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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NECTIN2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
92.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
267.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
232.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
211.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
203.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
169.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
163.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
156.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
153.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
150.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
147.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
138.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
120.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
119.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
118.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
115.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
115.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
114.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
114.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
114.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
104.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
102.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
100.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
96.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
95.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
95.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
95.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
92.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
91.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
91.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
85.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
84.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
82.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
79.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
76.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
74.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
74.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
72.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
72.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
69.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
65.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
64.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
62.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
62.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
61.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
61.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
58.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
58.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
58.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
55.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
54.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
53.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
50.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
49.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
47.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
46.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
45.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
42.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
42.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
36.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
35.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
34.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
31.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
30.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NECTIN2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
60.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
292.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
224.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
222.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
204.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
147.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
130.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
128.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
123.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
121.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
121.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
121.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
120.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
119.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
117.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
116.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
114.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
113.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
112.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
112.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
112.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
111.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
110.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
110.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
109.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
109.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
104.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
102.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
101.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
101.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
101.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
100.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
98.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
98.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
97.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
97.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
97.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
96.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
96.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
96.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
94.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
94.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
93.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
92.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
92.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
91.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
90.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
90.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
90.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
89.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
89.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
88.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
88.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
87.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
87.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
86.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
86.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
85.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
85.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
85.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
84.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
84.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
84.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
84.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
84.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
83.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
83.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
83.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
83.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
82.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
82.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
82.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
82.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
82.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
81.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
81.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
81.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
81.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
80.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
79.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
79.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
79.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
79.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
79.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
79.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
78.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
78.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
78.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
78.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
78.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
78.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
78.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
78.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
78.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
77.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
77.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
77.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
76.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
76.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
76.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
76.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
76.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
76.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
75.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
75.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
75.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
75.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
75.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
75.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
75.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
75.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
74.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
74.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
74.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
74.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
74.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
74.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
74.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
74.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
73.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
73.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
72.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
72.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
72.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
72.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
72.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
72.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
72.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
72.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
72.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
71.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
71.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
71.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
71.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
71.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
71.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
71.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
71.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
71.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
71.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
71.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
70.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
70.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
70.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
70.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
70.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
70.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
70.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
70.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
69.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
69.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
69.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
69.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
69.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
69.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
68.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
68.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
68.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
68.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
68.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
68.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
68.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
67.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
67.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
67.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
66.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
66.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
66.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
66.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
65.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
65.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
65.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
65.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
65.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
64.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
64.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
64.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
64.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
64.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
64.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
64.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
64.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
64.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
64.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
63.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
63.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
63.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
63.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
63.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
63.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
63.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
63.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
63.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
63.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
63.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
62.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
62.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
