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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ASS1 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
457.9
Number of samples
349
Samples
Sample
Description
TPM
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
2500.4
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
1667.5
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
1619.8
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
1482.4
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
1419.6
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
1261.4
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
1209.7
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
1201.8
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
1193.8
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
1165.6
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
1134.9
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
1108.3
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
1078.0
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
1067.0
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
1065.6
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
1047.9
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
1001.7
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
981.8
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
970.6
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
970.2
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
965.4
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
927.2
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
898.8
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
895.1
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
893.5
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
872.0
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
870.3
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
867.6
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
865.5
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
852.0
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
848.5
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
845.7
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
841.9
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
840.5
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
838.6
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
820.2
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
805.8
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
796.3
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
796.2
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
787.0
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
759.6
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
757.8
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
747.7
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
742.4
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
738.7
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
727.0
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
724.9
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
718.3
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
715.4
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
712.5
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
696.4
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
686.9
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
680.9
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
677.0
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
672.2
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
667.7
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
667.3
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
663.0
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
655.7
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
650.4
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
649.7
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
647.8
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
647.5
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
646.0
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
644.3
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
641.8
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
641.6
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
640.4
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
634.4
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
630.6
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
628.9
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
627.6
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
625.9
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
624.9
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
618.3
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
613.1
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
612.5
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
612.2
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
608.1
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
599.7
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
599.7
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
598.5
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
594.5
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
593.2
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
592.0
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
587.0
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
583.5
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
582.9
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
576.9
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
576.4
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
573.8
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
570.6
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
568.8
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
563.8
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
563.0
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
562.9
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
560.4
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
559.4
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
552.6
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
551.0
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
550.4
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
549.8
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
544.2
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
542.8
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
541.8
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
541.3
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
539.8
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
535.6
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
535.4
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
529.0
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
528.1
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
526.9
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
524.6
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
523.6
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
521.5
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
518.5
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
518.3
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
515.8
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
512.3
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
510.7
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
510.4
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
506.0
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
503.4
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
502.6
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
499.7
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
498.2
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
496.1
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
491.2
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
489.4
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
487.9
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
485.7
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
483.9
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
480.7
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
479.0
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
475.2
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
474.3
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
472.0
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
470.2
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
468.3
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
465.8
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
465.3
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
464.8
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
464.6
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
464.3
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
463.2
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
459.6
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
458.5
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
454.1
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
450.0
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
443.8
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
443.1
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
440.4
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
438.5
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
436.1
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
432.4
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
430.3
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
426.1
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
425.7
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
424.5
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
424.2
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
420.8
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
417.6
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
417.0
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
415.2
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
413.5
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
413.0
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
407.4
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
406.9
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
404.6
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
404.2
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
401.7
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
400.8
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
399.3
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
397.1
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
394.2
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
394.1
