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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ARPC1B is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
227.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
210.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
183.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
121.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
113.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
98.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
70.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
55.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
55.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
49.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
48.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
45.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
44.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
43.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
43.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
43.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
43.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
42.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
41.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
41.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
40.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
40.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
39.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
38.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
37.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
35.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
35.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
33.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
32.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
28.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
28.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
28.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
26.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
24.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
22.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
21.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
21.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
21.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
20.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
20.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
20.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
19.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
19.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
18.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
18.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
18.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
17.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
15.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
14.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
14.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
14.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
14.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
12.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
11.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
10.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ARPC1B is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
106.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
510.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
409.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
353.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
319.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
316.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
299.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
289.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
283.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
280.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
265.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
263.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
255.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
248.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
243.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
243.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
237.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
236.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
230.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
228.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
223.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
223.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
220.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
220.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
219.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
217.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
216.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
209.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
205.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
205.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
204.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
201.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
200.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
195.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
194.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
194.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
194.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
192.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
190.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
189.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
189.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
189.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
186.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
185.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
184.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
181.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
181.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
180.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
180.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
180.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
179.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
179.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
177.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
176.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
175.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
173.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
170.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
170.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
167.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
166.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
166.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
165.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
164.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
164.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
164.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
163.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
162.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
161.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
161.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
161.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
160.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
160.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
159.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
159.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
159.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
158.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
157.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
157.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
157.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
155.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
154.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
154.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
154.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
151.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
151.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
150.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
150.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
150.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
150.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
149.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
149.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
148.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
147.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
146.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
145.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
145.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
145.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
145.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
144.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
144.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
143.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
143.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
142.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
142.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
142.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
142.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
141.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
140.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
139.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
138.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
138.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
138.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
138.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
138.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
137.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
136.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
135.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
134.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
134.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
134.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
134.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
133.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
132.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
132.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
132.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
132.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
131.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
131.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
129.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
129.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
128.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
128.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
128.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
128.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
128.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
128.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
127.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
127.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
127.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
126.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
126.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
126.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
126.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
126.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
125.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
125.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
125.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
124.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
124.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
123.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
123.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
122.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
122.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
121.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
121.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
120.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
120.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
120.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
120.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
120.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
120.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
120.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
119.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
118.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
117.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
117.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
117.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
117.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
117.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
117.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
116.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
116.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
116.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
115.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
115.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
115.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
115.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
115.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
114.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
114.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
114.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
114.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
113.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
112.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
111.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
111.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
111.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
111.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
110.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
110.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
109.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
109.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
109.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
109.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
109.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
108.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
108.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
108.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
108.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
107.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
107.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
