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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RBM39 is potential prognostic, high expression is unfavorable in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
93.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
63.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
62.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
56.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
52.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
45.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
44.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
43.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
42.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
41.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
41.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
38.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
37.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
37.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
34.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
33.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
33.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
31.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
30.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
29.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
29.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
29.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
28.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
26.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
26.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
26.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
25.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
24.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
23.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
21.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
21.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
21.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
20.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
20.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
19.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
19.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
17.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
17.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
16.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
16.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
15.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
14.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
13.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
12.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
12.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
11.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
11.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
11.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
10.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
10.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
10.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
9.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
8.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
8.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
8.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
8.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
6.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
6.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
5.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
4.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
4.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
3.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
3.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RBM39 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
89.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
73.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
50.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
49.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
49.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
48.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
47.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
47.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
47.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
46.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
46.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
46.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
45.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
45.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
45.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
44.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
44.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
44.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
43.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
43.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
42.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
42.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
42.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
41.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
41.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
41.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
40.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
38.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
38.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
37.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
37.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
37.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
37.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
37.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
37.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
36.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
36.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
35.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
35.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
35.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
35.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
34.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
34.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
34.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
33.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
33.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
33.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
33.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
33.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
33.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
32.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
32.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
32.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
32.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
32.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
32.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
32.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
32.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
32.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
32.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
32.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
32.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
32.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
32.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
32.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
32.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
32.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
31.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
31.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
31.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
31.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
31.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
31.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
30.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
30.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
30.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
30.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
29.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
29.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
29.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
29.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
29.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
29.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
29.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
29.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
29.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
28.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
28.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
28.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
28.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
28.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
28.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
28.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
28.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
28.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
28.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
28.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
28.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
28.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
28.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
28.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
28.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
28.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
27.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
27.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
27.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
27.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
27.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
27.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
27.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
27.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
27.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
26.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
26.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
26.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
26.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
26.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
26.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
26.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
26.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
26.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
26.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
25.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
25.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
25.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
25.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
25.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
25.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
25.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
25.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
25.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
25.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
25.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
25.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
24.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
24.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
24.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
24.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
24.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
24.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
24.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
24.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
24.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
24.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
24.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
24.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
23.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
23.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
23.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
23.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
23.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
23.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
23.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
23.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
23.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
23.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
23.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
23.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
23.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
22.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
22.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
22.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
22.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
22.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
22.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
22.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
22.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
22.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
22.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
22.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
22.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
22.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
22.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
22.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
22.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
22.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
22.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
22.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
22.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
22.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
21.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
21.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
21.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
21.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
21.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
21.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
21.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
21.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
21.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
21.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
21.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
21.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
21.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
21.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
21.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
21.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
20.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
20.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
20.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
20.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
20.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
20.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
20.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
20.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
20.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
20.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
20.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
20.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
20.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
20.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
20.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
19.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
19.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
19.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
19.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
19.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
19.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
19.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
19.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
19.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
19.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
19.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
19.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
19.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
19.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
19.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
19.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
19.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
19.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
19.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
19.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
19.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
19.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
18.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
18.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
18.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
18.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
18.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
18.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
18.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
18.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
18.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
18.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
18.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
18.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
18.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
18.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
18.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
18.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
18.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
18.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
18.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
18.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
17.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
17.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
17.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
17.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
17.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
17.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
17.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
17.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
17.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
17.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
17.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
17.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
16.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
16.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
16.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
16.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
16.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
16.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
16.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
16.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
16.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
16.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
16.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
16.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
