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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
AFDN is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
109.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
73.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
68.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
64.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
56.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
56.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
54.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
53.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
50.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
42.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
41.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
39.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
39.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
39.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
38.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
38.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
37.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
34.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
33.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
33.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
33.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
31.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
31.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
31.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
31.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
30.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
28.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
28.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
27.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
27.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
26.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
26.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
25.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
25.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
25.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
23.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
23.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
22.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
22.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
22.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
22.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
22.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
21.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
20.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
20.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
19.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
19.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
18.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
16.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
15.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
14.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
13.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
13.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
13.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
11.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
11.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
10.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
9.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
9.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
9.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
8.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
5.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
4.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
AFDN is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
32.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
123.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
111.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
108.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
108.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
104.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
88.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
87.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
86.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
85.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
85.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
85.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
84.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
83.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
80.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
78.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
76.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
76.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
75.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
72.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
72.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
72.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
70.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
67.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
67.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
67.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
67.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
66.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
66.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
66.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
65.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
65.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
65.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
64.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
64.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
63.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
63.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
63.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
63.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
62.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
62.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
62.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
62.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
60.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
60.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
60.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
59.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
59.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
59.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
59.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
58.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
58.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
57.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
57.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
57.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
57.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
57.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
56.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
56.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
56.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
56.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
56.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
55.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
55.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
55.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
55.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
55.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
54.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
54.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
54.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
53.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
53.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
53.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
53.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
53.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
53.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
53.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
52.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
51.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
51.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
51.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
51.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
51.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
50.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
50.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
50.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
49.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
49.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
49.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
49.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
49.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
49.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
48.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
48.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
48.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
48.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
47.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
47.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
47.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
47.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
47.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
47.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
46.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
46.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
46.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
46.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
46.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
46.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
46.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
45.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
45.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
45.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
45.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
45.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
45.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
45.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
45.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
45.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
45.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
44.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
44.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
44.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
44.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
44.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
43.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
43.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
43.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
43.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
43.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
43.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
43.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
43.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
42.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
42.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
42.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
42.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
42.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
42.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
42.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
42.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
42.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
42.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
42.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
41.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
41.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
41.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
41.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
41.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
41.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
41.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
41.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
41.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
40.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
40.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
40.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
40.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
40.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
40.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
40.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
40.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
40.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
40.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
40.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
39.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
39.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
39.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
39.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
39.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
39.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
39.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
39.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
39.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
39.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
38.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
38.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
38.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
38.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
38.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
38.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
38.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
38.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
38.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
38.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
38.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
38.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
37.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
37.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
37.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
37.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
37.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
37.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
37.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
37.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
37.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
37.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
36.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
