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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COX4I1 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
384.2
Number of samples
349
Samples
Sample
Description
TPM
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
1231.5
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
1144.6
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
1102.9
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
1019.1
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
960.6
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
932.3
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
929.6
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
900.2
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
838.3
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
837.5
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
812.2
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
805.0
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
773.2
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
738.3
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
724.0
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
712.7
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
712.1
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
709.9
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
673.4
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
673.2
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
663.8
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
646.1
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
643.7
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
637.0
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
627.8
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
623.3
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
620.7
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
616.4
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
613.6
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
612.8
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
610.9
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
609.8
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
607.9
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
604.8
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
603.1
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
599.6
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
592.5
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
590.0
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
578.6
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
577.3
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
569.1
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
565.2
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
564.0
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
563.2
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
560.6
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
560.1
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
559.3
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
547.0
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
546.6
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
544.7
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
536.4
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
535.9
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
533.6
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
533.4
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
532.5
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
530.4
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
528.7
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
520.3
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
512.6
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
511.5
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
506.1
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
505.6
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
505.0
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
502.5
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
496.4
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
496.2
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
491.1
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
489.7
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
485.2
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
482.0
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
481.1
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
479.9
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
475.1
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
474.5
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
472.5
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
468.3
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
463.1
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
461.5
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
458.8
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
455.0
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
449.9
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
448.8
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
448.7
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
447.7
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
447.0
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
446.3
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
446.1
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
446.0
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
445.5
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
444.5
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
443.3
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
442.4
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
439.0
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
438.7
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
437.9
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
432.2
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
431.3
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
431.0
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
429.3
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
428.9
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
423.4
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
423.1
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
421.7
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
421.0
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
420.8
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
419.9
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
419.3
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
418.8
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
418.2
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
417.8
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
417.2
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
416.1
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
414.5
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
413.5
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
413.5
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
413.2
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
405.5
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
405.2
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
404.7
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
404.7
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
402.3
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
402.1
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
401.9
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
401.7
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
401.2
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
397.8
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
395.9
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
395.4
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
394.2
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
394.2
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
392.1
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
390.9
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
389.4
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
388.2
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
386.1
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
383.9
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
381.6
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
380.8
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
380.8
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
380.3
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
379.0
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
377.7
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
376.5
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
374.1
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
374.0
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
372.5
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
371.0
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
370.2
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
370.0
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
369.0
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
367.6
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
367.0
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
365.3
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
363.3
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
363.3
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
362.7
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
360.4
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
359.6
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
359.5
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
359.2
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
357.3
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
357.0
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
356.7
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
356.5
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
356.5
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
355.6
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
355.1
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
352.5
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
351.8
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
349.6
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
348.7
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
348.4
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
347.8
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
347.3
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
347.1
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
345.7
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
