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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNX9 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
61.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
56.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
55.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
55.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
36.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
36.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
36.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
35.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
35.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
35.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
34.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
33.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
32.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
32.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
32.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
31.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
30.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
29.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
29.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
28.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
28.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
27.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
27.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
27.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
26.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
25.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
23.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
23.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
22.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
21.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
21.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
21.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
20.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
19.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
18.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
18.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
17.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
17.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
17.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
17.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
17.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
16.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
16.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
16.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
16.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
16.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
14.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
14.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
14.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
13.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
13.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
13.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
13.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
13.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
12.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
12.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
12.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
12.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
12.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
11.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
11.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
9.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
8.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNX9 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
78.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
62.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
56.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
53.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
53.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
53.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
52.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
51.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
51.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
50.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
49.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
48.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
48.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
47.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
46.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
45.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
44.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
44.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
44.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
44.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
44.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
43.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
43.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
43.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
43.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
43.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
43.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
43.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
43.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
42.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
42.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
42.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
42.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
42.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
42.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
42.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
42.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
41.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
41.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
40.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
40.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
40.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
40.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
40.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
39.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
39.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
39.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
39.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
39.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
39.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
38.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
38.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
38.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
38.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
38.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
38.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
38.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
38.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
38.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
38.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
38.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
37.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
37.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
37.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
37.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
37.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
37.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
37.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
37.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
37.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
36.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
36.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
36.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
36.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
36.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
36.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
36.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
36.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
36.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
35.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
35.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
35.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
35.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
35.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
35.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
35.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
35.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
35.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
35.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
35.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
34.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
34.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
34.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
34.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
34.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
34.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
34.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
34.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
34.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
34.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
34.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
34.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
34.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
34.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
34.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
33.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
33.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
33.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
33.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
33.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
33.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
33.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
33.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
33.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
33.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
33.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
33.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
33.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
33.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
33.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
33.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
33.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
33.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
33.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
33.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
32.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
32.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
32.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
32.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
32.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
32.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
32.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
32.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
32.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
32.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
32.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
32.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
32.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
32.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
32.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
32.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
32.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
32.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
31.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
31.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
31.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
31.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
31.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
31.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
31.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
31.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
31.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
31.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
31.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
31.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
31.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
31.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
31.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
30.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
30.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
30.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
30.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
30.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
30.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
30.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
30.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
30.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
30.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
30.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
30.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
30.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
30.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
30.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
30.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
30.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
30.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
30.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
30.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
29.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
29.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
29.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
29.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
29.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
29.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
29.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
29.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
29.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
29.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
29.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
29.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
29.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
29.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
29.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
29.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
29.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
28.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
28.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
