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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RFTN1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
4.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
22.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
20.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
16.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
14.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
12.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
10.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
10.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
9.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
9.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
7.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
7.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
7.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
7.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
6.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
6.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
6.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
5.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
5.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
5.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
5.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
5.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
4.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
4.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
4.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
4.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
4.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
4.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
4.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
4.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
4.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
3.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
3.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
3.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
3.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
3.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
3.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
3.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
3.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
2.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
2.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
2.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
2.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
2.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
2.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
2.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
2.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
2.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
2.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
2.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
2.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
2.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
1.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
1.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
1.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
1.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
1.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
1.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
1.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RFTN1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
75.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
74.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
73.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
72.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
70.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
68.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
67.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
67.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
67.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
66.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
66.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
63.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
62.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
61.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
60.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
60.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
59.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
59.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
59.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
58.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
58.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
58.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
58.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
57.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
57.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
57.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
56.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
56.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
55.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
55.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
55.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
54.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
54.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
53.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
53.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
52.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
52.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
52.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
52.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
52.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
51.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
51.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
51.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
51.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
50.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
50.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
50.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
50.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
50.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
49.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
49.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
49.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
49.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
49.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
49.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
49.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
49.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
48.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
48.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
48.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
48.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
47.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
47.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
47.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
47.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
46.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
46.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
46.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
46.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
46.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
46.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
46.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
46.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
46.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
46.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
45.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
45.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
45.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
45.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
44.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
44.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
44.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
44.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
44.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
44.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
44.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
43.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
43.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
43.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
43.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
43.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
43.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
43.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
42.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
42.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
42.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
42.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
42.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
42.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
41.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
41.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
41.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
41.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
41.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
41.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
41.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
40.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
40.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
40.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
40.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
40.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
40.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
40.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
40.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
40.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
40.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
40.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
40.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
39.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
39.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
39.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
39.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
39.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
39.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
39.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
39.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
39.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
39.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
39.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
38.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
38.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
38.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
38.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
38.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
38.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
38.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
38.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
38.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
38.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
38.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
37.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
37.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
37.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
37.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
37.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
37.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
37.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
37.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
37.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
37.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
37.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
37.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
37.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
37.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
37.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
36.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
36.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
36.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
36.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
36.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
36.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
36.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
36.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
36.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
36.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
36.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
36.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
35.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
35.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
35.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
35.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
35.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
35.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
35.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
35.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
35.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
35.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
35.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
35.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
35.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
34.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
34.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
34.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
34.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
34.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
34.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
34.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
34.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
34.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
34.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
34.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
33.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
33.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
33.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