345.7
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
344.6
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
344.4
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
340.3
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
339.8
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
339.2
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
338.0
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
336.6
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
335.6
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
335.2
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
333.8
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
333.6
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
333.2
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
332.9
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
332.8
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
331.8
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
329.0
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
328.6
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
328.5
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
326.5
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
326.2
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
324.1
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
323.4
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
322.8
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
320.5
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
319.4
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
318.7
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
318.7
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
318.2
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
317.6
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
316.6
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
315.9
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
315.5
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
315.3
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
314.4
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
313.3
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
312.8
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
311.3
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
310.6
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
310.5
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
310.1
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
309.7
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
305.4
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
303.9
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
303.4
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
302.0
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
301.7
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
299.0
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
298.8
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
298.7
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
298.5
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
297.9
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
297.9
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
296.9
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
295.9
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
294.8
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
293.7
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
293.1
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
292.6
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
292.0
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
291.4
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
291.4
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
290.7
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
290.1
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
290.0
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
289.7
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
289.4
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
289.1
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
289.1
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
288.5
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
286.9
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
284.5
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
283.7
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
283.5
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
282.6
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
282.6
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
282.4
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
282.1
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
280.1
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
280.0
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
279.6
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
279.1
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
277.4
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
277.3
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
275.9
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
275.9
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
274.3
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
272.8
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
272.8
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
272.4
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
269.8
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
268.3
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
268.0
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
266.3
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
266.0
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
265.7
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
265.2
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
264.6
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
263.7
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
261.3
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
260.5
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
260.4
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
257.8
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
257.2
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
256.0
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
253.8
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
252.9
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
252.9
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
252.3
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
250.0
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
249.1
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
247.2
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
247.0
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
245.5
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
245.1
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
244.8
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
244.0
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
242.8
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
242.5
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
241.8
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
241.4
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
237.3
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
236.8
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
236.1
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
235.3
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
235.0
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
234.2
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
233.7
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
233.3
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
232.9
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
232.0
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
230.8
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
230.5
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
229.3
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
229.0
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
228.6
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
227.9
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
226.0
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
224.9
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
224.1
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
224.1
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
223.2
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
219.9
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
219.2
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
218.6
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
218.0
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
217.7
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
217.3
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
216.1
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
215.8
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
214.9
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
214.8
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
213.7
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
210.4
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
208.8
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
205.5
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
204.6
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
199.4
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
195.0
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
192.6
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
191.1
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
181.1
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
180.8
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
180.2
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
176.5
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
171.4
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
162.3
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
145.9
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
145.3
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
145.2
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
133.3
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
110.5
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COX4I1 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
550.0
Number of samples
81
Samples
Sample
Description
TPM
DO46333
0 years, female, NA, stage:III, dead, 359 days
3867.9
DO46611
0 years, female, NA, stage:III, dead, 734 days
1631.9
DO46453
0 years, female, NA, stage:III, dead, 3294 days
1403.2
DO46342
0 years, female, NA, stage:III, dead, 1398 days
1196.3
DO46576
0 years, female, NA, stage:III, alive, 133 days
986.8
DO46366
0 years, female, NA, stage:III, dead, 2054 days