62.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
62.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
62.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
62.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
62.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
62.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
62.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
62.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
62.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
62.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
61.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
61.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
61.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
61.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
61.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
61.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
61.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
61.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
61.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
60.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
60.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
60.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
60.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
60.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
60.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
60.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
59.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
59.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
59.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
59.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
59.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
59.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
59.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
59.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
58.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
58.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
58.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
58.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
58.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
57.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
57.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
57.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
57.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
57.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
57.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
57.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
57.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
57.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
57.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
57.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
56.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
56.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
56.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
56.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
56.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
56.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
56.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
56.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
56.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
56.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
56.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
56.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
56.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
55.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
55.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
55.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
55.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
55.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
55.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
55.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
54.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
54.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
54.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
54.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
54.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
54.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
54.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
53.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
53.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
53.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
53.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
53.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
53.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
53.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
53.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
53.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
53.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
53.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
53.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
52.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
52.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
52.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
52.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
52.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
52.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
52.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
52.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
52.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
52.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
52.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
52.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
52.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
52.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
52.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
52.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
52.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
52.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
51.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
51.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
51.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
51.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
51.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
51.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
51.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
51.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
50.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
50.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
50.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
50.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
50.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
50.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
50.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
50.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
50.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
50.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
50.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
50.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
50.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
50.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
50.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
49.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
49.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
49.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
49.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
49.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
49.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
49.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
49.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
49.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
49.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
49.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
49.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
48.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
48.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
48.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
48.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
48.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
48.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
47.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
47.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
47.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
47.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
47.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
47.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
47.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
47.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
47.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
47.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
47.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
47.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
47.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
47.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
47.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
47.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
47.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
47.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
46.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
46.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
46.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
46.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
46.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
46.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
46.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
46.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
46.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
45.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
45.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
45.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
45.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
45.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
45.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
45.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
45.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
45.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
45.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
44.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
44.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
44.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
44.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
44.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
44.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
44.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
44.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
44.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
44.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
44.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
44.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
44.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
44.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
44.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
44.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
43.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
43.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
43.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
43.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
43.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
43.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
43.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
43.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
43.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
43.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
43.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
43.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
43.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
43.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
43.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
42.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
42.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
42.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
42.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
42.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
42.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
42.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
42.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
42.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
42.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
42.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
42.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
42.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
42.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
41.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
41.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
41.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
41.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
41.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
41.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
41.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
41.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
40.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
40.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
40.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
40.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
40.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
40.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
40.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
40.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
40.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
40.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
39.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
39.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
39.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
39.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
39.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
39.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
39.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
38.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
38.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
38.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
38.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
38.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
38.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
38.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
37.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
37.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
37.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
36.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
