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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HABP4 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
46.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
37.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
26.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
26.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
23.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
21.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
21.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
19.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
18.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
17.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
17.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
17.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
16.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
15.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
15.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
14.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
13.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
12.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
12.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
12.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
12.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
12.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
11.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
11.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
11.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
11.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
10.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
10.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
10.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
10.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
10.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
9.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
9.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
9.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
9.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
9.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
8.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
8.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
8.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
8.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
8.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
8.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
8.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
7.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
6.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
6.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
6.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
6.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
6.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
6.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
5.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
5.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
5.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
5.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
4.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
4.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
4.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
4.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
4.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
3.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
3.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
3.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HABP4 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
191.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
55.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
49.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
45.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
44.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
43.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
42.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
37.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
36.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
36.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
35.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
35.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
33.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
33.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
32.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
31.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
30.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
30.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
30.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
29.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
29.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
29.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
28.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
28.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
28.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
28.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
28.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
28.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
28.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
28.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
27.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
27.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
27.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
26.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
26.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
26.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
26.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
26.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
25.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
25.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
25.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
25.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
25.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
25.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
25.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
25.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
24.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
24.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
24.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
24.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
24.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
24.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
23.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
23.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
23.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
23.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
23.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
23.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
23.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
23.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
23.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
23.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
23.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
23.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
23.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
23.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
22.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
22.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
22.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
22.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
22.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
22.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
22.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
22.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
22.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
22.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
21.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
21.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
21.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
21.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
21.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
21.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
21.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
21.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
20.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
20.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
20.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
20.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
20.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
20.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
20.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
20.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
20.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
20.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
20.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
20.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
20.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
20.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
20.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
20.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
20.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
19.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
19.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
19.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
19.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
19.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
19.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
19.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
19.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
19.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
19.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
19.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
18.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
18.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
18.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
18.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
18.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
18.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
18.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
18.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
18.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
18.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
18.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
18.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
18.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
18.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
18.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
18.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
18.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
18.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
17.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
17.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
17.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
17.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
17.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
17.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
17.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
17.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
17.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
17.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
17.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
17.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
17.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
17.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
17.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
17.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
17.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
17.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
16.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
16.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
16.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
16.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
16.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
16.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
16.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
16.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
16.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
16.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
16.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
16.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
16.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
16.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
16.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
16.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
16.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
16.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
16.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
16.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
16.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
16.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
16.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
16.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
16.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
16.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
16.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
16.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
16.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
15.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
15.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
15.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
15.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
15.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
15.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
15.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
15.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
15.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
15.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
15.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
15.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
15.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
15.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
15.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
15.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
15.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
15.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
15.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
