67.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
67.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
67.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
67.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
66.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
66.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
66.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
66.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
66.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
66.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
66.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
66.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
65.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
65.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
65.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
65.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
65.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
65.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
64.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
64.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
64.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
64.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
64.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
63.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
63.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
63.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
63.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
63.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
63.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
63.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
63.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
62.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
62.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
62.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
62.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
62.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
61.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
61.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
61.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
61.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
60.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
60.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
60.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
60.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
59.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
59.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
59.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
59.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
59.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
59.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
59.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
59.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
59.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
58.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
58.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
58.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
57.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
57.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
57.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
57.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
56.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
56.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
56.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
56.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
56.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
56.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
56.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
55.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
55.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
55.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
55.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
55.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
54.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
54.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
54.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
54.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
53.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
53.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
53.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
53.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
53.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
52.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
52.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
52.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
52.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
51.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
50.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
50.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
49.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
49.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
47.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
47.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
47.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
46.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
46.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
46.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
46.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
46.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
45.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
45.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
44.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
44.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
43.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
43.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
42.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
41.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
41.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
40.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
40.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
39.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
39.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
38.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
37.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
36.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
36.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
36.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
36.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
36.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
34.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
32.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
31.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
31.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
31.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
29.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
29.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
26.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
25.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
24.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
24.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
21.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MGAT1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
100.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
214.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
199.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
185.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
155.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
153.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
148.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
142.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
138.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
136.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
134.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
133.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
133.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
132.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
130.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
126.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
125.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
125.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
125.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
123.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
123.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
122.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
122.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
122.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
121.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
121.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
121.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
119.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
118.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
117.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
116.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
116.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
115.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
115.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
114.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
114.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
114.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
113.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
113.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
109.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
109.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
106.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
104.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
104.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
104.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
102.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
102.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
102.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
102.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
101.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
100.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
100.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
99.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
99.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
99.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
98.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
98.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
96.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
96.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
95.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
93.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
90.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
90.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
88.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
87.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
86.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
86.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
86.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
86.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
86.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
