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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRIM28 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
124.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
243.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
233.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
217.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
210.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
188.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
185.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
176.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
175.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
172.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
170.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
169.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
166.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
165.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
165.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
163.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
160.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
156.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
153.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
153.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
152.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
152.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
145.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
145.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
143.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
141.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
141.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
141.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
137.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
136.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
132.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
132.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
131.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
128.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
125.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
123.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
121.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
114.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
111.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
109.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
109.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
107.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
101.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
100.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
94.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
89.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
87.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
87.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
84.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
82.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
80.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
79.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
76.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
75.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
70.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
69.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
68.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
63.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
61.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
55.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
52.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
50.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
48.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
43.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRIM28 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
115.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
389.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
264.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
228.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
228.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
224.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
222.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
218.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
215.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
214.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
213.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
209.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
206.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
194.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
190.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
190.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
189.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
188.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
187.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
187.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
184.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
183.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
181.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
181.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
179.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
179.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
179.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
178.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
177.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
176.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
176.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
174.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
173.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
172.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
172.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
171.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
170.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
170.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
170.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
169.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
168.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
168.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
167.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
167.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
167.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
164.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
163.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
163.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
162.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
160.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
160.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
160.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
159.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
159.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
158.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
158.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
157.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
157.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
156.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
156.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
156.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
155.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
155.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
155.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
155.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
155.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
154.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
153.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
153.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
153.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
152.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
151.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
151.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
150.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
150.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
150.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
150.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
149.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
149.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
149.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
148.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
148.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
148.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
147.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
147.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
146.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
146.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
146.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
146.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
146.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
145.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
145.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
145.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
145.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
145.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
145.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
145.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
145.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
145.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
145.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
145.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
144.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
144.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
144.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
144.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
143.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
143.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
143.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
143.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
143.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
142.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
142.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
141.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
141.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
141.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
141.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
141.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
141.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
140.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
140.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
140.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
140.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
139.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
139.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
139.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
139.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
139.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
139.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
138.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
138.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
138.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
137.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
137.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
137.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
137.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
137.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
137.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
136.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
136.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
136.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
136.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
136.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
136.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
136.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
135.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
135.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
135.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
135.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
135.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
134.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
134.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
133.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
133.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
133.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
133.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
133.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
133.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
132.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
132.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
131.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
131.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
131.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
131.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
131.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
131.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
131.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
130.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
130.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
129.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
129.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
129.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
129.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
128.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
128.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
128.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
128.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
128.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
128.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
128.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
127.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
127.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
127.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
127.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
127.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
127.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
127.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
127.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
127.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
126.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
126.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
126.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
126.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
126.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
126.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
126.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
125.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
125.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
125.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
125.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
125.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
125.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
125.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
124.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
123.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
123.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
123.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
123.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
123.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
122.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
122.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
122.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
122.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
122.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
122.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
121.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
121.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
121.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
121.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
121.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
121.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
120.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
120.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
120.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
120.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
120.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
119.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
119.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
119.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
118.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
118.5
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
118.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
118.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
118.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
118.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
117.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
117.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
117.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
117.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
116.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
116.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
116.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
116.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
116.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
116.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
116.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
116.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
116.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
116.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
115.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
115.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
115.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
115.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
115.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
115.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
115.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
115.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
115.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
115.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
115.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
114.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
114.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
114.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
114.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
114.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
113.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
113.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
113.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
113.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
113.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
113.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
113.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
113.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
113.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
113.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
113.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
113.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
113.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
113.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
112.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
112.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
112.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