28.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
28.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
28.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
28.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
28.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
28.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
28.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
28.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
28.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
28.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
28.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
28.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
28.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
28.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
28.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
28.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
28.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
28.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
28.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
27.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
27.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
27.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
27.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
27.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
27.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
27.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
27.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
27.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
27.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
27.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
27.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
27.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
27.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
27.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
27.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
27.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
27.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
27.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
27.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
27.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
27.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
27.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
27.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
27.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
26.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
26.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
26.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
26.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
26.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
26.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
26.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
26.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
26.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
26.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
26.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
26.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
26.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
26.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
26.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
26.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
26.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
26.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
25.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
25.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
25.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
25.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
25.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
25.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
25.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
25.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
25.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
25.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
25.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
25.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
25.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
25.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
25.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
25.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
25.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
25.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
25.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
24.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
24.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
24.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
24.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
24.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
24.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
24.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
24.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
24.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
24.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
24.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
24.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
24.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
24.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
24.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
24.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
24.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
24.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
24.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
23.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
23.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
23.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
23.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
23.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
23.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
23.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
23.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
23.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
23.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
23.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
23.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
23.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
23.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
23.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
23.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
23.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
23.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
22.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
22.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
22.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
22.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
22.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
22.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
22.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
22.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
22.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
22.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
22.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
22.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
22.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
22.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
22.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
22.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
21.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
21.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
21.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
21.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
21.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
21.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
21.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
21.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
21.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
21.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
21.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
21.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
21.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
21.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
21.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
21.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
21.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
21.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
21.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
20.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
20.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
20.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
20.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
20.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
20.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
20.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
20.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
20.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
20.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
20.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
20.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
20.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
20.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
20.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
20.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
20.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
20.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
20.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
20.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
20.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
20.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
19.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
19.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
19.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
19.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
19.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
19.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
19.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
19.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
19.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
19.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
19.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
19.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
19.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
18.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
18.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
18.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
18.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
18.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
18.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
18.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
18.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
18.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
18.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
18.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
18.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
18.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
18.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
18.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
18.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
18.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
18.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
18.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
17.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
17.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
17.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
17.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
17.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
17.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
17.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
17.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
17.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
17.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
17.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
17.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
17.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
17.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
17.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
17.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
17.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
17.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
17.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
17.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
16.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
16.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
16.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
16.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
16.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
16.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
16.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
16.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
16.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
16.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
16.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
16.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
16.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
16.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
16.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
16.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
16.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
15.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
15.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
15.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
15.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
15.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
15.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
15.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
15.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
15.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
15.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
15.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
15.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
15.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
15.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
15.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
15.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
15.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
14.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
14.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
14.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