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
389.0
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
381.1
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
379.1
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
378.4
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
377.2
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
375.4
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
373.2
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
371.9
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
371.4
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
370.4
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
368.5
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
367.2
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
366.4
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
366.1
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
365.0
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
362.4
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
362.3
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
362.1
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
361.6
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
359.5
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
358.7
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
354.1
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
352.9
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
350.3
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
349.7
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
349.4
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
347.5
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
347.2
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
347.0
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
343.3
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
343.2
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
340.6
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
340.4
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
340.4
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
337.5
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
335.2
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
334.3
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
333.5
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
331.8
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
328.4
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
323.5
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
322.5
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
321.5
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
320.6
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
319.3
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
318.1
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
317.5
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
316.7
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
316.4
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
315.0
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
314.9
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
314.5
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
314.2
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
314.1
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
313.6
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
313.4
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
313.2
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
310.2
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
308.7
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
308.5
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
307.5
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
307.0
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
306.1
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
304.5
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
303.9
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
303.6
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
302.3
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
301.9
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
300.1
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
297.6
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
296.1
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
295.7
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
293.3
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
293.3
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
293.1
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
292.0
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
290.8
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
289.5
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
287.0
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
286.2
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
286.1
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
285.7
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
284.6
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
280.7
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
276.5
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
275.2
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
275.1
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
274.7
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
274.5
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
269.3
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
267.9
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
267.8
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
265.8
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
263.5
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
257.9
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
256.2
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
252.2
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
249.4
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
248.2
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
246.0
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
243.4
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
242.4
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
239.9
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
239.1
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
236.3
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
235.9
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
234.0
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
232.6
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
229.6
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
229.2
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
226.8
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
220.1
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
219.0
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
217.6
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
216.5
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
213.3
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
210.1
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
210.0
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
209.8
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
209.8
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
208.0
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
206.4
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
205.1
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
204.3
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
201.5
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
200.2
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
197.1
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
194.4
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
190.0
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
187.5
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
185.7
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
184.5
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
183.9
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
182.8
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
179.5
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
174.3
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
174.3
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
169.0
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
167.3
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
166.9
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
164.2
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
160.7
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
155.4
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
155.2
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
150.3
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
150.0
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
149.1
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
146.3
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
145.7
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
144.8
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
139.3
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
130.7
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
127.9
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
126.9
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
123.9
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
122.7
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
121.6
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
113.1
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
111.9
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
109.8
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
92.2
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
88.6
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
76.5
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
61.0
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
59.2
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
59.0
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
56.7
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
42.7
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
37.2
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
33.9
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
29.7
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
26.7
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ASS1 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
567.7
Number of samples
81
Samples
Sample
Description
TPM
DO46602
0 years, female, NA, stage:III, dead, 205 days
2812.1
DO46380
0 years, female, NA, stage:III, dead, 1423 days
1768.2
DO46376
0 years, female, NA, stage:III, dead, 1430 days
1353.8
DO46533
0 years, female, NA, stage:III, alive, 3667 days
1266.0
DO46581
0 years, female, NA, stage:III, dead, 408 days
1199.8
DO46493
0 years, female, NA, stage:IV, alive, 839 days
1180.3