16.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
16.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
16.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
16.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
16.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
16.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
16.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
16.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
16.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
16.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
15.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
15.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
15.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
15.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
15.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
15.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
15.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
15.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
15.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
15.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
15.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
15.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
15.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
15.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
15.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
15.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
15.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
15.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
15.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
15.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
15.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
15.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
14.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
14.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
14.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
14.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
14.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
14.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
14.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
14.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
14.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
14.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
14.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
14.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
13.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
13.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
13.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
13.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
13.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
13.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
13.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
13.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
13.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
13.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
13.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
13.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
13.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
13.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
13.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
13.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
13.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
13.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
13.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
13.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
13.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
12.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
12.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
12.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
12.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
12.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
12.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
12.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
12.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
12.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
12.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
12.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
12.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
11.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
11.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
11.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
11.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
11.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
11.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
11.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
11.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
11.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
11.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
11.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
11.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
11.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
11.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
11.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
11.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
11.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
11.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
11.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
11.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
11.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
10.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
10.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
10.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
10.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
10.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
10.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
10.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
10.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
10.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
10.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
10.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
10.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
10.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
10.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
10.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
10.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
10.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
9.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
9.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
9.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
9.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
9.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
9.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
9.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
9.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
9.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
9.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
9.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
9.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
9.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
9.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
9.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
9.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
9.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
9.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
8.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
8.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
8.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
8.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
8.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
8.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
8.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
8.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
8.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
8.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
8.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
8.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
8.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
8.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
8.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
8.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
8.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
7.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
7.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
7.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
7.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
7.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
7.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
7.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
7.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
7.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
7.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
7.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
7.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
7.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
6.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
6.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
6.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
6.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
6.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
6.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
6.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
6.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
6.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
6.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
6.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
6.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
6.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
6.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
6.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
6.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
6.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
5.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
5.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
5.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
5.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
5.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
5.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
5.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
4.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
4.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
4.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
4.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
4.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
4.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
4.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
3.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
3.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
3.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
3.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
3.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
3.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
3.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
3.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
3.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
3.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
3.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
3.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
3.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
3.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
2.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
2.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
2.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
2.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
2.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
2.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
2.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
2.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
2.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
2.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
2.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
2.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
2.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
1.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
1.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
1.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
1.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
1.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
1.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
1.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
1.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
1.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
1.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
1.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
1.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
1.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
1.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
1.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
0.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
0.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
0.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
0.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RBM39 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
39.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
97.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
85.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
81.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
72.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
71.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
69.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
69.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
68.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
66.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
66.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
64.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
63.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
62.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
61.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
60.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
58.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
53.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
53.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
52.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
51.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
50.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
50.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
49.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
48.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
48.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
48.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
47.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
47.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
47.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
47.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
46.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
45.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
44.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
44.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
44.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
43.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
41.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
41.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
41.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
41.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
40.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
39.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
39.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
39.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
38.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
38.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
38.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
38.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
38.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
38.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
37.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
37.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
36.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
36.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
35.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
35.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
35.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
34.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
34.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
34.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
34.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
33.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
33.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
32.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
32.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
32.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
31.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
31.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
31.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
31.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
30.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
29.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
29.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
28.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
28.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
28.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
28.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
28.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
25.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
24.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
23.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
23.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
23.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
23.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
23.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
22.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
21.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
21.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
19.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
19.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
18.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
17.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
16.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
15.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
14.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
11.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
8.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
7.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RBM39 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
163.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
106.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
100.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
94.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
83.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
80.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
74.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