36.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
36.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
36.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
36.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
36.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
36.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
36.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
36.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
36.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
36.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
35.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
35.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
35.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
35.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
35.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
35.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
34.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
34.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
34.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
34.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
34.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
33.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
33.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
33.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
33.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
32.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
32.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
32.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
32.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
31.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
31.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
31.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
31.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
30.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
30.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
30.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
30.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
29.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
29.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
29.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
29.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
28.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
28.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
28.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
28.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
27.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
26.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
25.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
25.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
25.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
24.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
23.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
23.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
22.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
18.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
17.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
16.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
15.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NECTIN2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
57.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
153.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
117.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
117.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
109.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
107.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
100.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
92.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
90.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
89.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
84.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
83.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
80.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
79.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
77.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
74.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
73.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
72.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
71.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
69.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
68.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
67.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
67.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
66.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
66.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
65.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
65.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
63.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
62.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
62.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
62.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
62.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
62.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
62.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
62.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
60.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
60.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
59.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
59.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
58.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
57.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
57.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
55.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
55.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
54.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
54.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
53.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
53.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
52.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
52.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
51.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
51.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
51.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
51.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
51.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
50.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
50.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
50.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
50.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
50.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
50.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
50.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
49.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
49.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
48.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
48.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
47.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
46.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
46.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
46.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
46.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
45.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
44.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
44.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
44.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
44.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
42.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
41.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
41.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
41.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
40.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
40.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
40.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
40.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
38.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
38.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
38.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
37.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
37.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
37.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
36.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
36.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
36.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
34.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
32.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
31.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
31.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
30.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
29.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
28.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NECTIN2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
107.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
359.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
321.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
315.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
306.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
299.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
298.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
281.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
268.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
263.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
255.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
247.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
231.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
222.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
216.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
211.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
210.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
209.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
200.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
199.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
194.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
190.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
184.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
183.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
177.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
176.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
174.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
172.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
169.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
169.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
168.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
168.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
166.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
165.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
164.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
164.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
163.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
161.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
159.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
157.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
156.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
155.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
155.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
154.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
153.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
152.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
148.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
147.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
146.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
145.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
144.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
144.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
144.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
141.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
141.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
139.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
138.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
134.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
134.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
133.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
133.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
132.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
132.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
131.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
130.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
130.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
130.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
129.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
129.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
128.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
127.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
127.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
126.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
126.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
126.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
126.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
125.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
125.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
125.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
125.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
124.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
123.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
123.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
122.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
122.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
122.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
120.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
120.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
119.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
119.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
119.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
118.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
118.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
118.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
118.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
117.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
116.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
116.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
116.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
116.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
116.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
116.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
115.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
114.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