36.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
36.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
36.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
36.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
36.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
36.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
36.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
36.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
36.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
36.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
36.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
36.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
35.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
35.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
35.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
35.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
35.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
35.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
35.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
35.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
34.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
34.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
34.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
34.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
34.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
34.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
33.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
33.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
33.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
33.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
33.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
33.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
33.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
33.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
33.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
33.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
33.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
32.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
32.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
32.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
32.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
32.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
32.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
32.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
32.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
32.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
32.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
31.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
31.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
31.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
31.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
31.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
31.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
31.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
31.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
31.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
30.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
30.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
30.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
30.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
30.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
30.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
29.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
29.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
29.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
29.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
29.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
29.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
29.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
28.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
28.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
28.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
28.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
28.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
28.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
28.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
28.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
28.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
28.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
28.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
28.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
28.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
28.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
27.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
27.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
27.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
27.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
27.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
27.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
27.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
27.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
27.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
27.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
27.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
27.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
27.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
27.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
27.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
27.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
27.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
27.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
26.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
26.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
26.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
26.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
26.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
26.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
26.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
26.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
26.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
25.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
25.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
25.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
25.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
25.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
25.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
25.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
25.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
25.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
25.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
25.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
25.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
25.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
25.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
24.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
24.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
24.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
24.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
24.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
24.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
24.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
24.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
23.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
23.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
23.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
23.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
23.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
23.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
23.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
22.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
22.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
22.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
22.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
22.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
22.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
22.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
22.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
22.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
22.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
22.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
22.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
21.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
21.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
21.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
21.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
21.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
21.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
21.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
21.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
20.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
20.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
20.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
20.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
20.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
20.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
20.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
20.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
20.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
20.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
20.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
20.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
20.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
19.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
19.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
19.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
19.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
19.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
19.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
19.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
19.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
18.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
18.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
18.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
18.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
18.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
18.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
18.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
18.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
18.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
18.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
18.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
17.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
17.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
17.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
17.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
17.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
17.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
17.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
17.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
17.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
17.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
17.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
17.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
16.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
16.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
16.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
16.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
16.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
16.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
16.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
16.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
16.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
16.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
16.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
16.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
16.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
16.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
16.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
15.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
15.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
15.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
15.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
15.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
15.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
15.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
15.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
15.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
15.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
14.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
14.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
14.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
14.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
14.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
14.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
14.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
14.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
14.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
14.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
14.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
14.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
14.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
14.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
13.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
13.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
13.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
13.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
13.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
13.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
13.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
13.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
13.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
13.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
13.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
12.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
12.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
12.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
12.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
12.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
12.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
12.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
12.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
12.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
12.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