67.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
59.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
58.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
55.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
53.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
53.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
49.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
49.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
48.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
48.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
48.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
44.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
43.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
42.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
41.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
40.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
40.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
40.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
40.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
40.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
39.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
39.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
37.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
37.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
37.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
36.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
35.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
35.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
35.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
35.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
35.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
34.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
34.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
33.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
33.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
33.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
33.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
32.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
31.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
31.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
31.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
30.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
30.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
30.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
30.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
29.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
29.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
28.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
28.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
28.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
27.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
27.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
27.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
27.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
27.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
26.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
26.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
26.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
26.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
26.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
26.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
25.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
25.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
25.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
25.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
24.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
24.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
24.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
24.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
24.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
24.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
23.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
23.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
23.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
23.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
22.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
22.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
22.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
21.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
21.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
21.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
21.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
21.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
20.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
20.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
19.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
19.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
19.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
19.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
19.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
19.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
19.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
19.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
19.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
18.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
18.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
18.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
17.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
17.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
17.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
17.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
17.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
17.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
17.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
16.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
16.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
16.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
16.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
16.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
16.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
16.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
16.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
16.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
16.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
16.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
15.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
15.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
15.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
15.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
15.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
15.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
15.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
15.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
14.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
14.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
14.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
14.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
14.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
14.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
14.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
14.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
14.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
13.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
13.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
13.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
13.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
13.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
13.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
12.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
12.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
12.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
12.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
12.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
12.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
12.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
12.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
12.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
12.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
12.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
11.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
11.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
11.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
11.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
11.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
11.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
11.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
11.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
11.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
10.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
10.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
10.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
10.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
10.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
10.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
10.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
10.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
10.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
9.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
9.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
9.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
9.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
9.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
9.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
9.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
9.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
9.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
9.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
8.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
8.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
8.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
8.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
8.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
8.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
8.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
8.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
8.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
7.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
7.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
7.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
7.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
7.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
6.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
6.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
6.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
6.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
6.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
6.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
6.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
6.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
6.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
6.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
5.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
5.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
5.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
5.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
4.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
4.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
4.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
4.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
4.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
4.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
4.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
3.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
3.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
3.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
3.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
3.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
3.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
3.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
3.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
3.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
3.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
3.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
3.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
3.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
3.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
2.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
2.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
2.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
2.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
2.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
2.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
2.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
2.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
2.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
2.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
2.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
2.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
2.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
2.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
2.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
1.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
1.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
1.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
1.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
1.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
1.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
1.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
1.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
1.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
1.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
1.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
1.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
1.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
1.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
1.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
0.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
0.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
0.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0017410003
Tumor
0.5
CPT0084590001
Normal
0.4
CPT0012640003
Normal
0.4
CPT0079180003
Tumor
0.3
CPT0086870003
Tumor
0.3
CPT0077320001
Normal
0.3
CPT0069160003
Tumor
0.3
CPT0079300001
Normal
0.3
CPT0084560003
Tumor
0.3
CPT0012080003
Tumor
0.3
CPT0092190003
Normal
0.3
CPT0075170001
Normal
0.3
CPT0024670003
Tumor
0.3
CPT0078510003
Tumor
0.3
CPT0001270001
Normal
0.3
CPT0012180003
Tumor
0.3
CPT0075720003
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0006440003
Tumor
0.3
CPT0017850003
Tumor
0.3
CPT0001260009
Tumor
0.3
CPT0001340003
Tumor
0.3
CPT0077110003
Tumor
0.2
CPT0017450001
Normal
0.2
CPT0009060003
Tumor
0.2
CPT0079510001
Normal
0.2
CPT0025580004
Tumor
0.2
CPT0088550004
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0001540009
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0088970003
Tumor
0.2
CPT0085670003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0081990003
Tumor
0.2
CPT0014370004
Tumor
0.2
CPT0026410003
Tumor
0.2
CPT0069190001
Normal
0.2
CPT0012370003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0065820001
Normal
0.2
CPT0024680001
Normal
0.2
CPT0025350003
Tumor
0.2
CPT0075130003
Tumor
0.2
CPT0009080003
Normal
0.2
CPT0001230001
Normal
0.1
CPT0025610001
Normal
0.1
CPT0092730003
Tumor
0.1
CPT0010110003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0001180009
Tumor
0.1
CPT0012090003
Normal
0.1
CPT0002370001
Normal
0.1
CPT0086820003
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0079000001
Normal
0.1
CPT0012900004
Tumor
0.1
CPT0082010001
Normal
0.1
CPT0011240003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0000780007
Tumor
0.1
CPT0079430001
Normal
0.1
CPT0010120001
Normal
0.1
CPT0086370003
Normal
0.1
CPT0063330001
Normal
0.1
CPT0079380003
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0001220008
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0023690003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0089020003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0087050003
Normal
0.1
CPT0012770003
Normal
0.1
CPT0092740003
Normal
0.1
CPT0092800003
Normal
0.1
CPT0012670003
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0088760003
Tumor
0.1
CPT0007870001
Normal
0.1
CPT0014350001
Normal
0.1
CPT0066480003
Tumor
0.1
CPT0086830003
Normal
0.1
CPT0077490003
Tumor
0.1
CPT0001350001
Normal
0.1
CPT0064400001
Normal
0.1
CPT0000660001
Normal
0.1
CPT0086360003
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0069010001
Normal
0.1
CPT0086890003
Normal
0.1
CPT0023360001
Normal
0.1
CPT0012290003
Normal
0.1
CPT0087040003
Tumor
0.1
CPT0089040001
Normal
0.1
CPT0025920001
Normal
0.1
CPT0088640003
Normal
0.1
CPT0092290003
Tumor
0.1
CPT0088900003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0014130001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0088500001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0075570001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0014470001
Normal
0.0
CPT0077310003
Tumor
0.0
CPT0088780001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0088920001
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0078940001
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0006730001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0078800003
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0019990003
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0065810003
Tumor
0.0
CPT0009000003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0065430003
Tumor
0.0
CPT0025050003
Tumor
0.0
CPT0025880003
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0025290003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0063630003
Tumor
0.0
CPT0012570003
Normal
0.0
CPT0025060001
Normal
0.0
CPT0021240003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0065930003
Tumor
0.0
CPT0020020001
Normal
0.0
CPT0015730003
Tumor
0.0
CPT0006630003
Tumor
0.0
CPT0012550003
Tumor
0.0
CPT0089460004
Tumor
0.0
CPT0011410003
Tumor
0.0
CPT0015910003
Tumor
0.0
CPT0065450001
Normal
0.0
CPT0010160003
Tumor
0.0
CPT0010170001
Normal
0.0
CPT0066430001
Normal
0.0
CPT0014160003
Tumor
0.0
CPT0000790001
Normal
0.0
CPT0078660003
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0023350003
Tumor
0.0
CPT0006950001
Normal
0.0
CPT0015810003
Tumor
0.0
CPT0025110003
Tumor
0.0
CPT0089480003
Normal
0.0
CPT0063320003
Tumor
-0.1
CPT0013790003
Normal
-0.1
CPT0088480003
Tumor
-0.1
CPT0002270011
Tumor
-0.1
CPT0079270003
Tumor
-0.1
CPT0088710001
Normal
-0.1
CPT0079230003
Tumor
-0.1
CPT0076350001
Normal
-0.1
CPT0086030003
Tumor
-0.1
CPT0086950003
Tumor
-0.1
CPT0077140001
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0019130003
Tumor
-0.1
CPT0012280003
Tumor
-0.1
CPT0065750003
Tumor
-0.1
CPT0007860003
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0006900003
Tumor
-0.1
CPT0069000003
Tumor
-0.1
CPT0077500001
Normal
-0.1
CPT0086970003
Normal
-0.2
CPT0081880003
Tumor
-0.2
CPT0000640003
Tumor
-0.3
CPT0020120003
Tumor
-0.3
CPT0076330003
Tumor
-0.3
CPT0064370003
Tumor
-0.3
CPT0001500009
Tumor
-0.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