107.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
107.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
107.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
106.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
106.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
106.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
106.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
106.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
105.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
104.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
104.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
104.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
103.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
103.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
103.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
102.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
102.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
102.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
102.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
102.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
102.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
102.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
101.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
101.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
101.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
101.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
100.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
100.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
100.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
100.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
100.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
100.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
99.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
99.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
99.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
99.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
99.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
99.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
99.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
98.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
98.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
98.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
97.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
97.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
97.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
96.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
96.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
96.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
96.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
96.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
96.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
96.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
96.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
96.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
96.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
95.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
95.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
95.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
95.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
94.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
94.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
94.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
94.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
94.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
94.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
94.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
93.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
93.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
93.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
93.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
93.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
93.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
93.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
93.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
93.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
93.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
93.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
92.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
92.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
92.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
92.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
92.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
92.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
92.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
92.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
91.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
91.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
91.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
91.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
91.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
90.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
90.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
90.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
90.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
90.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
89.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
89.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
89.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
89.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
89.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
89.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
89.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
88.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
88.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
88.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
88.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
87.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
87.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
87.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
87.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
87.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
87.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
86.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
86.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
86.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
86.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
85.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
85.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
85.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
85.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
85.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
85.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
84.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
84.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
84.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
84.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
84.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
84.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
83.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
83.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
83.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
82.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
82.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
82.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
82.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
82.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
82.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
82.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
81.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
81.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
81.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
81.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
81.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
80.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
80.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
80.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
80.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
80.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
80.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
80.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
80.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
79.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
79.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
78.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
78.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
78.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
78.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
78.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
78.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
78.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
78.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
78.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
77.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
77.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
77.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
77.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
76.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
76.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
76.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
76.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
75.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
75.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
75.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
75.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
75.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
74.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
74.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
74.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
74.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
74.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
73.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
73.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
73.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
73.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
73.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
73.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
73.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
73.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
73.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
73.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
72.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
72.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
71.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
71.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
71.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
71.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
70.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
70.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
70.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
70.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
69.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
69.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
69.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
69.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
68.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
67.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
67.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
67.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
66.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
66.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
66.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
66.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
66.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
66.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
66.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
65.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
65.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
65.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
65.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
64.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
64.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
63.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
63.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
63.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
63.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
63.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
62.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
62.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
62.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
62.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
62.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
62.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
62.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
62.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
62.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
61.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
61.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
61.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
61.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
61.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
60.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
60.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
60.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
60.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
59.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
59.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
59.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
58.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
58.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
57.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
57.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
56.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
56.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
56.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
56.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
56.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
56.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
55.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
55.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
55.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
55.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
54.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
54.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