85.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
85.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
84.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
82.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
82.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
81.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
81.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
80.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
79.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
77.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
76.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
75.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
75.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
73.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
70.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
69.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
69.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
68.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
66.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
65.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
62.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
62.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
57.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
54.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
45.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
44.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
41.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
40.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
39.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
34.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MGAT1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
62.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
220.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
214.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
198.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
171.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
166.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
163.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
156.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
154.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
139.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
135.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
133.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
132.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
130.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
129.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
129.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
128.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
124.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
124.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
123.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
118.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
117.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
114.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
114.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
114.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
110.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
109.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
108.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
107.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
105.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
104.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
103.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
103.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
103.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
102.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
101.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
99.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
97.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
95.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
92.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
91.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
90.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
90.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
90.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
90.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
90.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
87.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
87.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
86.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
86.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
85.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
85.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
85.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
85.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
85.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
85.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
83.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
83.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
83.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
83.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
82.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
80.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
80.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
80.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
80.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
80.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
79.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
78.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
77.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
77.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
77.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
76.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
75.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
75.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
74.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
73.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
73.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
73.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
73.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
72.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
72.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
72.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
72.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
71.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
71.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
70.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
70.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
69.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
69.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
69.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
68.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
68.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
68.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
68.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
67.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
66.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
66.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
65.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
65.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
65.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
64.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
64.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
64.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
64.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
64.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
64.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
63.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
63.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
63.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
63.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
62.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
62.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
62.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
62.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
61.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
61.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
61.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
60.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
60.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
60.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
59.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
59.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
59.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
59.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
59.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
58.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
58.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
58.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
58.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
58.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
58.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
58.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
57.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
57.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
57.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
56.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
56.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
56.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
55.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
55.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
55.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
53.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
53.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
53.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
53.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
52.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
52.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
51.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
50.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
50.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
50.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
50.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
50.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
50.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
49.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
49.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
49.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
48.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
48.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
48.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
47.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
47.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
47.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
47.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
47.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
47.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
46.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
46.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
46.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
46.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