15.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
15.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
15.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
15.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
15.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
15.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
15.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
14.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
14.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
14.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
14.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
14.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
14.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
14.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
14.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
14.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
14.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
14.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
14.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
14.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
14.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
14.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
14.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
14.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
14.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
14.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
14.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
14.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
14.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
14.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
14.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
14.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
14.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
14.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
13.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
13.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
13.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
13.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
13.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
13.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
13.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
13.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
13.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
13.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
13.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
13.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
13.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
13.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
13.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
13.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
13.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
13.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
13.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
13.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
13.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
13.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
13.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
13.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
13.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
12.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
12.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
12.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
12.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
12.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
12.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
12.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
12.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
12.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
12.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
12.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
12.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
12.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
12.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
12.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
12.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
12.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
12.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
12.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
12.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
12.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
12.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
12.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
12.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
12.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
12.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
11.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
11.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
11.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
11.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
11.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
11.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
11.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
11.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
11.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
11.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
11.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
11.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
11.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
11.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
11.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
11.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
11.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
11.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
11.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
11.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
11.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
11.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
10.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
10.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
10.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
10.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
10.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
10.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
10.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
10.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
10.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
10.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
10.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
10.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
10.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
10.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
10.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
10.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
10.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
10.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
10.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
10.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
10.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
10.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
10.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
10.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
10.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
10.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
10.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
10.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
10.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
10.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
10.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
10.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
10.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
9.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
9.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
9.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
9.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
9.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
9.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
9.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
9.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
9.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
9.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
9.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
9.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
9.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
9.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
9.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
9.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
9.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
9.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
9.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
9.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
9.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
9.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
9.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
9.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
9.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
9.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
9.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
9.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
9.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
9.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
9.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
9.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
9.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
9.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
9.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
9.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
9.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
8.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
8.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
8.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
8.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
8.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
8.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
8.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
8.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
8.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
8.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
8.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
8.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
8.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
8.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
8.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
8.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
8.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
8.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
8.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
8.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
8.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
8.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
8.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
8.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
8.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
8.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
8.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
8.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
8.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
8.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
8.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
8.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
8.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
7.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
7.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
7.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
7.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
7.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
7.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
7.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
7.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
7.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
7.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
7.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
7.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
7.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
7.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
7.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
7.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
7.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
7.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
7.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
7.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
7.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
7.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
7.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
7.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
7.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
7.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
7.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
6.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
6.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
6.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
6.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
6.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
6.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
6.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
6.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
6.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
6.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
6.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
6.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
6.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
6.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
6.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
6.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
6.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
6.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
6.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
6.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
6.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
6.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
6.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
6.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
6.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
6.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
6.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