54.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
54.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
53.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
53.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
52.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
52.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
52.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
51.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
51.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
50.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
49.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
49.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
48.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
48.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
48.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
47.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
47.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
47.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
46.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
46.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
46.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
46.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
46.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
44.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
44.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
43.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
43.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
43.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
42.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
39.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
38.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
38.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
37.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
37.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
35.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
34.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
28.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
28.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
27.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
26.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
26.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
25.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
24.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
24.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
23.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
22.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
21.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
21.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
20.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
19.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
18.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
18.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
17.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
15.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
15.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
13.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
5.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ARPC1B is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
134.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
470.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
347.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
340.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
332.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
327.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
291.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
288.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
278.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
255.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
215.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
214.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
203.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
201.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
199.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
181.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
175.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
175.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
172.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
171.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
166.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
164.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
163.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
157.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
157.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
156.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
155.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
154.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
153.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
153.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
150.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
150.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
145.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
143.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
142.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
142.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
141.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
137.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
136.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
134.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
132.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
131.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
125.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
123.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
119.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
118.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
118.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
118.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
117.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
116.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
116.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
115.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
115.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
112.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
111.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
111.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
110.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
108.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
107.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
107.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
107.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
103.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
103.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
102.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
100.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
98.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
98.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
94.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
93.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
93.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
92.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
90.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
90.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
89.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
89.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
89.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
89.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
88.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
88.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
88.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
86.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
86.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
85.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
84.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
84.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
83.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
78.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
78.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
77.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
75.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
72.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
69.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
68.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
65.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
63.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
52.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
44.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
41.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
31.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
24.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ARPC1B is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
197.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
614.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
600.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
588.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
506.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
466.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
464.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
464.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
462.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
456.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
453.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
427.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
417.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
414.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
412.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
410.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
410.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
396.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
394.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
389.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
370.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
369.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
369.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
369.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
366.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
365.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
361.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
352.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
352.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
352.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
346.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
335.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
333.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
329.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
327.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
327.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
327.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
325.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
321.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
320.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
316.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
315.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
307.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
306.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
305.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
301.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
299.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
298.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
298.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
296.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
295.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
294.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
292.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
290.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
290.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
290.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
289.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
286.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
286.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
284.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
284.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
282.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
281.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
279.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
278.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
278.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
276.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
275.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
275.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
275.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
272.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
267.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
264.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
263.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
261.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
261.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
258.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
257.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
256.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
251.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
251.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
250.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
247.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
243.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
243.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
242.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
236.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
236.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
235.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
234.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
234.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
233.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
232.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
231.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
229.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
229.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
228.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
226.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
225.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
225.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
224.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