45.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
45.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
45.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
45.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
45.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
45.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
45.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
45.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
45.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
45.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
45.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
45.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
44.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
44.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
43.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
43.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
43.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
43.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
43.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
43.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
43.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
43.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
42.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
42.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
41.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
41.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
41.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
41.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
41.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
41.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
41.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
40.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
40.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
40.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
40.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
40.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
40.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
39.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
39.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
39.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
39.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
39.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
39.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
38.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
37.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
37.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
37.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
37.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
36.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
36.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
36.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
36.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
36.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
36.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
35.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
35.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
35.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
35.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
35.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
35.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
35.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
35.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
34.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
34.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
34.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
33.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
33.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
33.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
32.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
32.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
32.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
32.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
31.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
31.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
31.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
31.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
31.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
30.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
30.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
30.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
29.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
29.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
29.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
29.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
29.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
29.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
29.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
29.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
29.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
28.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
28.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
28.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
28.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
27.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
27.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
27.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
26.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
25.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
25.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
24.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
24.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
24.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
23.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
23.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
23.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
22.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
21.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
20.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
18.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
14.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
14.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
13.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
13.3
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0076330003
Tumor
2.1
CPT0023350003
Tumor
1.3
CPT0069160003
Tumor
1.3
CPT0002350011
Tumor
1.2
CPT0088550004
Tumor
1.2
CPT0014160003
Tumor
1.1
CPT0015730003
Tumor
1.1
CPT0084560003
Tumor
1.1
CPT0086820003
Tumor
1.1
CPT0081880003
Tumor
1.0
CPT0020120003
Tumor
0.9
CPT0001340003
Tumor
0.8
CPT0065430003
Tumor
0.8
CPT0012180003
Tumor
0.8
CPT0063630003
Tumor
0.7
CPT0012280003
Tumor
0.7
CPT0025050003
Tumor
0.6
CPT0075130003
Tumor
0.6
CPT0025880003
Tumor
0.6
CPT0001540009
Tumor
0.6
CPT0010110003
Tumor
0.6
CPT0065810003
Tumor
0.6
CPT0007860003
Tumor
0.6
CPT0012670003
Tumor
0.6
CPT0079410003
Tumor
0.6
CPT0075560003
Tumor
0.6
CPT0086360003
Tumor
0.5
CPT0024670003
Tumor
0.5
CPT0079270003
Tumor
0.5
CPT0001180009
Tumor
0.5
CPT0001260009
Tumor
0.5
CPT0025290003
Tumor
0.5
CPT0092290003
Tumor
0.5
CPT0092730003
Tumor
0.5
CPT0088690003
Tumor
0.5
CPT0092160003
Tumor
0.4
CPT0078800003
Tumor
0.3
CPT0081600003
Tumor
0.3
CPT0015910003
Tumor
0.3
CPT0000640003
Tumor
0.3
CPT0088480003
Tumor
0.3
CPT0065750003
Tumor
0.2
CPT0026420001
Normal
0.2
CPT0064370003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0086950003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0001220008
Tumor
0.2
CPT0025110003
Tumor
0.2
CPT0066480003
Tumor
0.2
CPT0089020003
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0078510003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0007320003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0078990003
Tumor
0.1
CPT0078660003
Tumor
0.1
CPT0014370004
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0071150004
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0086030003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0085670003
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0078930003
Tumor
0.0
CPT0066470004
Tumor
0.0
CPT0065690003
Tumor
0.0
CPT0001500009
Tumor
0.0
CPT0019990003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0088630003
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0012370003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0077310003
Tumor
-0.1
CPT0063320003
Tumor
-0.1
CPT0006900003
Tumor
-0.1
CPT0088760003
Tumor
-0.1
CPT0023360001
Normal
-0.1
CPT0012550003
Tumor
-0.1
CPT0010160003
Tumor
-0.1
CPT0089460004
Tumor
-0.1
CPT0001350001
Normal
-0.1
CPT0009060003
Tumor
-0.1
CPT0012290003
Normal
-0.1
CPT0012080003
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0089040001
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0086870003
Tumor
-0.1
CPT0079510001
Normal
-0.2
CPT0079430001
Normal
-0.2
CPT0088920001
Normal
-0.2
CPT0023690003
Tumor
-0.2
CPT0009000003
Tumor
-0.2
CPT0026410003
Tumor
-0.2
CPT0086830003
Normal
-0.2
CPT0025230003
Tumor
-0.2
CPT0000780007
Tumor
-0.2
CPT0012900004
Tumor
-0.2
CPT0001190001
Normal
-0.2
CPT0006530001
Normal
-0.2
CPT0088570001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0006950001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0078530001
Normal
-0.2
CPT0018250001
Normal
-0.3
CPT0066430001
Normal
-0.3
CPT0025060001
Normal
-0.3
CPT0075720003
Tumor
-0.3
CPT0092190003
Normal
-0.3
CPT0069010001
Normal
-0.3
CPT0075170001
Normal
-0.3
CPT0014130001
Normal
-0.3
CPT0017450001
Normal
-0.3
CPT0000660001
Normal
-0.3
CPT0063330001
Normal
-0.3
CPT0014450004
Tumor
-0.3
CPT0089480003
Normal
-0.3
CPT0025580004
Tumor
-0.3
CPT0088710001
Normal
-0.3
CPT0000790001
Normal
-0.3
CPT0088640003
Normal
-0.3
CPT0012090003
Normal
-0.3
CPT0086970003
Normal
-0.3
CPT0006630003
Tumor
-0.3
CPT0017850003
Tumor
-0.3
CPT0078670001
Normal
-0.3
CPT0001510001
Normal
-0.3
CPT0077320001
Normal
-0.3
CPT0014350001
Normal
-0.3
CPT0006730001
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0010120001
Normal
-0.3
CPT0065450001
Normal
-0.3
CPT0088900003
Tumor
-0.4
CPT0011240003
Tumor
-0.4
CPT0001550001
Normal
-0.4
CPT0007470001
Normal
-0.4
CPT0066520001
Normal
-0.4
CPT0087050003
Normal
-0.4
CPT0019130003
Tumor
-0.4
CPT0000890001
Normal
-0.4
CPT0086890003
Normal
-0.4
CPT0021240003
Tumor
-0.4
CPT0086370003
Normal
-0.4
CPT0078940001
Normal
-0.4
CPT0065820001
Normal
-0.4
CPT0025610001
Normal
-0.4
CPT0075570001
Normal
-0.4
CPT0092800003
Normal
-0.4
CPT0063640001
Normal
-0.4
CPT0082010001
Normal
-0.4
CPT0064400001
Normal
-0.4
CPT0084590001
Normal
-0.4
CPT0014470001
Normal
-0.4
CPT0092740003
Normal
-0.4
CPT0079300001
Normal
-0.4
CPT0011410003
Tumor
-0.4
CPT0065930003
Tumor
-0.4
CPT0002270011
Tumor
-0.4
CPT0010170001
Normal
-0.4
CPT0001270001
Normal
-0.5
CPT0002370001
Normal
-0.5
CPT0078840001
Normal
-0.5
CPT0019160001
Normal
-0.5
CPT0092310003
Normal
-0.5
CPT0020130001
Normal
-0.5
CPT0077500001
Normal
-0.5
CPT0024680001
Normal
-0.5
CPT0025920001
Normal
-0.5
CPT0020020001
Normal
-0.5
CPT0012920003
Normal
-0.5
CPT0088780001
Normal
-0.6
CPT0017410003
Tumor
-0.6
CPT0001230001
Normal
-0.6
CPT0012770003
Normal
-0.6
CPT0009020003
Normal
-0.6
CPT0079000001
Normal
-0.7
CPT0079180003
Tumor
-0.7
CPT0012640003
Normal
-0.7
CPT0007870001
Normal
-0.7
CPT0023710001
Normal
-0.7
CPT0088970003
Tumor
-0.7
CPT0012570003
Normal
-0.7
CPT0009080003
Normal
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