937.8
DO46581
0 years, female, NA, stage:III, dead, 408 days
932.5
DO46370
0 years, female, NA, stage:III, dead, 1727 days
881.9
DO46546
0 years, female, NA, stage:III, dead, 1889 days
825.8
DO46356
0 years, female, NA, stage:III, dead, 911 days
820.4
DO46384
0 years, female, NA, stage:III, dead, 614 days
820.0
DO46354
0 years, female, NA, stage:III, dead, 843 days
763.5
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
713.2
DO46374
0 years, female, NA, stage:III, dead, 1409 days
703.7
DO46533
0 years, female, NA, stage:III, alive, 3667 days
697.3
DO46376
0 years, female, NA, stage:III, dead, 1430 days
687.5
DO46586
0 years, female, NA, stage:III, dead, 1019 days
687.2
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
686.4
DO46331
0 years, female, NA, stage:III, dead, 612 days
674.5
DO46328
0 years, female, NA, stage:III, dead, 972 days
645.4
DO46602
0 years, female, NA, stage:III, dead, 205 days
641.7
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
607.5
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
606.3
DO46591
0 years, female, NA, stage:III, dead, 195 days
604.0
DO46448
0 years, female, NA, stage:III, dead, 654 days
589.2
DO46338
0 years, female, NA, stage:III, dead, 596 days
570.8
DO46350
0 years, female, NA, stage:III, dead, 886 days
566.7
DO46368
0 years, female, NA, stage:III, dead, 2879 days
566.5
DO46538
0 years, female, NA, stage:III, dead, 1527 days
559.1
DO46364
0 years, female, NA, stage:III, dead, 806 days
548.1
DO46463
0 years, female, NA, stage:III, dead, 2451 days
525.7
DO46390
0 years, female, NA, stage:III, dead, 374 days
524.9
DO46412
0 years, female, NA, stage:III, dead, 597 days
479.8
DO46329
0 years, female, NA, stage:III, dead, 1699 days
469.7
DO46372
0 years, female, NA, stage:III, dead, 1326 days
467.0
DO46400
0 years, female, NA, stage:III, dead, 719 days
466.1
DO46508
0 years, female, NA, stage:III, dead, 2101 days
465.1
DO46392
0 years, female, NA, stage:III, dead, 628 days
458.9
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
452.2
DO46388
0 years, female, NA, stage:III, dead, 413 days
446.8
DO46380
0 years, female, NA, stage:III, dead, 1423 days
443.9
DO46402
0 years, female, NA, stage:III, dead, 511 days
441.6
DO46352
0 years, female, NA, stage:III, dead, 677 days
424.3
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
418.6
DO46348
0 years, female, NA, stage:IV, dead, 287 days
417.1
DO46468
0 years, female, NA, stage:III, alive, 2776 days
413.7
DO46551
0 years, female, NA, stage:III, dead, 1055 days
411.4
DO46326
0 years, female, NA, stage:III, dead, 701 days
386.8
DO46588
0 years, female, NA, stage:III, dead, 438 days
382.7
DO46597
0 years, female, NA, stage:III, dead, 393 days
380.1
DO46432
0 years, female, NA, stage:III, alive, 2218 days
379.2
DO46396
0 years, female, NA, stage:III, dead, 583 days
370.0
DO46566
0 years, female, NA, stage:III, dead, 673 days
368.3
DO46334
0 years, female, NA, stage:III, dead, 496 days
366.2
DO46568
0 years, female, NA, stage:III, dead, 320 days
362.1
DO46408
0 years, female, NA, stage:III, dead, 489 days
360.0
DO46518
0 years, female, NA, stage:III, alive, 2960 days
358.0
DO46398
0 years, female, NA, stage:III, alive, 437 days
357.8
DO46443
0 years, female, NA, stage:III, dead, 2464 days
345.5
DO46528
0 years, female, NA, stage:III, alive, 6139 days
340.9
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
340.6
DO46382
0 years, female, NA, stage:IV, dead, 311 days
339.8
DO46327
0 years, female, NA, stage:III, dead, 184 days
322.7
DO46571
0 years, female, NA, stage:III, dead, 243 days
305.1
DO46386
0 years, female, NA, stage:III, dead, 1162 days
300.7
DO46560
0 years, female, NA, stage:IV, dead, 286 days
300.4
DO46346
0 years, female, NA, stage:III, dead, 1187 days
294.1
DO46336
0 years, female, NA, stage:IV, dead, 664 days
291.9
DO46378
0 years, female, NA, stage:III, alive, 843 days
282.1
DO46332
0 years, female, NA, stage:III, dead, 689 days
270.6
DO46493
0 years, female, NA, stage:IV, alive, 839 days
267.8
DO46561
0 years, female, NA, stage:III, dead, 195 days
262.7
DO46344
0 years, female, NA, stage:III, dead, 642 days
260.2
DO46325
0 years, female, NA, stage:III, dead, 477 days
251.6
DO46330
0 years, female, NA, stage:III, dead, 684 days
250.5
DO46362
0 years, female, NA, stage:III, dead, 1639 days
244.9
DO46404
0 years, female, NA, stage:III, dead, 690 days
244.2
DO46606
0 years, female, NA, stage:III, alive, 804 days
241.8
DO46340
0 years, female, NA, stage:III, dead, 616 days
239.5
DO46358
0 years, female, NA, stage:III, dead, 423 days
183.2
DO46436
0 years, female, NA, stage:III, alive, 3193 days
154.9
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
1.1
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
0.9
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
0.8
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
0.7
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
0.4
1db5574d-aca7-403c-8100-6e705f_D2
Normal
0.4
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
0.2
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
0.2
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
0.1
1772e913-f62e-446a-8cf3-720348_D2
Tumor
0.1
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
0.1
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
0.0
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
0.0
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
0.0
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
0.0
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
0.0
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
0.0
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
0.0
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
0.0
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
0.0
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
0.0
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
0.0
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
-0.1
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
-0.1
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
-0.1
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
-0.1
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
-0.1
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
-0.1
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
-0.1
161317f3-1a39-438e-af45-cd2502_D2
Tumor
-0.1
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
-0.1
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
-0.1
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
-0.1
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
-0.1
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
-0.1
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
-0.1
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
-0.2
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
-0.2
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
-0.2
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
-0.2
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
-0.2
1a10c200-3895-4648-b951-94f99f_D2
Tumor
-0.2
2f901c90-617e-46da-9fac-d68369_D2
Tumor
-0.2
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
-0.2
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
-0.2
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
-0.2
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
-0.2
15524912-685a-47ce-a824-567848_D2
Tumor
-0.2
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
-0.2
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
-0.2
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
-0.2
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
-0.2
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
-0.2
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
-0.2
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
-0.3
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
-0.3
285fed94-1495-448e-879b-b55de9_D2
Tumor
-0.3
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
-0.3
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
-0.3
a65d8e76-640f-4341-a561-afbb57_D2
Normal
-0.3
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
-0.3
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
-0.3
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
-0.3
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
-0.3
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
-0.3
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
-0.3
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
-0.3
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
-0.4
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
-0.4
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
-0.4
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
-0.4
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
-0.4
21efd60f-6a31-4b98-9477-16a905_D2
Normal
-0.4
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
-0.4
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
-0.4
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
-0.4
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
-0.5
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
-0.5
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
-0.5
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
-0.5
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
-0.5
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
-0.5
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
-0.6
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
-0.6
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
-0.6
10c2d629-0287-4511-ac25-f29031_D2
Tumor
-0.6
340a3769-3031-41ae-bb08-a2f696_D2
Normal
-0.6
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
-0.6
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
-0.6
a3a26070-fb84-406a-8280-d555e6_D2
Normal
-0.6
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
-0.6
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
-0.6
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
-0.7
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
-0.7
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
-0.7
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
-0.7
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
-0.7
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
-0.7
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
-0.7
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
-0.7
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
-0.7
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
-0.8
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
-0.8
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
-0.8
e9d416e7-f661-400a-896e-388545_D2
Tumor
-0.8
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
-0.9
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
-1.0
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
-1.1
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.