DO46453
0 years, female, NA, stage:III, dead, 3294 days
1172.3
DO46364
0 years, female, NA, stage:III, dead, 806 days
1165.5
DO46408
0 years, female, NA, stage:III, dead, 489 days
1030.6
DO46546
0 years, female, NA, stage:III, dead, 1889 days
1011.8
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
899.6
DO46325
0 years, female, NA, stage:III, dead, 477 days
894.0
DO46551
0 years, female, NA, stage:III, dead, 1055 days
871.8
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
827.4
DO46404
0 years, female, NA, stage:III, dead, 690 days
798.6
DO46333
0 years, female, NA, stage:III, dead, 359 days
797.9
DO46372
0 years, female, NA, stage:III, dead, 1326 days
779.7
DO46354
0 years, female, NA, stage:III, dead, 843 days
764.1
DO46346
0 years, female, NA, stage:III, dead, 1187 days
686.9
DO46560
0 years, female, NA, stage:IV, dead, 286 days
670.1
DO46326
0 years, female, NA, stage:III, dead, 701 days
659.9
DO46386
0 years, female, NA, stage:III, dead, 1162 days
659.0
DO46561
0 years, female, NA, stage:III, dead, 195 days
646.4
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
624.1
DO46328
0 years, female, NA, stage:III, dead, 972 days
622.1
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
619.0
DO46362
0 years, female, NA, stage:III, dead, 1639 days
614.6
DO46576
0 years, female, NA, stage:III, alive, 133 days
601.5
DO46382
0 years, female, NA, stage:IV, dead, 311 days
596.3
DO46332
0 years, female, NA, stage:III, dead, 689 days
595.8
DO46366
0 years, female, NA, stage:III, dead, 2054 days
574.7
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
569.5
DO46468
0 years, female, NA, stage:III, alive, 2776 days
568.2
DO46336
0 years, female, NA, stage:IV, dead, 664 days
557.7
DO46412
0 years, female, NA, stage:III, dead, 597 days
555.0
DO46358
0 years, female, NA, stage:III, dead, 423 days
540.0
DO46388
0 years, female, NA, stage:III, dead, 413 days
521.5
DO46340
0 years, female, NA, stage:III, dead, 616 days
520.5
DO46378
0 years, female, NA, stage:III, alive, 843 days
512.4
DO46368
0 years, female, NA, stage:III, dead, 2879 days
510.0
DO46448
0 years, female, NA, stage:III, dead, 654 days
486.2
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
484.9
DO46344
0 years, female, NA, stage:III, dead, 642 days
463.1
DO46568
0 years, female, NA, stage:III, dead, 320 days
458.3
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
456.5
DO46350
0 years, female, NA, stage:III, dead, 886 days
449.6
DO46392
0 years, female, NA, stage:III, dead, 628 days
432.7
DO46432
0 years, female, NA, stage:III, alive, 2218 days
420.6
DO46538
0 years, female, NA, stage:III, dead, 1527 days
410.0
DO46586
0 years, female, NA, stage:III, dead, 1019 days
400.6
DO46352
0 years, female, NA, stage:III, dead, 677 days
382.9
DO46384
0 years, female, NA, stage:III, dead, 614 days
378.7
DO46370
0 years, female, NA, stage:III, dead, 1727 days
367.9
DO46508
0 years, female, NA, stage:III, dead, 2101 days
362.7
DO46331
0 years, female, NA, stage:III, dead, 612 days
356.1
DO46571
0 years, female, NA, stage:III, dead, 243 days
352.7
DO46611
0 years, female, NA, stage:III, dead, 734 days
322.5
DO46528
0 years, female, NA, stage:III, alive, 6139 days
308.0
DO46597
0 years, female, NA, stage:III, dead, 393 days
305.0
DO46330
0 years, female, NA, stage:III, dead, 684 days
302.3
DO46342
0 years, female, NA, stage:III, dead, 1398 days
301.4
DO46436
0 years, female, NA, stage:III, alive, 3193 days
296.9
DO46329
0 years, female, NA, stage:III, dead, 1699 days
288.0
DO46374
0 years, female, NA, stage:III, dead, 1409 days
280.3
DO46390
0 years, female, NA, stage:III, dead, 374 days
263.5
DO46463
0 years, female, NA, stage:III, dead, 2451 days
262.9
DO46398
0 years, female, NA, stage:III, alive, 437 days
259.5
DO46443
0 years, female, NA, stage:III, dead, 2464 days
254.5
DO46396
0 years, female, NA, stage:III, dead, 583 days
242.2
DO46334
0 years, female, NA, stage:III, dead, 496 days
230.7
DO46606
0 years, female, NA, stage:III, alive, 804 days
228.1
DO46518
0 years, female, NA, stage:III, alive, 2960 days
212.7
DO46356
0 years, female, NA, stage:III, dead, 911 days
208.7
DO46400
0 years, female, NA, stage:III, dead, 719 days
164.2
DO46591
0 years, female, NA, stage:III, dead, 195 days
163.2
DO46327
0 years, female, NA, stage:III, dead, 184 days
151.7
DO46566
0 years, female, NA, stage:III, dead, 673 days
150.0
DO46338
0 years, female, NA, stage:III, dead, 596 days
148.4
DO46348
0 years, female, NA, stage:IV, dead, 287 days
140.2
DO46402
0 years, female, NA, stage:III, dead, 511 days
132.6
DO46588
0 years, female, NA, stage:III, dead, 438 days
91.2
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
0.9
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
0.7
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
0.6
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
0.6
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
0.5
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
0.5
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
0.4
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
0.3
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
0.3
1772e913-f62e-446a-8cf3-720348_D2
Tumor
0.3
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
0.3
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
0.2
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
0.2
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
0.2
2f901c90-617e-46da-9fac-d68369_D2
Tumor
0.2
10c2d629-0287-4511-ac25-f29031_D2
Tumor
0.2
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
0.2
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
0.2
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
0.1
a3a26070-fb84-406a-8280-d555e6_D2
Normal
0.1
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
0.1
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
-0.1
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
-0.1
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
-0.1
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
-0.1
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
-0.1
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
-0.1
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
-0.2
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
-0.2
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
-0.2
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
-0.2
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
-0.2
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
-0.2
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
-0.3
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
-0.3
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
-0.3
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
-0.3
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
-0.3
e9d416e7-f661-400a-896e-388545_D2
Tumor
-0.3
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
-0.3
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
-0.3
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
-0.4
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
-0.4
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
-0.4
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
-0.4
1a10c200-3895-4648-b951-94f99f_D2
Tumor
-0.4
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
-0.4
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
-0.4
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
-0.4
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
-0.4
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
-0.4
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
-0.4
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
-0.4
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
-0.4
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
-0.4
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
-0.5
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
-0.5
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
-0.5
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
-0.5
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
-0.5
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
-0.5
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
-0.5
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
-0.6
21efd60f-6a31-4b98-9477-16a905_D2
Normal
-0.6
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
-0.6
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
-0.6
1db5574d-aca7-403c-8100-6e705f_D2
Normal
-0.6
a65d8e76-640f-4341-a561-afbb57_D2
Normal
-0.6
161317f3-1a39-438e-af45-cd2502_D2
Tumor
-0.7
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
-0.7
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
-0.7
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
-0.7
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
-0.7
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
-0.7
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
-0.7
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
-0.7
285fed94-1495-448e-879b-b55de9_D2
Tumor
-0.7
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
-0.7
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
-0.7
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
-0.8
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
-0.8
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
-0.8
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
-0.8
340a3769-3031-41ae-bb08-a2f696_D2
Normal
-0.8
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
-0.8
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
-0.8
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
-0.8
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
-0.9
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
-0.9
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
-0.9
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
-0.9
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
-0.9
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
-0.9
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
-0.9
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
-1.0
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
-1.0
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
-1.0
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
-1.0
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
-1.0
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
-1.0
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
-1.0
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
-1.0
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
-1.1
15524912-685a-47ce-a824-567848_D2
Tumor
-1.1
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
-1.2
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
-1.2
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
-1.3
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
-1.4
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.