113.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
113.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
113.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
112.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
111.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
110.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
110.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
109.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
108.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
108.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
108.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
107.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
106.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
105.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
105.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
105.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
105.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
104.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
104.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
103.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
102.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
102.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
102.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
102.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
102.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
101.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
100.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
100.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
100.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
99.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
99.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
98.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
98.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
98.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
98.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
97.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
97.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
97.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
96.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
95.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
95.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
95.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
95.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
94.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
93.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
93.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
93.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
93.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
93.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
93.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
92.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
92.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
92.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
91.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
90.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
90.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
90.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
90.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
90.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
90.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
89.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
89.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
88.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
88.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
88.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
87.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
87.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
87.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
86.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
86.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
85.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
85.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
85.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
85.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
85.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
84.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
84.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
83.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
83.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
83.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
83.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
82.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
82.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
82.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
82.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
82.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
81.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
80.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
80.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
80.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
80.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
79.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
78.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
78.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
78.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
78.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
78.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
76.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
76.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
76.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
76.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
75.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
74.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
74.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
74.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
73.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
73.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
72.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
71.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
70.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
70.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
70.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
70.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
70.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
70.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
70.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
69.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
68.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
68.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
68.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
66.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
66.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
66.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
66.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
65.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
65.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
65.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
64.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
64.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
62.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
62.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
62.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
61.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
60.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
60.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
59.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
59.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
58.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
58.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
57.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
56.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
56.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
55.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
53.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
53.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
53.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
51.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
49.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
49.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
49.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
49.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
48.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
48.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
47.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
47.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
47.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
46.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
46.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
46.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
45.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
45.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
44.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
43.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
43.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
42.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
40.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
39.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
38.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
38.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
36.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
36.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
34.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
34.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
33.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
33.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
30.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
30.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
27.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
26.2
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0081880003
Tumor
0.6
CPT0069160003
Tumor
0.6
CPT0089020003
Tumor
0.5
CPT0011410003
Tumor
0.5
CPT0001180009
Tumor
0.5
CPT0084560003
Tumor
0.5
CPT0065450001
Normal
0.5
CPT0000790001
Normal
0.4
CPT0012550003
Tumor
0.4
CPT0087040003
Tumor
0.4
CPT0092730003
Tumor
0.4
CPT0010160003
Tumor
0.3
CPT0078660003
Tumor
0.3
CPT0021240003
Tumor
0.3
CPT0010170001
Normal
0.3
CPT0079480003
Tumor
0.3
CPT0001220008
Tumor
0.3
CPT0092800003
Normal
0.3
CPT0001190001
Normal
0.3
CPT0025060001
Normal
0.3
CPT0077310003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0077320001
Normal
0.2
CPT0025170003
Tumor
0.2
CPT0020020001
Normal
0.2
CPT0006900003
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0023350003
Tumor
0.2
CPT0082010001
Normal
0.2
CPT0001510001
Normal
0.2
CPT0077140001
Normal
0.2
CPT0092310003
Normal
0.2
CPT0088970003
Tumor
0.2
CPT0086970003
Normal
0.2
CPT0089040001
Normal
0.2
CPT0006950001
Normal
0.2
CPT0088690003
Tumor
0.2
CPT0000640003
Tumor
0.2
CPT0001350001
Normal
0.2
CPT0089480003
Normal
0.2
CPT0017450001
Normal
0.2
CPT0088760003
Tumor
0.2
CPT0077500001
Normal
0.2
CPT0014350001
Normal
0.2
CPT0088710001
Normal
0.2
CPT0012290003
Normal
0.2
CPT0087050003
Normal
0.2
CPT0025290003
Tumor
0.2
CPT0014130001
Normal
0.2
CPT0088640003
Normal
0.2
CPT0065820001
Normal
0.2
CPT0078510003
Tumor
0.2
CPT0026420001
Normal
0.2
CPT0025350003
Tumor
0.2
CPT0017850003
Tumor
0.2
CPT0075170001
Normal
0.2
CPT0023360001
Normal
0.1
CPT0069010001
Normal
0.1
CPT0066430001
Normal
0.1
CPT0084590001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0012640003
Normal
0.1
CPT0071150004
Tumor
0.1
CPT0001230001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0000890001
Normal
0.1
CPT0063320003
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0088920001
Normal
0.1
CPT0012770003
Normal
0.1
CPT0023710001
Normal
0.1
CPT0076330003
Tumor
0.1
CPT0000660001
Normal
0.1
CPT0012090003
Normal
0.1
CPT0066520001
Normal
0.1
CPT0092190003
Normal
0.1
CPT0081620001
Normal
0.1
CPT0001340003
Tumor
0.1
CPT0006440003
Tumor
0.1
CPT0063640001
Normal
0.1
CPT0079000001
Normal
0.1
CPT0019990003
Tumor
0.1
CPT0001550001
Normal
0.1
CPT0006630003
Tumor
0.1
CPT0009000003
Tumor
0.1
CPT0063630003
Tumor
0.1
CPT0078840001
Normal
0.1
CPT0088480003
Tumor
0.1
CPT0001270001
Normal
0.0
CPT0092290003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0006730001
Normal
0.0
CPT0088630003
Tumor
0.0
CPT0066470004
Tumor
0.0
CPT0025610001
Normal
0.0
CPT0012180003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0079180003
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0092740003
Normal
0.0
CPT0019160001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0065870003
Tumor
0.0
CPT0075130003
Tumor
0.0
CPT0079510001
Normal
0.0
CPT0000870016
Tumor
0.0
CPT0025050003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0012570003
Normal
0.0
CPT0001260009
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0079300001
Normal
0.0
CPT0014450004
Tumor
0.0
CPT0025580004
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0065430003
Tumor
0.0
CPT0089460004
Tumor
-0.1
CPT0078930003
Tumor
-0.1
CPT0007320003
Tumor
-0.1
CPT0069000003
Tumor
-0.1
CPT0024680001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0092160003
Tumor
-0.1
CPT0086890003
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0078800003
Tumor
-0.1
CPT0086360003
Tumor
-0.1
CPT0012280003
Tumor
-0.1
CPT0075570001
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0088900003
Tumor
-0.1
CPT0065750003
Tumor
-0.1
CPT0078990003
Tumor
-0.1
CPT0020120003
Tumor
-0.1
CPT0014370004
Tumor
-0.1
CPT0010110003
Tumor
-0.1
CPT0079380003
Tumor
-0.1
CPT0063330001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0078530001
Normal
-0.1
CPT0025230003
Tumor
-0.1
CPT0078940001
Normal
-0.1
CPT0019130003
Tumor
-0.1
CPT0010120001
Normal
-0.1
CPT0024670003
Tumor
-0.1
CPT0065930003
Tumor
-0.1
CPT0002270011
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0065810003
Tumor
-0.2
CPT0079270003
Tumor
-0.2
CPT0012080003
Tumor
-0.2
CPT0092790003
Tumor
-0.2
CPT0000780007
Tumor
-0.2
CPT0009020003
Normal
-0.2
CPT0007870001
Normal
-0.2
CPT0078670001
Normal
-0.2
CPT0075560003
Tumor
-0.2
CPT0012670003
Tumor
-0.2
CPT0064400001
Normal
-0.2
CPT0086870003
Tumor
-0.2
CPT0012370003
Tumor
-0.2
CPT0081990003
Tumor
-0.2
CPT0012920003
Normal
-0.2
CPT0085670003
Tumor
-0.2
CPT0081600003
Tumor
-0.2
CPT0001500009
Tumor
-0.2
CPT0002350011
Tumor
-0.2
CPT0064370003
Tumor
-0.2
CPT0009060003
Tumor
-0.2
CPT0086030003
Tumor
-0.3
CPT0009080003
Normal
-0.3
CPT0066480003
Tumor
-0.3
CPT0025110003
Tumor
-0.3
CPT0026410003
Tumor
-0.3
CPT0002370001
Normal
-0.3
CPT0025880003
Tumor
-0.3
CPT0086950003
Tumor
-0.3
CPT0001540009
Tumor
-0.3
CPT0014470001
Normal
-0.3
CPT0017410003
Tumor
-0.4
CPT0015730003
Tumor
-0.4
CPT0007860003
Tumor
-0.4
CPT0086820003
Tumor
-0.4
CPT0012900004
Tumor
-0.5
CPT0011240003
Tumor
-0.6
CPT0077110003
Tumor
-0.6
CPT0088550004
Tumor
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