14.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
14.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
14.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
14.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
14.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
14.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
14.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
14.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
14.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
13.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
13.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
13.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
13.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
13.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
13.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
13.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
13.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
13.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
13.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
12.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
12.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
12.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
12.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
12.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
12.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
11.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
11.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
11.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
11.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
11.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
11.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
11.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
11.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
11.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
11.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
10.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
10.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
10.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
10.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
10.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
10.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
10.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
10.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
9.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
9.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
9.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
9.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
9.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
9.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
8.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
7.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
7.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
7.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
7.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
5.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
5.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
4.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
4.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNX9 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
61.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
50.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
47.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
44.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
44.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
44.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
42.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
42.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
41.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
40.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
40.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
40.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
39.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
37.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
37.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
37.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
36.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
35.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
35.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
35.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
35.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
34.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
34.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
34.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
34.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
34.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
33.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
33.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
33.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
33.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
33.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
33.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
33.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
32.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
32.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
32.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
31.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
31.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
31.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
30.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
30.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
29.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
29.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
29.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
28.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
28.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
28.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
27.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
27.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
27.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
27.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
27.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
26.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
26.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
26.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
26.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
25.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
25.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
25.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
25.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
25.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
25.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
24.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
24.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
23.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
22.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
22.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
22.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
22.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
21.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
21.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
21.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
21.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
21.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
21.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
21.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
20.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
20.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
19.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
19.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
19.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
18.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
18.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
18.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
18.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
17.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
17.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
16.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
14.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
14.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
14.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
14.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
13.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
11.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
11.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
10.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
10.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
9.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
8.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNX9 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
68.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
64.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
64.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
60.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
58.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
57.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
56.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
56.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
56.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
55.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
55.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
55.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
55.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
54.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
54.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
54.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
54.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
53.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
52.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
51.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
51.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
51.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
50.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
50.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
50.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
50.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
49.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
49.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
48.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
48.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
47.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
47.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
46.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
46.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
45.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
45.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
44.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
44.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
44.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
44.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
43.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
42.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
42.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
41.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
41.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
41.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
40.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
40.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
40.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
40.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
39.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
39.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
39.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
38.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
38.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
38.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
38.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
38.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
38.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
38.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
37.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
37.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
37.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
37.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
37.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
37.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
37.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
36.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
36.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
36.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
35.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
35.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
35.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
35.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
35.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
34.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
34.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
34.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
34.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
34.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
34.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
33.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
33.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
33.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
33.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
33.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
32.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
32.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
32.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
32.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
32.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
32.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
32.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
32.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
32.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
32.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
32.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
32.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
31.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
31.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
31.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
31.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
31.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
31.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
31.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