12.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
12.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
11.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
11.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
11.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
11.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
11.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
11.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
11.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
11.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
10.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
10.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
10.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
10.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
10.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
10.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
10.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
10.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
10.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
10.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
9.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
9.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
9.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
9.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
9.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
9.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
9.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
9.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
9.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
8.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
8.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
8.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
8.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
8.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
8.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
8.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
7.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
7.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
7.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
7.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
7.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
6.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
6.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
6.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
6.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
6.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
5.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
5.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
4.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
4.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
4.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
3.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
3.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
3.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
3.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
1.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
AFDN is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
149.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
126.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
113.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
113.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
108.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
88.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
85.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
82.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
78.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
77.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
76.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
75.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
71.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
69.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
69.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
68.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
68.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
67.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
67.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
66.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
66.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
63.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
63.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
63.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
61.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
60.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
58.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
57.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
55.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
55.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
54.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
53.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
53.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
53.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
53.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
51.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
51.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
49.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
49.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
48.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
47.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
47.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
47.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
47.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
47.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
46.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
45.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
45.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
43.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
42.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
42.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
41.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
41.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
41.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
40.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
40.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
39.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
39.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
37.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
37.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
37.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
37.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
36.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
36.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
35.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
35.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
35.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
34.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
34.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
33.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
32.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
32.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
32.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
32.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
32.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
31.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
30.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
29.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
29.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
28.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
27.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
26.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
25.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
25.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
23.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
23.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
22.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
22.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
21.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
21.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
21.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
20.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
20.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
19.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
13.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
10.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
10.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
8.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
7.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
AFDN is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
37.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
158.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
154.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
151.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
138.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
134.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
131.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
130.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
121.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
116.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
108.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
102.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
102.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
100.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
96.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
95.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
93.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
92.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
88.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
84.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
82.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
79.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
75.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
74.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
73.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
72.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
72.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
70.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
69.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
69.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
69.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
69.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
69.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
69.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
68.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
68.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
67.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
66.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
64.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
63.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
63.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
63.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
63.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
62.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
61.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
60.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
60.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
60.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
59.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
59.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
58.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
58.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
57.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
56.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
56.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
55.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
55.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
54.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
54.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
53.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
53.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
53.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
52.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
51.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
51.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
51.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
51.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
51.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
50.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
50.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
49.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
49.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
48.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
48.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
48.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
48.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
47.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
47.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
46.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
46.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
46.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
46.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
45.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
44.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
44.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
43.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
43.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
43.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
43.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
43.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
42.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
42.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
42.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
42.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
41.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
41.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
41.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
41.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
40.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
40.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
40.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
40.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
40.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
39.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
39.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
39.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
38.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