33.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
33.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
33.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
33.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
33.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
33.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
33.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
33.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
33.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
33.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
33.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
33.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
33.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
33.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
33.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
33.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
33.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
33.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
33.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
32.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
32.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
32.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
32.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
32.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
32.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
32.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
32.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
32.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
32.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
32.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
31.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
31.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
31.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
31.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
31.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
31.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
31.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
31.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
31.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
31.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
31.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
31.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
31.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
30.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
30.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
30.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
30.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
30.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
30.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
30.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
30.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
30.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
30.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
30.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
30.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
29.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
29.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
29.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
29.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
29.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
29.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
29.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
29.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
28.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
28.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
28.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
28.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
28.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
28.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
28.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
28.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
28.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
28.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
28.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
28.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
28.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
28.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
27.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
27.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
27.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
27.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
27.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
27.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
27.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
27.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
27.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
27.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
27.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
27.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
27.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
27.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
27.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
27.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
26.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
26.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
26.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
26.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
26.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
26.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
26.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
26.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
26.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
26.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
26.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
26.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
26.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
26.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
25.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
25.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
25.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
25.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
25.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
25.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
25.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
25.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
25.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
25.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
25.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
25.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
25.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
25.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
25.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
24.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
24.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
24.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
24.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
24.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
24.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
24.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
24.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
24.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
24.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
24.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
24.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
24.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
23.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
23.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
23.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
23.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
23.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
23.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
23.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
23.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
23.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
23.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
23.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
23.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
23.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
23.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
23.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
23.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
23.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
23.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
22.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
22.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
22.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
22.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
22.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
22.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
22.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
22.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
22.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
22.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
22.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
22.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
22.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
22.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
22.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
22.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
22.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
21.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
21.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
21.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
21.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
21.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
21.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
21.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
21.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
21.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
21.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
21.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
21.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
21.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
21.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
21.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
21.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
21.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
21.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
21.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
20.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
20.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
20.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
20.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
20.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
20.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
20.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
20.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
20.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
20.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
20.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
20.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
19.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
19.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
19.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
19.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
19.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
19.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
19.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
19.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
19.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
19.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
19.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
19.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
18.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
18.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
18.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
18.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
18.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
18.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
18.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
18.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
18.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
18.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
18.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
17.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
17.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
17.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
17.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
17.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
17.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
17.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
17.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
16.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
16.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
16.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
16.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
16.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
16.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
16.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
16.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
16.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
16.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
15.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
15.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
15.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
15.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
14.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
14.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
14.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
14.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
14.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
13.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
13.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
13.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
13.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
13.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
