HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:20.7 nTPM
HPA Brain:19.6 nTPM
GTEx:20.7 nTPM
FANTOM5:53.9 Scaled Tags Per Million
Pig:18.9 nTPM
Mouse:7.7 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043490
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 19.6
Sample id Sample description nTPM
Hippocampus
nTPM: 14.5
1911 Female, age 85, right hemisphere 18.4
1898 Male, age 80, left hemisphere 16.9
2148 Female, age 91, left hemisphere 14.5
1855 Male, age 76, left hemisphere 13.4
2529 Female, age 94, left hemisphere 12.4
2621 Female, age 67, right hemisphere 11.4
Dentate gyrus
nTPM: 16.7
1927 Female, age 91, both hemispheres 19.7
2010 Male, age 76, both hemispheres 18.3
2531 Female, age 67, both hemispheres 17.9
2246 Female, age 85, both hemispheres 15.8
2528 Male, age 74, both hemispheres 15.8
2530 Female, age 94, left hemisphere 12.3
Entorhinal gyrus
nTPM: 16.5
2613 Female, age 94, left hemisphere 17.6
2686 Male, age 75, right hemisphere 17.3
2764 Male, age 80, right hemisphere 16.7
1787 Male, age 76, left hemisphere 16.2
2117 Female, age 91, right hemisphere 15.9
1938 Female, age 85, left hemisphere 15.1
Hippocampus, CA1
nTPM: 17.5
2045 Male, age 76, both hemispheres 22.2
2749 Male, age 80, left hemisphere 19.3
1873 Female, age 85, both hemispheres 18.8
2082 Female, age 91, right hemisphere 14.2
2527 Male, age 74, both hemispheres 12.8
Hippocampus, CA2
nTPM: 17.3
2249 Male, age 74, both hemispheres 20.5
2113 Female, age 91, right hemisphere 17.9
1892 Male, age 76, both hemispheres 17.4
1963 Male, age 80, left hemisphere 16.6
1940 Female, age 85, left hemisphere 16.5
2437 Female, age 94, left hemisphere 14.9
Hippocampus, CA3
nTPM: 16.3
2620 Female, age 94, left hemisphere 20.1
1867 Male, age 76, both hemispheres 18.2
1891 Female, age 85, both hemispheres 16.8
2436 Male, age 74, both hemispheres 16.0
2137 Male, age 80, left hemisphere 13.9
2861 Female, age 67, both hemispheres 12.8
Parahippocampal cortex
nTPM: 17.5
2018 Male, age 76, both hemispheres 22.3
1990 Female, age 91, right hemisphere 21.5
1933 Female, age 85, both hemispheres 19.7
2532 Female, age 72, left hemisphere 19.4
2250 Female, age 67, right hemisphere 19.2
1850 Male, age 80, both hemispheres 17.7
2245 Female, age 91, both hemispheres 17.6
2693 Female, age 94, both hemispheres 15.9
2692 Male, age 74, both hemispheres 12.9
2622 Female, age 67, right hemisphere 9.0
Perirhinal gyrus
nTPM: 19.6
1847 Female, age 91, left hemisphere 23.0
2521 Female, age 94, right hemisphere 21.3
1794 Male, age 80, right hemisphere 19.7
1841 Female, age 85, right hemisphere 19.4
2848 Male, age 76, right hemisphere 14.7
Subiculum
nTPM: 14.1
2042 Male, age 76, both hemispheres 17.5
1977 Female, age 85, both hemispheres 17.4
2729 Female, age 91, right hemisphere 17.4
1901 Male, age 80, both hemispheres 16.4
2619 Male, age 74, both hemispheres 12.3
2438 Female, age 94, left hemisphere 3.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 20.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.7
Samples: 197

Max nTPM: 33.8
Min nTPM: 11.1
Std nTPM: 4.5
Median nTPM: 20.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 33.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 31.8
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 31.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 29.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 28.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 28.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 28.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 28.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 28.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 28.2
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 27.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 53.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.9
FF:10169-103B7 60 years, female 60.2
FF:10153-102I9 76 years, female 47.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 18.9
Pig sample Sample description nTPM
Subiculum
nTPM: 17.6
Samples: 4

Max nTPM: 21.9
Min nTPM: 15.0
Sample A Female 21.9
Sample B Female 16.8
Sample C Male 16.8
Sample D Male 15.0
Dorsal hippocampus
nTPM: 18.9
Samples: 4

Max nTPM: 23.4
Min nTPM: 14.3
Sample A Female 23.4
Sample B Female 17.4
Sample C Male 20.6
Sample D Male 14.3
Entorhinal cortex
nTPM: 16.1
Samples: 4

Max nTPM: 20.4
Min nTPM: 12.9
Sample A Female 15.8
Sample B Female 20.4
Sample C Male 15.1
Sample D Male 12.9
Ventral hippocampus
nTPM: 17.4
Samples: 4

Max nTPM: 20.5
Min nTPM: 14.5
Sample A Female 18.6
Sample B Female 15.8
Sample C Male 20.5
Sample D Male 14.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 7.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.7
Samples: 4

Max nTPM: 8.8
Min nTPM: 6.9
Sample A Male 6.9
Sample B Male 7.6
Sample C Female 7.6
Sample D Female 8.8
Hippocampal formation
nTPM: 7.1
Samples: 4

Max nTPM: 8.0
Min nTPM: 6.5
Sample A Male 8.0
Sample B Male 6.7
Sample C Female 7.3
Sample D Female 6.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
70546215 Antisense, RP_050623_03_G06, Mouse strain C57BL/6J (56 days, male) 0.4

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