112.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
111.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
111.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
111.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
111.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
111.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
110.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
110.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
110.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
109.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
109.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
108.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
108.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
108.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
108.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
107.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
107.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
107.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
106.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
106.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
106.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
106.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
106.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
106.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
106.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
106.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
106.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
105.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
105.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
105.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
104.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
104.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
104.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
104.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
104.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
104.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
104.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
104.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
103.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
103.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
103.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
103.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
102.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
102.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
102.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
102.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
102.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
102.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
101.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
101.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
101.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
101.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
101.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
101.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
100.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
100.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
100.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
100.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
100.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
100.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
100.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
100.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
99.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
99.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
99.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
99.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
99.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
98.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
98.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
98.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
98.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
98.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
98.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
98.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
98.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
97.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
97.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
97.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
96.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
96.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
96.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
96.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
96.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
96.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
96.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
96.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
95.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
95.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
95.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
95.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
95.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
95.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
95.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
95.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
95.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
94.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
94.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
94.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
94.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
94.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
93.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
93.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
93.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
92.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
92.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
92.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
92.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
91.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
91.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
91.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
91.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
91.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
90.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
90.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
90.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
89.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
89.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
89.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
89.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
89.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
88.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
88.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
87.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
87.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
87.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
87.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
86.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
86.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
86.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
86.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
85.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
85.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
85.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
85.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
84.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
84.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
84.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
83.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
83.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
82.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
82.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
81.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
81.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
80.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
79.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
79.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
79.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
79.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
79.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
79.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
79.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
78.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
78.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
78.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
77.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
77.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
76.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
76.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
76.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
75.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
75.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
75.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
75.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
75.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
75.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
75.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
75.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
74.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
74.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
74.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
74.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
73.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
73.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
73.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
73.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
72.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
72.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
71.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
71.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
71.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
71.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
70.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
70.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
70.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
70.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
69.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
69.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
68.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
68.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
68.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
68.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
67.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
67.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
67.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
66.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
66.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
65.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
65.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
65.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
65.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
65.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
64.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
64.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
64.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
63.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
62.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
62.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
61.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
61.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
60.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
59.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
59.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
59.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
59.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
59.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
58.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
57.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
57.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
57.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
56.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
56.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
55.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
55.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
54.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
53.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
50.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
50.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
49.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
46.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
45.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
44.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
39.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
39.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
37.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
36.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
36.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
35.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
33.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
32.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
14.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRIM28 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
105.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
433.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
236.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
193.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
175.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
167.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
164.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
158.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
155.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
148.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
143.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
142.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
141.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
129.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
126.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
124.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
123.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
122.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
121.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
120.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
120.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
119.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
118.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
116.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
114.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
114.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
113.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
111.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
111.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
109.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
108.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
108.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
107.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
107.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
107.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
105.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
104.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
104.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
104.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
103.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
103.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
102.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
101.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
100.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
100.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
100.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
100.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
99.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
99.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
99.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
98.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
98.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
97.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
97.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
97.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
97.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
96.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
95.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
95.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
95.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
95.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
95.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
95.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
94.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
94.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
94.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
93.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
93.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
91.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
91.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
90.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
89.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
86.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
85.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
85.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
84.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
83.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
83.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
83.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
82.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
82.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
81.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
79.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
76.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
76.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
74.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
72.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
72.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
71.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
70.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
69.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
68.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
65.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
65.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
62.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
60.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
54.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
54.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
53.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
52.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRIM28 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
116.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
287.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
279.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
266.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
248.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
240.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
234.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
220.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
220.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
218.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
218.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