223.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
223.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
223.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
223.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
222.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
220.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
218.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
216.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
215.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
215.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
214.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
214.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
212.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
211.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
209.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
208.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
207.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
207.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
207.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
205.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
205.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
204.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
201.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
200.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
199.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
198.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
197.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
197.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
196.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
195.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
194.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
192.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
192.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
191.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
191.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
189.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
187.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
186.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
185.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
184.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
184.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
182.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
182.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
182.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
181.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
181.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
181.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
181.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
179.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
176.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
175.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
175.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
175.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
172.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
170.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
170.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
169.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
169.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
167.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
167.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
165.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
165.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
163.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
162.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
162.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
162.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
159.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
159.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
158.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
158.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
156.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
155.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
155.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
154.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
153.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
152.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
152.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
152.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
149.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
148.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
147.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
147.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
145.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
144.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
143.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
143.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
142.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
142.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
142.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
141.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
139.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
137.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
136.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
136.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
135.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
135.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
133.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
133.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
132.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
130.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
129.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
128.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
126.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
126.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
124.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
121.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
121.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
121.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
120.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
120.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
118.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
114.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
114.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
112.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
112.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
111.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
108.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
108.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
105.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
104.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
103.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
103.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
103.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
100.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
99.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
98.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
97.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
95.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
95.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
94.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
92.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
90.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
89.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
88.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
87.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
82.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
82.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
82.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
82.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
81.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
77.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
74.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
74.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
74.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
72.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
70.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
69.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
69.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
69.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
69.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
68.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
66.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
66.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
65.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
62.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
61.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
60.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
58.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
57.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
57.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
56.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
55.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
55.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
53.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
49.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
44.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
39.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
37.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
37.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
29.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
29.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
25.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
25.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
25.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
13.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
12.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088550004
Tumor
1.8
CPT0084560003
Tumor
1.4
CPT0023350003
Tumor
1.1
CPT0017850003
Tumor
1.1
CPT0012180003
Tumor
1.0
CPT0012550003
Tumor
0.8
CPT0076330003
Tumor
0.8
CPT0010110003
Tumor
0.8
CPT0075130003
Tumor
0.7
CPT0017410003
Tumor
0.7
CPT0088690003
Tumor
0.6
CPT0077320001
Normal
0.6
CPT0079380003
Tumor
0.6
CPT0001540009
Tumor
0.6
CPT0002350011
Tumor
0.6
CPT0025050003
Tumor
0.6
CPT0001180009
Tumor
0.6
CPT0065430003
Tumor
0.6
CPT0092730003
Tumor
0.6
CPT0063630003
Tumor
0.6
CPT0000640003
Tumor
0.6
CPT0066480003
Tumor
0.6
CPT0012670003
Tumor
0.6
CPT0012280003
Tumor
0.6
CPT0086820003
Tumor
0.5
CPT0078800003
Tumor
0.5
CPT0065870003
Tumor
0.5
CPT0081600003
Tumor
0.5
CPT0001260009
Tumor
0.5
CPT0081990003
Tumor
0.5
CPT0001340003
Tumor
0.5
CPT0084590001
Normal
0.5
CPT0011240003
Tumor
0.5
CPT0092190003
Normal
0.5
CPT0078990003
Tumor
0.5
CPT0075170001
Normal
0.5
CPT0015910003
Tumor
0.4
CPT0069160003
Tumor
0.4
CPT0088630003
Tumor
0.4
CPT0088480003
Tumor
0.4
CPT0009060003
Tumor
0.4
CPT0081880003
Tumor
0.4
CPT0001270001
Normal
0.4
CPT0079410003
Tumor
0.4
CPT0085670003
Tumor
0.4
CPT0024670003
Tumor
0.4
CPT0086870003
Tumor
0.4
CPT0012370003
Tumor
0.4
CPT0079270003
Tumor
0.4
CPT0026410003
Tumor
0.3
CPT0069000003
Tumor
0.3
CPT0075720003
Tumor
0.3
CPT0075560003
Tumor
0.3
CPT0077110003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0078830003
Tumor
0.3
CPT0086950003
Tumor
0.3
CPT0007320003
Tumor
0.3
CPT0014450004
Tumor
0.3
CPT0092160003
Tumor
0.3
CPT0021240003
Tumor
0.3
CPT0012080003
Tumor
0.3
CPT0015810003
Tumor
0.3
CPT0002270011
Tumor
0.3
CPT0001220008
Tumor
0.3
CPT0011410003
Tumor
0.2
CPT0025110003
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0019130003
Tumor
0.2
CPT0079230003
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0010120001
Normal
0.2
CPT0092290003
Tumor
0.1
CPT0088570001
Normal
0.1
CPT0014160003
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0069190001
Normal
0.1
CPT0007860003
Tumor
0.1
CPT0065820001
Normal
0.1
CPT0075570001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0071150004
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0086030003
Tumor
0.1
CPT0077310003
Tumor
0.1
CPT0089020003
Tumor
0.0
CPT0078510003
Tumor
0.0
CPT0000780007
Tumor
0.0
CPT0088900003
Tumor
0.0
CPT0077490003
Tumor
0.0
CPT0064370003
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0079510001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0020120003
Tumor
0.0
CPT0014370004
Tumor
0.0
CPT0009000003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0010160003
Tumor
0.0
CPT0006900003
Tumor
0.0
CPT0025170003
Tumor
-0.1
CPT0015730003
Tumor
-0.1
CPT0014470001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0065930003
Tumor
-0.1
CPT0063320003
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0018250001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0006440003
Tumor
-0.1
CPT0000890001
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0065810003
Tumor
-0.1
CPT0063640001
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0065750003
Tumor
-0.1
CPT0012920003
Normal
-0.2
CPT0079300001
Normal
-0.2
CPT0012900004
Tumor
-0.2
CPT0024680001
Normal
-0.2
CPT0014130001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0088970003
Tumor
-0.2
CPT0089040001
Normal
-0.2
CPT0012640003
Normal
-0.2
CPT0009020003
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0006630003
Tumor
-0.3
CPT0023360001
Normal
-0.3
CPT0014350001
Normal
-0.3
CPT0092790003
Tumor
-0.3
CPT0001550001
Normal
-0.3
CPT0001510001
Normal
-0.3
CPT0063330001
Normal
-0.3
CPT0012090003
Normal
-0.3
CPT0019160001
Normal
-0.3
CPT0006730001
Normal
-0.3
CPT0078930003
Tumor
-0.3
CPT0092800003
Normal
-0.3
CPT0088920001
Normal
-0.3
CPT0078530001
Normal
-0.3
CPT0002370001
Normal
-0.3
CPT0012570003
Normal
-0.3
CPT0020130001
Normal
-0.3
CPT0077500001
Normal
-0.4
CPT0026420001
Normal
-0.4
CPT0092310003
Normal
-0.4
CPT0087050003
Normal
-0.4
CPT0086970003
Normal
-0.4
CPT0069010001
Normal
-0.4
CPT0025610001
Normal
-0.4
CPT0066470004
Tumor
-0.4
CPT0092740003
Normal
-0.4
CPT0025580004
Tumor
-0.4
CPT0006950001
Normal
-0.4
CPT0001350001
Normal
-0.4
CPT0001500009
Tumor
-0.4
CPT0078670001
Normal
-0.4
CPT0025920001
Normal
-0.4
CPT0007870001
Normal
-0.4
CPT0088500001
Normal
-0.4
CPT0086370003
Normal
-0.4
CPT0086890003
Normal
-0.5
CPT0081620001
Normal
-0.5
CPT0079000001
Normal
-0.5
CPT0001230001
Normal
-0.5
CPT0007470001
Normal
-0.5
CPT0020020001
Normal
-0.5
CPT0078660003
Tumor
-0.5
CPT0066430001
Normal
-0.5
CPT0079430001
Normal
-0.5
CPT0078940001
Normal
-0.5
CPT0009080003
Normal
-0.5
CPT0000790001
Normal
-0.5
CPT0065450001
Normal
-0.5
CPT0010170001
Normal
-0.6
CPT0078840001
Normal
-0.6
CPT0089460004
Tumor
-0.6
CPT0089480003
Normal
-0.6
CPT0088640003
Normal
-0.6
CPT0064400001
Normal
-0.6
CPT0088780001
Normal
-0.7
CPT0012770003
Normal
-0.7
CPT0023710001
Normal
-0.7
CPT0079180003
Tumor
-0.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