6.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
6.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
6.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
6.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
5.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
5.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
5.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
5.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
5.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
5.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
5.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
5.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
5.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
5.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
5.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
5.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
5.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
5.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
5.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
5.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
5.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
5.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
5.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
5.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
4.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
4.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
4.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
4.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
4.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
4.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
4.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
4.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
4.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
4.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
4.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
4.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
4.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
4.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
4.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
4.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
3.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
3.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
3.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
3.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
3.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
3.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
3.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
3.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
3.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
2.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
2.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
2.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
2.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
2.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
2.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
2.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
2.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
2.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HABP4 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
68.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
52.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
45.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
42.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
41.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
37.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
36.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
35.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
29.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
29.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
28.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
28.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
26.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
24.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
24.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
24.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
24.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
24.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
24.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
23.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
23.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
23.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
22.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
20.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
20.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
20.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
19.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
19.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
19.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
19.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
19.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
18.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
18.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
18.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
18.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
17.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
17.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
17.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
16.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
16.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
16.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
16.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
16.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
15.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
15.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
14.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
14.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
14.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
14.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
14.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
14.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
14.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
14.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
13.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
13.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
13.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
13.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
12.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
12.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
12.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
12.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
12.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
12.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
12.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
11.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
11.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
10.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
10.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
10.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
10.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
10.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
10.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
10.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
10.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
10.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
9.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
9.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
9.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
9.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
8.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
8.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
8.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
7.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
7.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
6.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
6.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
6.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
6.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
6.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
5.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
5.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
5.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
5.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
5.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
5.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
3.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
2.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
2.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HABP4 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
118.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
98.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
89.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
70.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
69.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
62.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
60.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
55.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
55.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
49.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
49.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
48.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
47.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
45.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
44.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
44.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
43.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
42.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
42.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
41.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
41.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
41.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
41.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
41.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
40.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
39.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
37.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
36.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
36.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
36.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
35.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
35.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
35.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
35.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
35.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
34.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
34.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
34.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
34.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
34.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
34.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
33.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
33.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
33.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
33.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
32.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
32.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
32.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
32.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
32.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
31.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
31.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
30.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
30.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
30.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
30.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
29.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
29.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
29.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
29.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
28.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
28.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
28.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
28.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
28.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
28.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
27.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
27.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
27.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
27.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
27.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
27.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
27.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
27.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
26.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
26.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
26.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
26.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
26.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
26.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
25.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
25.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
25.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
25.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
25.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
25.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
25.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
25.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
25.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
25.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
25.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
24.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
24.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
24.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
24.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
24.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
24.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
24.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
24.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
23.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
23.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
23.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
23.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
23.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
