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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
84.9
nTPM
GTEx:
84.9
nTPM
FANTOM5:
310.0
Scaled Tags Per Million
Pig:
76.6
nTPM
Mouse:
300.0
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
84.9
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 84.9
Samples: 105
Max nTPM: 261.2
Min nTPM: 2.3
Std nTPM: 59.4
Median nTPM:
351_1
91 years, male
261.2
353_1
82 years, female
257.1
356_1
87 years, female
249.4
452_1
88 years, female
248.6
354_1
81 years, female
228.1
352_1
62 years, male
226.8
163_1
78 years, male
187.7
218_1
71 years, female
183.2
506_1
65 years, male
171.9
319_1
81 years, male
171.5
350_1
84 years, female
155.5
177_1
74 years, male
153.7
264_1
73 years, female
149.6
394_1
75 years, female
143.5
349_1
83 years, male
142.6
292_1
71 years, male
141.0
321_1
62 years, female
140.5
320_1
89 years, female
134.6
386_1
76 years, male
133.3
503_1
68 years, male
131.7
406_1
79 years, male
129.7
425_1
59 years, female
125.8
317_1
60 years, male
124.9
480_1
63 years, male
123.9
322_1
76 years, male
119.0
173_1
67 years, male
117.5
243_1
75 years, male
116.7
377_1
82 years, female
115.0
318_1
68 years, male
113.4
189_1
76 years, male
113.1
384_1
83 years, male
109.3
295_1
61 years, female
109.1
335_1
73 years, female
105.7
376_1
75 years, female
104.1
447_1
81 years, male
104.0
355_1
70 years, female
103.4
286_1
68 years, female
102.0
379_1
60 years, male
101.5
41_1
94 years, female
94.3
291_1
76 years, male
91.0
405_1
91 years, male
86.9
237_1
82 years, male
86.0
172_1
72 years, female
85.9
404_1
82 years, female
85.5
251_1
78 years, male
85.2
293_1
68 years, female
84.8
389_1
86 years, female
81.8
316_1
62 years, male
77.2
311_1
78 years, male
76.4
348_1
84 years, male
75.3
254_1
77 years, female
74.8
4_1
88 years, female
74.6
265_1
87 years, male
74.2
517_1
88 years, male
74.2
229_1
69 years, female
70.7
17_1
71 years, male
67.9
396_1
62 years, male
67.5
288_1
66 years, female
67.4
375_1
74 years, female
64.2
314_1
67 years, male
63.6
99_1
64 years, male
63.4
266_1
85 years, male
61.2
526_1
61 years, male
60.0
137_1
83 years, male
58.9
518_1
75 years, female
57.8
468_1
89 years, male
56.7
6_1
73 years, female
56.3
308_1
70 years, female
55.1
347_1
72 years, male
55.0
2_1
77 years, female
54.7
217_1
76 years, male
54.1
307_1
66 years, female
51.7
145_1
84 years, male
50.3
246_1
77 years, male
46.7
35_1
74 years, female
44.4
120_1
70 years, female
43.3
115_1
83 years, male
43.2
153_1
70 years, female
41.0
315_1
62 years, female
38.7
9_1
66 years, female
38.5
324_1
76 years, male
36.7
499_1
55 years, female
35.7
126_1
63 years, male
33.5
109_1
81 years, female
33.4
18_1
88 years, male
30.4
139_1
64 years, female
28.0
313_1
79 years, female
27.3
42_1
85 years, male
26.7
142_1
61 years, female
26.7
81_1
67 years, male
26.4
117_1
61 years, male
25.5
495_1
57 years, female
25.3
501_1
88 years, male
22.3
89_1
63 years, male
20.0
162_1
79 years, female
19.3
119_1
70 years, female
19.2
43_1
64 years, female
17.0
32_1
67 years, male
16.2
414_1
84 years, female
15.6
466_1
57 years, female
11.0
415_1
77 years, female
9.0
149_1
88 years, male
8.8
413_1
59 years, female
7.5
491_1
89 years, female
2.7
490_1
67 years, female
2.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.