13.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
13.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
13.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
13.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
13.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
12.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
12.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
12.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
12.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
12.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
12.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
12.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
11.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
11.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
11.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
11.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
11.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
11.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
11.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
11.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
11.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
11.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
11.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
10.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
10.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
10.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
10.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
10.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
10.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
10.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
9.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
9.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
8.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
8.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
8.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
8.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
8.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
8.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
8.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
8.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
8.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
7.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
7.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
7.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
7.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
7.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
7.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
6.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
6.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
6.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
6.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
6.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
5.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
5.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
5.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
5.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
5.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
4.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
4.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
4.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
3.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
3.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
3.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
2.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
2.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
2.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
2.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
1.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RFTN1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
75.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
71.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
62.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
56.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
54.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
53.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
53.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
52.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
52.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
46.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
46.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
45.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
45.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
45.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
44.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
44.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
44.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
44.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
43.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
43.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
42.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
42.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
41.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
40.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
40.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
39.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
39.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
38.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
36.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
36.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
36.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
36.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
36.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
35.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
34.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
33.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
31.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
31.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
30.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
29.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
29.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
29.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
28.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
28.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
28.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
28.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
27.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
26.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
26.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
25.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
25.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
25.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
25.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
25.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
24.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
24.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
24.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
24.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
23.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
23.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
23.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
22.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
22.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
22.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
22.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
21.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
20.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
20.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
20.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
19.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
19.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
18.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
17.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
17.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
17.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
16.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
16.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
16.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
15.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
15.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
15.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
14.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
14.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
14.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
13.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
13.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
12.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
11.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
10.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
8.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
8.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
8.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
7.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
7.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
5.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
5.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
5.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
3.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
2.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RFTN1 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
116.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
103.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
67.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
63.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
55.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
51.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
49.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
48.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
48.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
44.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
43.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
37.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
32.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
31.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
30.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
29.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
28.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
28.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
26.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
26.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
25.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
25.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
25.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
24.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
24.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
24.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
24.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
24.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
23.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
22.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
21.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
20.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
20.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
20.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
20.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
20.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
20.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
19.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
19.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
19.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
18.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
18.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
17.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
17.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
17.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
17.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
16.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
16.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
16.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
16.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
15.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
15.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
15.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
15.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
14.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
14.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
13.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
13.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
13.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
13.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
13.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
13.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
12.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
12.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
12.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
12.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
12.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
11.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
11.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
10.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
10.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
10.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
10.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
10.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
10.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
9.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
9.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
9.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
9.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
9.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
9.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
9.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
8.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
8.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
8.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
8.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
8.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
8.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