23.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
23.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
23.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
23.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
23.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
22.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
22.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
22.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
22.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
22.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
22.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
22.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
22.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
21.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
21.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
21.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
21.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
21.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
21.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
21.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
20.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
20.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
20.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
20.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
20.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
20.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
20.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
20.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
20.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
20.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
20.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
19.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
19.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
19.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
19.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
19.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
19.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
19.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
19.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
19.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
19.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
19.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
19.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
19.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
18.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
18.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
18.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
18.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
18.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
18.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
18.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
18.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
17.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
17.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
17.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
17.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
17.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
17.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
17.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
17.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
17.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
17.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
17.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
16.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
16.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
16.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
16.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
16.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
16.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
16.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
16.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
16.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
16.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
15.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
15.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
15.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
15.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
15.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
15.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
15.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
15.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
15.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
15.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
15.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
15.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
15.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
14.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
14.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
14.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
14.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
14.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
14.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
14.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
14.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
14.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
14.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
14.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
14.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
14.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
14.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
14.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
14.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
13.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
13.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
13.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
13.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
13.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
13.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
13.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
13.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
13.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
13.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
13.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
13.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
13.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
13.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
13.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
13.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
12.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
12.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
12.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
12.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
12.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
12.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
12.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
12.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
12.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
11.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
11.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
11.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
11.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
11.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
11.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
11.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
11.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
11.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
11.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
11.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
11.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
11.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
10.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
10.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
10.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
10.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
10.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
10.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
10.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
10.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
10.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
10.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
10.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
9.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
9.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
9.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
9.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
9.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
9.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
9.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
9.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
9.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
8.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
8.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
8.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
8.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
8.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
7.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
7.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
7.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
6.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
6.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
6.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
4.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
4.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
3.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
3.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.8
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0002270011
Tumor
2.4
CPT0006730001
Normal
0.6
CPT0088970003
Tumor
0.5
CPT0092800003
Normal
0.5
CPT0078800003
Tumor
0.5
CPT0025060001
Normal
0.5
CPT0078840001
Normal
0.5
CPT0077140001
Normal
0.5
CPT0018250001
Normal
0.5
CPT0020130001
Normal
0.5
CPT0007470001
Normal
0.5
CPT0066430001
Normal
0.5
CPT0001350001
Normal
0.5
CPT0026420001
Normal
0.4
CPT0001270001
Normal
0.4
CPT0076350001
Normal
0.4
CPT0012570003
Normal
0.4
CPT0009080003
Normal
0.4
CPT0007870001
Normal
0.4
CPT0065450001
Normal
0.4
CPT0013790003
Normal
0.4
CPT0001190001
Normal
0.4
CPT0012090003
Normal
0.4
CPT0065820001
Normal
0.4
CPT0023360001
Normal
0.4
CPT0079430001
Normal
0.4
CPT0092740003
Normal
0.4
CPT0000790001
Normal
0.4
CPT0086890003
Normal
0.4
CPT0010120001
Normal
0.4
CPT0000890001
Normal
0.4
CPT0012770003
Normal
0.4
CPT0010170001
Normal
0.4
CPT0081620001
Normal
0.4
CPT0025610001
Normal
0.4
CPT0088920001
Normal
0.4
CPT0014130001
Normal
0.3
CPT0000660001
Normal
0.3
CPT0017450001
Normal
0.3
CPT0078940001
Normal
0.3
CPT0088780001
Normal
0.3
CPT0012290003
Normal
0.3
CPT0089040001
Normal
0.3
CPT0014470001
Normal
0.3
CPT0086370003
Normal
0.3
CPT0082010001
Normal
0.3
CPT0006950001
Normal
0.3
CPT0020020001
Normal
0.3
CPT0078530001
Normal
0.3
CPT0086830003
Normal
0.3
CPT0088500001
Normal
0.3
CPT0078670001
Normal
0.3
CPT0084590001
Normal
0.3
CPT0077500001
Normal
0.3
CPT0069010001
Normal
0.3
CPT0012920003
Normal
0.3
CPT0075170001
Normal
0.3
CPT0086970003
Normal
0.2
CPT0015730003
Tumor
0.2
CPT0063640001
Normal
0.2
CPT0075570001
Normal
0.2
CPT0014350001
Normal
0.2
CPT0064400001
Normal
0.2
CPT0025920001
Normal
0.2
CPT0024680001
Normal
0.2
CPT0006440003
Tumor
0.2
CPT0092310003
Normal
0.2
CPT0089480003
Normal
0.2
CPT0088710001
Normal
0.2
CPT0066520001
Normal
0.2
CPT0079000001
Normal
0.2
CPT0001550001
Normal
0.2
CPT0087050003
Normal
0.2
CPT0063330001
Normal
0.2
CPT0023710001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0002370001
Normal
0.1
CPT0012900004
Tumor
0.1
CPT0012640003
Normal
0.1
CPT0001510001
Normal
0.1
CPT0088570001
Normal
0.1
CPT0009020003
Normal
0.1
CPT0009060003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0001230001
Normal
0.1
CPT0079510001
Normal
0.1
CPT0019160001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0086870003
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0092190003
Normal
0.0
CPT0069190001
Normal
0.0
CPT0002350011
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0017410003
Tumor
-0.1
CPT0069000003
Tumor
-0.1
CPT0014370004
Tumor
-0.1
CPT0086360003
Tumor
-0.1
CPT0015910003
Tumor
-0.1
CPT0078660003
Tumor
-0.1
CPT0007320003
Tumor
-0.1
CPT0064370003
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0078930003
Tumor
-0.1
CPT0077310003
Tumor
-0.1
CPT0081990003
Tumor
-0.1
CPT0088760003
Tumor
-0.1
CPT0089460004
Tumor
-0.1
CPT0086950003
Tumor
-0.1
CPT0065810003
Tumor
-0.2
CPT0081600003
Tumor
-0.2
CPT0079300001
Normal
-0.2
CPT0078510003
Tumor
-0.2
CPT0025110003
Tumor
-0.2
CPT0011240003
Tumor
-0.2
CPT0025170003
Tumor
-0.2
CPT0089020003
Tumor
-0.2
CPT0010160003
Tumor
-0.2
CPT0075560003
Tumor
-0.2
CPT0079230003
Tumor
-0.2
CPT0065930003
Tumor
-0.3
CPT0084560003
Tumor
-0.3
CPT0077490003
Tumor
-0.3
CPT0006630003
Tumor
-0.3
CPT0000780007
Tumor
-0.3
CPT0000640003
Tumor
-0.3
CPT0014450004
Tumor
-0.3
CPT0079480003
Tumor
-0.3
CPT0066470004
Tumor
-0.3
CPT0063320003
Tumor
-0.3
CPT0001500009
Tumor
-0.3
CPT0023690003
Tumor
-0.3
CPT0019990003
Tumor
-0.3
CPT0087040003
Tumor
-0.3
CPT0086030003
Tumor
-0.4
CPT0092730003
Tumor
-0.4
CPT0009000003
Tumor
-0.4
CPT0088900003
Tumor
-0.4
CPT0079180003
Tumor
-0.4
CPT0088630003
Tumor
-0.4
CPT0092160003
Tumor
-0.4
CPT0025580004
Tumor
-0.4
CPT0085670003
Tumor
-0.4
CPT0019130003
Tumor
-0.4
CPT0079380003
Tumor
-0.4
CPT0015810003
Tumor
-0.4
CPT0012370003
Tumor
-0.4
CPT0017850003
Tumor
-0.4
CPT0071150004
Tumor
-0.4
CPT0065750003
Tumor
-0.4
CPT0000870016
Tumor
-0.4
CPT0092790003
Tumor
-0.4
CPT0006900003
Tumor
-0.5
CPT0088690003
Tumor
-0.5
CPT0025350003
Tumor
-0.5
CPT0078990003
Tumor
-0.5
CPT0020120003
Tumor
-0.5
CPT0001220008
Tumor
-0.5
CPT0025290003
Tumor
-0.5
CPT0075130003
Tumor
-0.6
CPT0076330003
Tumor
-0.6
CPT0012670003
Tumor
-0.6
CPT0088550004
Tumor
-0.6
CPT0007860003
Tumor
-0.6
CPT0001260009
Tumor
-0.6
CPT0011410003
Tumor
-0.6
CPT0001540009
Tumor
-0.6
CPT0010110003
Tumor
-0.6
CPT0024670003
Tumor
-0.7
CPT0021240003
Tumor
-0.7
CPT0025880003
Tumor
-0.7
CPT0012180003
Tumor
-0.7
CPT0025230003
Tumor
-0.7
CPT0063630003
Tumor
-0.7
CPT0026410003
Tumor
-0.7
CPT0086820003
Tumor
-0.7
CPT0079410003
Tumor
-0.7
CPT0088480003
Tumor
-0.7
CPT0065690003
Tumor
-0.7
CPT0012550003
Tumor
-0.8
CPT0077110003
Tumor
-0.8
CPT0014160003
Tumor
-0.8
CPT0012080003
Tumor
-0.8
CPT0069160003
Tumor
-0.8
CPT0092290003
Tumor
-0.8
CPT0001180009
Tumor
-0.9
CPT0065430003
Tumor
-0.9
CPT0012280003
Tumor
-1.0
CPT0025050003
Tumor
-1.0
CPT0001340003
Tumor
-1.0
CPT0023350003
Tumor
-1.1
CPT0081880003
Tumor
-1.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