31.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
30.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
30.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
30.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
30.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
30.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
29.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
29.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
29.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
29.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
29.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
29.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
29.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
29.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
29.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
29.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
29.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
29.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
29.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
29.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
28.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
28.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
28.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
28.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
28.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
28.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
28.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
28.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
28.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
28.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
28.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
28.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
27.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
27.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
27.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
27.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
27.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
27.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
27.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
27.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
27.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
26.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
26.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
26.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
26.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
26.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
26.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
26.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
25.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
25.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
25.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
25.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
25.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
25.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
25.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
25.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
25.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
25.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
25.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
25.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
24.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
24.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
24.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
24.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
24.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
24.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
24.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
24.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
24.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
24.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
24.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
24.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
24.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
23.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
23.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
23.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
23.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
23.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
23.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
23.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
22.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
22.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
22.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
22.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
22.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
22.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
22.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
22.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
22.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
22.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
22.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
21.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
21.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
21.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
21.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
21.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
21.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
21.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
21.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
21.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
20.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
20.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
20.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
20.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
20.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
20.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
20.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
20.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
19.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
19.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
19.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
19.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
19.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
19.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
19.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
19.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
19.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
19.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
19.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
19.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
19.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
19.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
19.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
19.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
19.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
19.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
19.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
18.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
18.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
18.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
18.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
18.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
18.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
18.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
18.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
18.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
17.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
17.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
17.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
16.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
16.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
16.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
16.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
15.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
15.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
15.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
15.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
15.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
15.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
15.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
14.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
14.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
14.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
14.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
13.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
13.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
13.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
13.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
13.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
12.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
12.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
11.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
10.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
9.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
9.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
8.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
8.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
7.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
7.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
6.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
6.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
6.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
5.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
5.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
4.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
4.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0011240003
Tumor
0.5
CPT0089480003
Normal
0.4
CPT0001190001
Normal
0.4
CPT0001350001
Normal
0.4
CPT0079430001
Normal
0.4
CPT0092800003
Normal
0.4
CPT0012570003
Normal
0.4
CPT0075570001
Normal
0.4
CPT0012090003
Normal
0.4
CPT0000890001
Normal
0.4
CPT0088920001
Normal
0.4
CPT0088780001
Normal
0.4
CPT0063640001
Normal
0.4
CPT0025060001
Normal
0.4
CPT0000660001
Normal
0.4
CPT0010120001
Normal
0.4
CPT0086890003
Normal
0.4
CPT0006530001
Normal
0.4
CPT0088550004
Tumor
0.4
CPT0076350001
Normal
0.4
CPT0020130001
Normal
0.3
CPT0025610001
Normal
0.3
CPT0082010001
Normal
0.3
CPT0088710001
Normal
0.3
CPT0066430001
Normal
0.3
CPT0000790001
Normal
0.3
CPT0006950001
Normal
0.3
CPT0012290003
Normal
0.3
CPT0078840001
Normal
0.3
CPT0079000001
Normal
0.3
CPT0014350001
Normal
0.3
CPT0006730001
Normal
0.3
CPT0026420001
Normal
0.3
CPT0018250001
Normal
0.3
CPT0007470001
Normal
0.3
CPT0012770003
Normal
0.3
CPT0087050003
Normal
0.3
CPT0065450001
Normal
0.3
CPT0023360001
Normal
0.3
CPT0078940001
Normal
0.3
CPT0014130001
Normal
0.3
CPT0077500001
Normal
0.3
CPT0023710001
Normal
0.3
CPT0077140001
Normal
0.3
CPT0066480003
Tumor
0.3
CPT0065820001
Normal
0.3
CPT0017450001
Normal
0.3
CPT0088640003
Normal
0.3
CPT0007870001
Normal
0.3
CPT0024680001
Normal
0.3
CPT0089040001
Normal
0.3
CPT0086830003
Normal
0.3
CPT0081620001
Normal
0.3
CPT0063330001
Normal
0.2
CPT0078800003
Tumor
0.2
CPT0001270001
Normal
0.2
CPT0086370003
Normal
0.2
CPT0013790003
Normal
0.2
CPT0086970003
Normal
0.2
CPT0010170001
Normal
0.2
CPT0009080003
Normal
0.2
CPT0092310003
Normal
0.2
CPT0006630003
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0092740003
Normal
0.2
CPT0088570001
Normal
0.2
CPT0088900003
Tumor
0.2
CPT0075170001
Normal
0.2
CPT0078670001
Normal
0.2
CPT0064400001
Normal
0.2
CPT0019130003
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0020020001
Normal
0.2
CPT0069010001
Normal
0.2
CPT0014470001
Normal
0.2
CPT0012080003
Tumor
0.2
CPT0088500001
Normal
0.1
CPT0081990003
Tumor
0.1
CPT0001230001
Normal
0.1
CPT0012920003
Normal
0.1
CPT0002370001
Normal
0.1
CPT0075720003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0019160001
Normal
0.1
CPT0092190003
Normal
0.1
CPT0066520001
Normal
0.1
CPT0025920001
Normal
0.1
CPT0001550001
Normal
0.1
CPT0009060003
Tumor
0.1
CPT0002270011
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0012640003
Normal
0.1
CPT0079300001
Normal
0.1
CPT0077490003
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0077320001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0009020003
Normal
0.1
CPT0078930003
Tumor
0.0
CPT0078990003
Tumor
0.0
CPT0007320003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0010110003
Tumor
0.0
CPT0001540009
Tumor
0.0
CPT0079270003
Tumor
0.0
CPT0025110003
Tumor
0.0
CPT0025880003
Tumor
0.0
CPT0007860003
Tumor
0.0
CPT0071150004
Tumor
0.0
CPT0079510001
Normal
0.0
CPT0092730003
Tumor
0.0
CPT0064370003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0025350003
Tumor
0.0
CPT0012670003
Tumor
0.0
CPT0021240003
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0088760003
Tumor
-0.1
CPT0081600003
Tumor
-0.1
CPT0015910003
Tumor
-0.1
CPT0088630003
Tumor
-0.1
CPT0069000003
Tumor
-0.1
CPT0017410003
Tumor
-0.1
CPT0086030003
Tumor
-0.1
CPT0001500009
Tumor
-0.1
CPT0020120003
Tumor
-0.1
CPT0001340003
Tumor
-0.1
CPT0079480003
Tumor
-0.1
CPT0085670003
Tumor
-0.1
CPT0000640003
Tumor
-0.1
CPT0012900004
Tumor
-0.1
CPT0006900003
Tumor
-0.1
CPT0025290003
Tumor
-0.1
CPT0084560003
Tumor
-0.1
CPT0078510003
Tumor
-0.1
CPT0010160003
Tumor
-0.1
CPT0088970003
Tumor
-0.1
CPT0023690003
Tumor
-0.2
CPT0000780007
Tumor
-0.2
CPT0063320003
Tumor
-0.2
CPT0014160003
Tumor
-0.2
CPT0025580004
Tumor
-0.2
CPT0079180003
Tumor
-0.2
CPT0012280003
Tumor
-0.2
CPT0075130003
Tumor
-0.2
CPT0063630003
Tumor
-0.2
CPT0015810003
Tumor
-0.2
CPT0066470004
Tumor
-0.2
CPT0087040003
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0077310003
Tumor
-0.2
CPT0065430003
Tumor
-0.2
CPT0065930003
Tumor
-0.2
CPT0065690003
Tumor
-0.2
CPT0092160003
Tumor
-0.3
CPT0079410003
Tumor
-0.3
CPT0086360003
Tumor
-0.3
CPT0009000003
Tumor
-0.3
CPT0088690003
Tumor
-0.3
CPT0089020003
Tumor
-0.3
CPT0086870003
Tumor
-0.3
CPT0092290003
Tumor
-0.3
CPT0092790003
Tumor
-0.3
CPT0015730003
Tumor
-0.3
CPT0065810003
Tumor
-0.4
CPT0001260009
Tumor
-0.4
CPT0012370003
Tumor
-0.4
CPT0025050003
Tumor
-0.4
CPT0077110003
Tumor
-0.4
CPT0014370004
Tumor
-0.4
CPT0017850003
Tumor
-0.4
CPT0065750003
Tumor
-0.4
CPT0019990003
Tumor
-0.4
CPT0012550003
Tumor
-0.4
CPT0079380003
Tumor
-0.5
CPT0026410003
Tumor
-0.5
CPT0088480003
Tumor
-0.5
CPT0079230003
Tumor
-0.5
CPT0024670003
Tumor
-0.5
CPT0081880003
Tumor
-0.5
CPT0078830003
Tumor
-0.5
CPT0086820003
Tumor
-0.5
CPT0014450004
Tumor
-0.5
CPT0076330003
Tumor
-0.5
CPT0089460004
Tumor
-0.6
CPT0086950003
Tumor
-0.6
CPT0001180009
Tumor
-0.6
CPT0023350003
Tumor
-0.7
CPT0078660003
Tumor
-0.7
CPT0006440003
Tumor
-0.7
CPT0002350011
Tumor
-0.7
CPT0011410003
Tumor
-0.7
CPT0012180003
Tumor
-0.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