8.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
8.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
8.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
8.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
8.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
8.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
8.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
8.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
8.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
7.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
7.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
7.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
7.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
7.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
7.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
6.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
6.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
6.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
6.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
6.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
6.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
6.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
6.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
5.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
5.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
5.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
5.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
5.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
5.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
5.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
5.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
5.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
5.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
5.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
5.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
5.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
5.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
5.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
5.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
5.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
5.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
5.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
5.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
5.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
4.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
4.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
4.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
4.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
4.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
4.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
4.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
4.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
4.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
4.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
4.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
4.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
4.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
4.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
4.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
4.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
4.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
4.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
4.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
4.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
4.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
3.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
3.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
3.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
3.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
3.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
3.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
3.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
3.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
3.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
3.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
3.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
3.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
3.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
3.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
3.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
3.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
3.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
3.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
3.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
3.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
3.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
3.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
3.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
3.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
3.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
3.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
3.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
3.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
3.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
3.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
3.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
3.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
3.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
2.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
2.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
2.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
2.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
2.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
2.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
2.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
2.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
2.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
2.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
2.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
2.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
2.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
2.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
2.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
2.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
2.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
2.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
2.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
2.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
2.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
2.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
2.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
2.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
2.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
2.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
2.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
2.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
2.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
2.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
2.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
2.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
2.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
2.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
2.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
2.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
2.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
2.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
2.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
2.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
2.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
2.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
2.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
2.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
2.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
1.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
1.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
1.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
1.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
1.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
1.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
1.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
1.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
1.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
1.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
1.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
1.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
1.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
1.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
1.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
1.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
1.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
1.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
1.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
1.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
1.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
1.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
1.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
0.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
0.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
0.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
0.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
0.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
0.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
0.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0015730003
Tumor
1.3
CPT0088760003
Tumor
1.2
CPT0086360003
Tumor
1.2
CPT0007320003
Tumor
1.1
CPT0025050003
Tumor
0.9
CPT0011410003
Tumor
0.8
CPT0015910003
Tumor
0.8
CPT0066480003
Tumor
0.8
CPT0000640003
Tumor
0.8
CPT0075560003
Tumor
0.8
CPT0017850003
Tumor
0.8
CPT0086030003
Tumor
0.8
CPT0025350003
Tumor
0.7
CPT0012180003
Tumor
0.7
CPT0065430003
Tumor
0.7
CPT0092730003
Tumor
0.7
CPT0078990003
Tumor
0.7
CPT0081880003
Tumor
0.6
CPT0011240003
Tumor
0.6
CPT0001180009
Tumor
0.6
CPT0077490003
Tumor
0.6
CPT0088900003
Tumor
0.6
CPT0079230003
Tumor
0.6
CPT0084560003
Tumor
0.6
CPT0001540009
Tumor
0.6
CPT0010110003
Tumor
0.5
CPT0087040003
Tumor
0.5
CPT0081990003
Tumor
0.5
CPT0075130003
Tumor
0.5
CPT0025880003
Tumor
0.5
CPT0079480003
Tumor
0.5
CPT0066470004
Tumor
0.5
CPT0020120003
Tumor
0.5
CPT0079410003
Tumor
0.5
CPT0079380003
Tumor
0.5
CPT0001260009
Tumor
0.4
CPT0088630003
Tumor
0.4
CPT0089020003
Tumor
0.4
CPT0078930003
Tumor
0.4
CPT0012280003
Tumor
0.4
CPT0077320001
Normal
0.4
CPT0025170003
Tumor
0.4
CPT0065870003
Tumor
0.4
CPT0001270001
Normal
0.4
CPT0015810003
Tumor
0.4
CPT0092790003
Tumor
0.4
CPT0065750003
Tumor
0.3
CPT0065690003
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0069000003
Tumor
0.3
CPT0010160003
Tumor
0.3
CPT0025290003
Tumor
0.3
CPT0085670003
Tumor
0.3
CPT0092160003
Tumor
0.3
CPT0014160003
Tumor
0.3
CPT0023690003
Tumor
0.3
CPT0088550004
Tumor
0.3
CPT0075720003
Tumor
0.3
CPT0065820001
Normal
0.3
CPT0084590001
Normal
0.2
CPT0002350011
Tumor
0.2
CPT0063630003
Tumor
0.2
CPT0001220008
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0019990003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0000780007
Tumor
0.2
CPT0017410003
Tumor
0.2
CPT0078830003
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0025580004
Tumor
0.1
CPT0014370004
Tumor
0.1
CPT0075170001
Normal
0.1
CPT0025230003
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0064370003
Tumor
0.1
CPT0007860003
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0006630003
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0088570001
Normal
0.1
CPT0077140001
Normal
0.1
CPT0013790003
Normal
0.0
CPT0081600003
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0012080003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0082010001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0065930003
Tumor
0.0
CPT0026410003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0023350003
Tumor
0.0
CPT0021240003
Tumor
0.0
CPT0010120001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0088690003
Tumor
-0.1
CPT0079510001
Normal
-0.1
CPT0078530001
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0012550003
Tumor
-0.1
CPT0092290003
Tumor
-0.1
CPT0069190001
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0012900004
Tumor
-0.2
CPT0000660001
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0092190003
Normal
-0.2
CPT0088970003
Tumor
-0.2
CPT0010170001
Normal
-0.2
CPT0001190001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0071150004
Tumor
-0.2
CPT0006900003
Tumor
-0.2
CPT0079270003
Tumor
-0.2
CPT0089040001
Normal
-0.2
CPT0063330001
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0066430001
Normal
-0.2
CPT0019160001
Normal
-0.2
CPT0012920003
Normal
-0.3
CPT0092310003
Normal
-0.3
CPT0086970003
Normal
-0.3
CPT0006530001
Normal
-0.3
CPT0024680001
Normal
-0.3
CPT0087050003
Normal
-0.3
CPT0025610001
Normal
-0.3
CPT0088920001
Normal
-0.3
CPT0017450001
Normal
-0.3
CPT0009060003
Tumor
-0.3
CPT0086830003
Normal
-0.3
CPT0079430001
Normal
-0.3
CPT0012640003
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0092800003
Normal
-0.3
CPT0020020001
Normal
-0.3
CPT0086820003
Tumor
-0.3
CPT0006950001
Normal
-0.3
CPT0020130001
Normal
-0.3
CPT0078510003
Tumor
-0.3
CPT0086950003
Tumor
-0.4
CPT0065450001
Normal
-0.4
CPT0023710001
Normal
-0.4
CPT0002370001
Normal
-0.4
CPT0025920001
Normal
-0.4
CPT0088780001
Normal
-0.4
CPT0009020003
Normal
-0.4
CPT0092740003
Normal
-0.4
CPT0001230001
Normal
-0.4
CPT0000790001
Normal
-0.4
CPT0012770003
Normal
-0.4
CPT0009000003
Tumor
-0.4
CPT0078940001
Normal
-0.4
CPT0026420001
Normal
-0.4
CPT0079300001
Normal
-0.4
CPT0012570003
Normal
-0.4
CPT0019130003
Tumor
-0.4
CPT0006730001
Normal
-0.4
CPT0069010001
Normal
-0.4
CPT0001550001
Normal
-0.5
CPT0014350001
Normal
-0.5
CPT0001350001
Normal
-0.5
CPT0006440003
Tumor
-0.5
CPT0086370003
Normal
-0.5
CPT0007870001
Normal
-0.5
CPT0025110003
Tumor
-0.5
CPT0069160003
Tumor
-0.5
CPT0086890003
Normal
-0.5
CPT0088640003
Normal
-0.5
CPT0001500009
Tumor
-0.5
CPT0078670001
Normal
-0.5
CPT0064400001
Normal
-0.6
CPT0079000001
Normal
-0.6
CPT0009080003
Normal
-0.6
CPT0024670003
Tumor
-0.6
CPT0078840001
Normal
-0.6
CPT0001340003
Tumor
-0.6
CPT0077110003
Tumor
-0.6
CPT0089480003
Normal
-0.6
CPT0076330003
Tumor
-0.7
CPT0002270011
Tumor
-1.0
CPT0078800003
Tumor
-1.1
CPT0078660003
Tumor
-1.1
CPT0079180003
Tumor
-1.3
CPT0014450004
Tumor
-1.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
