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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
1789.7
nTPM
HPA Brain:
1352.4
nTPM
GTEx:
1789.7
nTPM
FANTOM5:
1124.1
Scaled Tags Per Million
Pig:
1429.0
nTPM
Mouse:
855.6
nTPM
Allen mouse:
25.8
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1352.4
Sample id
Sample description
nTPM
Amygdala nTPM: 1352.4
2695
Female, age 67, right hemisphere
1646.3
2514
Male, age 75, right hemisphere
1517.4
1987
Female, age 91, left hemisphere
1313.6
2814
Male, age 76, right hemisphere
1159.4
2517
Female, age 94, left hemisphere
1125.4
Basal amygdala nTPM: 1069.3
2609
Male, age 75, right hemisphere
1724.3
2243
Female, age 91, right hemisphere
1291.7
1955
Male, age 76, both hemispheres
1057.6
2110
Male, age 80, left hemisphere
1033.5
2685
Female, age 94, left hemisphere
769.1
2827
Female, age 67, right hemisphere
539.7
Central amygdala nTPM: 1298.6
2515
Male, age 75, right hemisphere
1532.9
2701
Female, age 91, right hemisphere
1430.4
2826
Female, age 94, left hemisphere
1255.0
2239
Male, age 80, left hemisphere
1144.2
1905
Male, age 76, both hemispheres
1130.2
Corticomedial amygdala nTPM: 1021.3
2428
Male, age 75, right hemisphere
1438.3
2242
Female, age 91, right hemisphere
1281.9
2829
Male, age 80, left hemisphere
1047.9
2429
Female, age 94, left hemisphere
854.6
2240
Male, age 76, both hemispheres
790.7
2535
Female, age 67, right hemisphere
714.4
Lateral amygdala nTPM: 1144.4
2516
Male, age 75, right hemisphere
1532.3
2255
Female, age 91, right hemisphere
1415.1
2256
Male, age 80, left hemisphere
1293.7
2534
Female, age 94, left hemisphere
1037.2
1883
Male, age 76, both hemispheres
1022.1
2830
Female, age 67, right hemisphere
565.8
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1789.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 1789.7
Samples: 152
Max nTPM: 5381.2
Min nTPM: 155.0
Std nTPM: 879.3
Median nTPM: 1711.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
5381.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
4216.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
4212.5
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
3816.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
3498.8
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
3442.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
3411.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
3264.6
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
3259.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
3161.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
3144.1
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
3095.7
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
3041.1
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
2981.0
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
2975.5
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
2851.6
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
2841.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
2837.1
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
2825.7
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
2781.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
2755.9
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
2754.9
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
2713.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
2699.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
2690.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
2689.5
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
2565.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
2491.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
2490.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
2480.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
2462.6
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
2450.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
2423.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
2381.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
2336.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
2332.7
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
2310.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
2302.7
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
2297.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
2261.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
2258.8
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
2204.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
2191.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
2187.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
2183.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
2182.2
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
2177.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
2161.5
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
2159.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
2145.6
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
2118.3
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
2091.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
2090.9
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
2090.5
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
2054.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
2027.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
1943.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
1942.4
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
1931.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
1922.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
1889.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
1854.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
1854.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
1848.4
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
1846.2
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
1829.5
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
1811.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
1809.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
1790.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
1774.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
1773.8
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
1773.7
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
1756.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
1735.1
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
1729.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
1719.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
1704.5
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
1670.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
1668.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
1657.3
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
1638.5
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
1636.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
1589.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
1563.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
1559.9
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
1559.8
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
1514.3
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
1512.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
1511.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
1509.9
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
1504.7
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
1498.9
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
1489.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
1484.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
1475.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
1473.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
1457.3
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
1447.4
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
1435.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
1418.9
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
1411.8
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
1397.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
1391.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
1332.0
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
1330.1
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
1304.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
1299.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
1296.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
1277.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
1263.2
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
1239.6
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
1226.8
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
1184.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
1184.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
1181.4
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
1175.0
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
1163.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
1145.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
1133.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
1110.2
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
1105.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
1104.7
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
1057.0
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
1026.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
1021.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
983.3
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
981.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
965.9
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
941.3
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
908.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
830.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
815.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
787.2
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
780.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
745.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
687.8
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
673.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
665.3
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
625.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
620.7
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
597.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
509.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
502.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
483.8
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
473.5
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
460.1
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
453.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
441.8
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
326.5
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
264.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
214.6
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
155.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
855.6
Mouse sample
Sample description
nTPM
Amygdala nTPM: 855.6
Samples: 4
Max nTPM: 1032.3
Min nTPM: 754.7
Sample A
Male
843.0
Sample B
Male
754.7
Sample C
Female
1032.3
Sample D
Female
792.5
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.