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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
408.7
nTPM
HPA Brain:
39.7
nTPM
GTEx:
408.7
nTPM
FANTOM5:
617.0
Scaled Tags Per Million
Pig:
144.2
nTPM
Mouse:
711.7
nTPM
Allen mouse:
14.3
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
39.7
Sample id
Sample description
nTPM
Amygdala nTPM: 33.4
2814
Male, age 76, right hemisphere
40.9
1987
Female, age 91, left hemisphere
33.8
2517
Female, age 94, left hemisphere
31.3
2514
Male, age 75, right hemisphere
30.8
2695
Female, age 67, right hemisphere
30.4
Basal amygdala nTPM: 37.9
2243
Female, age 91, right hemisphere
52.9
1955
Male, age 76, both hemispheres
39.9
2110
Male, age 80, left hemisphere
37.2
2685
Female, age 94, left hemisphere
35.5
2609
Male, age 75, right hemisphere
33.8
2827
Female, age 67, right hemisphere
28.1
Central amygdala nTPM: 36.2
1905
Male, age 76, both hemispheres
42.3
2701
Female, age 91, right hemisphere
41.2
2239
Male, age 80, left hemisphere
39.1
2826
Female, age 94, left hemisphere
29.5
2515
Male, age 75, right hemisphere
28.7
Corticomedial amygdala nTPM: 39.7
2242
Female, age 91, right hemisphere
44.3
2829
Male, age 80, left hemisphere
44.1
2429
Female, age 94, left hemisphere
40.0
2240
Male, age 76, both hemispheres
39.2
2535
Female, age 67, right hemisphere
37.5
2428
Male, age 75, right hemisphere
33.0
Lateral amygdala nTPM: 29.9
1883
Male, age 76, both hemispheres
43.2
2255
Female, age 91, right hemisphere
32.3
2534
Female, age 94, left hemisphere
29.6
2516
Male, age 75, right hemisphere
28.5
2830
Female, age 67, right hemisphere
23.2
2256
Male, age 80, left hemisphere
22.5
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
408.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 408.7
Samples: 152
Max nTPM: 1427.1
Min nTPM: 157.3
Std nTPM: 193.8
Median nTPM: 375.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
1427.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
1254.2
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
1122.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
990.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
932.9
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
790.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
757.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
690.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
684.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
654.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
621.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
621.3
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
618.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
616.7
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
615.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
613.4
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
602.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
599.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
585.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
578.1
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
577.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
567.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
558.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
556.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
553.7
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
550.4
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
550.3
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
544.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
539.8
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
539.0
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
531.3
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
529.3
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
515.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
509.6
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
509.0
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
503.6
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
502.6
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
495.8
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
484.8
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
484.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
480.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
471.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
469.7
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
464.0
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
462.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
460.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
459.2
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
457.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
456.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
453.5
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
446.8
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
446.6
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
441.8
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
434.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
429.4
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
427.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
426.3
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
421.0
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
417.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
417.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
411.2
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
410.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
407.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
401.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
400.4
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
398.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
396.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
394.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
394.2
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
391.9
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
388.9
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
386.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
382.6
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
377.9
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
376.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
376.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
374.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
370.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
369.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
365.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
359.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
354.8
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
349.1
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
347.7
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
345.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
345.6
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
343.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
342.0
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
342.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
340.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
338.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
334.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
327.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
322.2
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
320.7
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
320.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
318.2
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
315.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
314.1
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
312.2
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
309.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
308.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
308.4
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
303.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
302.2
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
298.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
293.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
293.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
291.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
288.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
288.1
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
286.9
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
276.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
274.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
269.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
268.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
268.0
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
265.2
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
264.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
264.3
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
262.1
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
261.1
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
259.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
259.1
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
254.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
249.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
248.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
244.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
244.0
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
236.5
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
236.3
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
235.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
225.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
223.4
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
221.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
221.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
218.9
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
214.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
214.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
212.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
207.8
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
207.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
202.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
201.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
198.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
195.0
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
185.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
184.1
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
176.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
175.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
169.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
157.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
711.7
Mouse sample
Sample description
nTPM
Amygdala nTPM: 711.7
Samples: 4
Max nTPM: 740.1
Min nTPM: 684.9
Sample A
Male
684.9
Sample B
Male
740.1
Sample C
Female
727.6
Sample D
Female
694.2
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.