216.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
214.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
212.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
210.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
209.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
206.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
204.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
199.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
196.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
195.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
194.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
191.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
189.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
189.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
184.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
182.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
181.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
180.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
178.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
176.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
173.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
173.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
172.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
171.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
169.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
168.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
168.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
168.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
168.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
167.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
167.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
165.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
163.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
163.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
163.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
158.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
156.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
156.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
156.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
156.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
155.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
154.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
153.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
152.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
152.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
151.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
151.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
150.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
149.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
149.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
149.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
148.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
146.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
145.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
145.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
144.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
143.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
142.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
142.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
141.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
140.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
139.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
138.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
137.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
137.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
136.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
136.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
136.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
136.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
135.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
134.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
133.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
133.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
132.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
132.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
132.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
132.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
131.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
131.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
131.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
129.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
129.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
128.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
128.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
127.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
127.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
126.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
126.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
126.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
125.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
125.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
125.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
123.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
123.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
122.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
122.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
120.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
120.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
119.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
119.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
119.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
119.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
119.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
118.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
118.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
118.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
118.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
117.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
116.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
116.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
116.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
115.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
114.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
114.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
114.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
114.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
114.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
114.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
114.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
113.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
113.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
112.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
112.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
112.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
111.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
111.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
110.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
110.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
110.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
110.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
110.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
110.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
110.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
109.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
109.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
107.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
107.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
107.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
107.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
106.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
106.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
106.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
106.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
105.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
105.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
105.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
104.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
104.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
104.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
103.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
103.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
102.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
102.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
101.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
100.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
100.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
100.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
99.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
99.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
99.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
99.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
98.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
98.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
98.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
97.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
97.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
97.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
96.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
96.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
95.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
95.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
95.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
94.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
94.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
94.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
94.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
94.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
94.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
93.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
93.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
92.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
92.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
92.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
90.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
90.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
89.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
89.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
89.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
89.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
88.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
87.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
87.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
87.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
87.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
87.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
86.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
85.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
85.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
85.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
85.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
85.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
84.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
84.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
83.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
83.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
83.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
83.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
81.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
81.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
81.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
81.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
80.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
80.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
79.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
79.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
79.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
79.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
77.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
76.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
76.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
75.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
75.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
75.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
74.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
73.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
73.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
73.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
72.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
72.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
72.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
71.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
71.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
70.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
70.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
69.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
68.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
68.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
67.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
67.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
67.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
67.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
66.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
65.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
65.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
64.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
63.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
62.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
61.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
60.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
59.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
59.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
59.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
59.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
57.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
57.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
57.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
56.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
54.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
52.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
51.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
49.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
48.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
48.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
47.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
46.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
45.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
45.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
44.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
42.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
42.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
31.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
29.5
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0017850003
Tumor
0.6
CPT0085670003
Tumor
0.5
CPT0092190003
Normal
0.5
CPT0088970003
Tumor
0.5
CPT0014450004
Tumor
0.5
CPT0079300001
Normal
0.5
CPT0001260009
Tumor
0.5
CPT0084590001
Normal
0.4
CPT0077320001
Normal
0.4
CPT0001340003
Tumor
0.4
CPT0012180003
Tumor
0.4
CPT0012640003
Normal
0.4
CPT0001270001
Normal
0.4
CPT0025880003
Tumor
0.3
CPT0025580004
Tumor
0.3
CPT0065690003
Tumor
0.3
CPT0079180003
Tumor
0.3
CPT0088630003
Tumor
0.3
CPT0084560003
Tumor
0.3
CPT0015910003
Tumor
0.3
CPT0006440003
Tumor
0.3
CPT0026410003
Tumor
0.3
CPT0066470004
Tumor
0.3
CPT0014370004
Tumor
0.3
CPT0010160003
Tumor
0.3
CPT0079510001
Normal
0.3
CPT0088760003
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0088900003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0075170001
Normal
0.2
CPT0092730003
Tumor
0.2
CPT0078660003
Tumor
0.2
CPT0009060003
Tumor
0.2
CPT0010120001
Normal
0.2
CPT0065870003
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0017410003
Tumor
0.2
CPT0000780007
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0075720003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0086870003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0001230001
Normal
0.2
CPT0077490003
Tumor
0.2
CPT0081990003
Tumor
0.2
CPT0088550004
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0063630003
Tumor
0.2
CPT0078990003
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0092790003
Tumor
0.1
CPT0069190001
Normal
0.1
CPT0010110003
Tumor
0.1
CPT0078510003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0012550003
Tumor
0.1
CPT0000660001
Normal
0.1
CPT0001540009
Tumor
0.1
CPT0002350011
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0001180009
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0001510001
Normal
0.1
CPT0025170003
Tumor
0.1
CPT0012920003
Normal
0.1
CPT0025290003
Tumor
0.1
CPT0012080003
Tumor
0.1
CPT0002370001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0014470001
Normal
0.1
CPT0089020003
Tumor
0.1
CPT0092290003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0063320003
Tumor
0.1
CPT0065820001
Normal
0.1
CPT0009020003
Normal
0.1
CPT0000870016
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0015730003
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0086370003
Normal
0.1
CPT0024670003
Tumor
0.1
CPT0011240003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0088570001
Normal
0.1
CPT0001550001
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0086950003
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0092160003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0019990003
Tumor
0.0
CPT0088500001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0019160001
Normal
0.0
CPT0014160003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0007860003
Tumor
0.0
CPT0009000003
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0015810003
Tumor
0.0
CPT0075560003
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0079270003
Tumor
0.0
CPT0025920001
Normal
0.0
CPT0021240003
Tumor
0.0
CPT0025050003
Tumor
0.0
CPT0023350003
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0017450001
Normal
0.0
CPT0086890003
Normal
0.0
CPT0065750003
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0009080003
Normal
0.0
CPT0020130001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0079480003
Tumor
0.0
CPT0077310003
Tumor
0.0
CPT0025610001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0088480003
Tumor
-0.1
CPT0020120003
Tumor
-0.1
CPT0081620001
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0023710001
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0025110003
Tumor
-0.1
CPT0013790003
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0064370003
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0065810003
Tumor
-0.1
CPT0020020001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0069000003
Tumor
-0.1
CPT0078800003
Tumor
-0.1
CPT0000640003
Tumor
-0.1
CPT0012770003
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0076330003
Tumor
-0.1
CPT0006730001
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0088690003
Tumor
-0.1
CPT0065930003
Tumor
-0.1
CPT0001500009
Tumor
-0.1
CPT0001350001
Normal
-0.1
CPT0065450001
Normal
-0.1
CPT0078840001
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0089480003
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0024680001
Normal
-0.2
CPT0012570003
Normal
-0.2
CPT0012280003
Tumor
-0.2
CPT0025060001
Normal
-0.2
CPT0002270011
Tumor
-0.2
CPT0066430001
Normal
-0.2
CPT0026420001
Normal
-0.3
CPT0081880003
Tumor
-0.3
CPT0007320003
Tumor
-0.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