38.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
38.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
37.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
37.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
37.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
37.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
37.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
36.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
36.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
36.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
36.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
36.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
36.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
36.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
35.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
35.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
35.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
34.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
34.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
34.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
34.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
34.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
33.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
33.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
33.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
33.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
32.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
32.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
32.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
32.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
32.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
32.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
31.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
31.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
31.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
31.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
31.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
31.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
31.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
31.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
30.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
30.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
30.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
30.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
30.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
30.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
30.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
30.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
30.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
29.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
29.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
29.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
28.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
28.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
28.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
28.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
28.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
28.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
28.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
27.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
27.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
26.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
26.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
26.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
26.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
26.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
26.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
26.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
25.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
25.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
25.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
25.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
25.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
25.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
24.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
24.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
24.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
24.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
24.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
24.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
23.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
23.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
23.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
22.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
22.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
21.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
21.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
21.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
21.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
20.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
20.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
20.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
19.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
19.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
19.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
19.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
18.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
18.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
18.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
18.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
18.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
18.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
17.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
17.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
17.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
17.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
16.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
16.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
16.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
16.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
16.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
16.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
16.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
15.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
15.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
15.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
14.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
14.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
14.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
14.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
14.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
13.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
13.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
13.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
13.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
13.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
13.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
13.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
13.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
13.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
13.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
12.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
12.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
12.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
12.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
11.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
11.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
11.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
10.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
10.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
10.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
10.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
10.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
10.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
10.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
9.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
9.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
9.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
9.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
9.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
8.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
8.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
8.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
8.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
8.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
8.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
8.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
7.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
6.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
6.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
6.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
6.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
6.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
5.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
5.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
5.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
5.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
5.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
4.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
4.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
4.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
4.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
3.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
3.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
2.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.1
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
0.6
CPT0069160003
Tumor
0.6
CPT0085670003
Tumor
0.3
CPT0001220008
Tumor
0.3
CPT0015730003
Tumor
0.3
CPT0007320003
Tumor
0.3
CPT0088900003
Tumor
0.3
CPT0092800003
Normal
0.3
CPT0065450001
Normal
0.3
CPT0079480003
Tumor
0.3
CPT0077140001
Normal
0.3
CPT0006630003
Tumor
0.3
CPT0078830003
Tumor
0.3
CPT0025060001
Normal
0.3
CPT0025350003
Tumor
0.3
CPT0066430001
Normal
0.3
CPT0014350001
Normal
0.3
CPT0088970003
Tumor
0.2
CPT0023710001
Normal
0.2
CPT0021240003
Tumor
0.2
CPT0092310003
Normal
0.2
CPT0063320003
Tumor
0.2
CPT0002270011
Tumor
0.2
CPT0077500001
Normal
0.2
CPT0092740003
Normal
0.2
CPT0025580004
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0086970003
Normal
0.2
CPT0087050003
Normal
0.2
CPT0088690003
Tumor
0.2
CPT0076350001
Normal
0.2
CPT0078840001
Normal
0.2
CPT0012570003
Normal
0.2
CPT0000780007
Tumor
0.2
CPT0012090003
Normal
0.2
CPT0001230001
Normal
0.2
CPT0019130003
Tumor
0.2
CPT0006730001
Normal
0.2
CPT0007470001
Normal
0.2
CPT0009080003
Normal
0.2
CPT0007870001
Normal
0.2
CPT0086890003
Normal
0.2
CPT0079510001
Normal
0.2
CPT0089480003
Normal
0.2
CPT0063640001
Normal
0.2
CPT0079000001
Normal
0.2
CPT0078990003
Tumor
0.2
CPT0000790001
Normal
0.2
CPT0020020001
Normal
0.2
CPT0069000003
Tumor
0.2
CPT0086370003
Normal
0.2
CPT0077490003
Tumor
0.2
CPT0064400001
Normal
0.2
CPT0087040003
Tumor
0.2
CPT0069010001
Normal
0.2
CPT0025610001
Normal
0.2
CPT0006950001
Normal
0.2
CPT0071150004
Tumor
0.2
CPT0025920001
Normal
0.2
CPT0012770003
Normal
0.2
CPT0088710001
Normal
0.2
CPT0075570001
Normal
0.2
CPT0026420001
Normal
0.2
CPT0001190001
Normal
0.2
CPT0088780001
Normal
0.2
CPT0014130001
Normal
0.2
CPT0009020003
Normal
0.1
CPT0066470004
Tumor
0.1
CPT0079300001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0078530001
Normal
0.1
CPT0065820001
Normal
0.1
CPT0079430001
Normal
0.1
CPT0089020003
Tumor
0.1
CPT0012640003
Normal
0.1
CPT0081620001
Normal
0.1
CPT0078940001
Normal
0.1
CPT0077310003
Tumor
0.1
CPT0023360001
Normal
0.1
CPT0020130001
Normal
0.1
CPT0000890001
Normal
0.1
CPT0088760003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0088640003
Normal
0.1
CPT0010160003
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0000640003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0078670001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0006900003
Tumor
0.1
CPT0082010001
Normal
0.1
CPT0064370003
Tumor
0.1
CPT0017410003
Tumor
0.1
CPT0010170001
Normal
0.1
CPT0088920001
Normal
0.1
CPT0019990003
Tumor
0.1
CPT0086830003
Normal
0.1
CPT0089040001
Normal
0.1
CPT0011240003
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0017450001
Normal
0.1
CPT0019160001
Normal
0.1
CPT0065870003
Tumor
0.1
CPT0063330001
Normal
0.1
CPT0002370001
Normal
0.1
CPT0010110003
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0079180003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0012920003
Normal
0.0
CPT0001550001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0001540009
Tumor
0.0
CPT0025880003
Tumor
0.0
CPT0078930003
Tumor
0.0
CPT0075720003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0012900004
Tumor
0.0
CPT0025230003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0015910003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0010120001
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0025110003
Tumor
0.0
CPT0092730003
Tumor
0.0
CPT0086030003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0001270001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0020120003
Tumor
0.0
CPT0063630003
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0086870003
Tumor
-0.1
CPT0078510003
Tumor
-0.1
CPT0077320001
Normal
-0.1
CPT0092290003
Tumor
-0.1
CPT0014450004
Tumor
-0.1
CPT0078660003
Tumor
-0.1
CPT0014470001
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0084590001
Normal
-0.1
CPT0092160003
Tumor
-0.1
CPT0025290003
Tumor
-0.1
CPT0011410003
Tumor
-0.1
CPT0065690003
Tumor
-0.1
CPT0007860003
Tumor
-0.1
CPT0079410003
Tumor
-0.1
CPT0012080003
Tumor
-0.1
CPT0009060003
Tumor
-0.1
CPT0081600003
Tumor
-0.1
CPT0081990003
Tumor
-0.1
CPT0014160003
Tumor
-0.1
CPT0092790003
Tumor
-0.1
CPT0065750003
Tumor
-0.2
CPT0078800003
Tumor
-0.2
CPT0025050003
Tumor
-0.2
CPT0015810003
Tumor
-0.2
CPT0014370004
Tumor
-0.2
CPT0065810003
Tumor
-0.2
CPT0012370003
Tumor
-0.2
CPT0001500009
Tumor
-0.2
CPT0024670003
Tumor
-0.2
CPT0084560003
Tumor
-0.2
CPT0086820003
Tumor
-0.2
CPT0092190003
Normal
-0.2
CPT0066480003
Tumor
-0.2
CPT0001260009
Tumor
-0.3
CPT0088480003
Tumor
-0.3
CPT0075560003
Tumor
-0.3
CPT0089460004
Tumor
-0.3
CPT0086950003
Tumor
-0.3
CPT0088630003
Tumor
-0.3
CPT0065930003
Tumor
-0.3
CPT0012280003
Tumor
-0.3
CPT0079380003
Tumor
-0.4
CPT0001180009
Tumor
-0.4
CPT0002350011
Tumor
-0.4
CPT0075130003
Tumor
-0.4
CPT0081880003
Tumor
-0.4
CPT0026410003
Tumor
-0.4
CPT0023350003
Tumor
-0.5
CPT0017850003
Tumor
-0.5
CPT0012550003
Tumor
-0.6
CPT0077110003
Tumor
-0.6
CPT0012670003
Tumor
-0.7
CPT0076330003
Tumor
-0.9
CPT0012180003
Tumor
-0.9
CPT0088550004
Tumor
-1.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
