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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PRKCSH is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
178.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
383.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
372.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
329.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
316.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
302.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
284.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
276.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
275.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
246.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
246.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
240.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
238.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
226.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
219.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
213.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
207.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
206.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
205.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
204.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
199.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
197.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
193.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
190.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
189.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
185.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
184.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
178.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
177.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
177.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
174.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
171.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
169.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
162.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
162.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
159.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
152.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
151.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
151.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
150.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
149.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
148.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
148.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
147.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
146.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
145.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
144.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
138.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
132.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
128.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
128.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
128.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
124.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
116.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
108.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
106.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
104.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
99.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
94.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
89.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
88.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
85.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
81.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
80.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PRKCSH is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
179.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
374.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
353.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
339.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
329.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
322.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
319.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
311.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
305.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
297.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
297.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
295.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
293.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
291.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
291.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
289.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
286.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
284.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
280.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
277.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
277.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
276.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
276.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
276.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
276.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
271.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
271.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
270.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
269.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
269.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
269.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
266.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
266.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
265.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
265.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
264.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
264.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
262.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
262.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
262.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
261.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
260.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
260.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
259.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
259.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
257.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
256.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
255.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
255.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
255.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
254.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
254.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
253.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
253.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
253.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
250.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
250.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
250.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
250.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
248.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
246.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
246.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
246.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
246.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
246.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
245.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
245.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
244.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
242.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
241.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
241.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
240.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
240.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
240.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
239.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
238.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
238.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
237.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
236.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
235.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
235.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
233.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
232.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
232.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
232.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
232.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
232.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
231.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
230.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
230.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
230.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
228.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
228.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
228.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
227.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
227.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
226.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
225.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
225.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
225.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
225.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
224.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
224.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
223.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
222.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
222.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
220.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
219.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
219.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
218.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
218.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
218.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
217.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
217.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
217.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
215.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
215.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
213.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
213.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
212.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
212.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
212.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
212.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
211.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
210.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
210.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
210.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
210.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
210.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
209.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
209.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
208.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
208.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
207.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
207.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
207.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
207.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
206.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
206.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
205.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
205.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
204.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
203.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
203.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
203.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
203.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
203.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
202.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
202.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
202.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
202.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
202.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
202.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
201.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
201.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
201.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
201.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
201.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
200.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
200.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
200.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
200.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
200.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
200.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
199.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
199.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
199.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
198.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
198.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
198.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
198.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
197.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
197.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
196.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
196.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
196.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
196.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
196.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
195.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
195.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
195.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
195.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
195.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
195.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
195.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
195.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
195.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
195.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
195.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
195.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
194.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
194.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
193.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
193.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
192.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
192.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
191.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
191.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
191.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
191.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
191.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
191.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
190.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
190.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
190.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
190.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
189.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
189.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
189.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
189.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
189.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
188.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
188.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
187.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
187.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
187.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
187.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
186.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
186.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
186.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
186.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
185.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
185.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
185.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
184.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
184.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
184.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
184.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
184.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
183.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
183.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
183.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
183.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
183.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
182.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
182.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
182.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
182.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
182.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
181.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
181.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
181.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
181.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
180.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
180.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
180.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
180.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
180.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
180.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
180.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
179.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
179.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
179.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
179.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
177.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
177.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
177.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
177.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
176.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
176.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
176.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
176.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
176.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
175.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
175.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
175.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
174.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
174.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
173.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
173.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
173.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
173.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
173.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
173.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
172.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
172.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
172.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
172.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
171.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
171.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
171.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
171.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
170.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
170.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
170.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
169.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
169.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
169.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
169.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
169.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
169.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
169.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
168.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
168.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
168.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
168.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
168.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
168.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
167.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
167.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
167.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
167.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
167.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
167.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
166.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
166.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
166.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
166.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
165.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
165.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
165.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
165.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
164.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
164.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
164.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
164.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
163.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
163.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
163.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
163.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
162.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
162.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
162.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
162.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
162.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
162.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
161.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
161.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
161.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
160.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
160.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
160.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
159.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
159.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
159.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
159.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
158.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
158.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
158.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
158.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
158.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
158.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
157.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
157.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
157.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
157.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
156.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
156.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
155.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
155.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
155.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
155.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
155.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
155.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
155.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
155.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
154.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
154.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
154.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
154.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
153.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
153.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
153.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
153.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
153.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
152.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
152.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
152.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
152.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
152.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
152.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
152.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
152.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
152.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
152.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
151.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
151.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
151.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
151.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
150.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
149.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
149.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
148.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
148.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
148.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
147.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
147.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
146.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
146.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
146.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
145.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
145.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
145.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
145.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
144.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
144.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
144.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
144.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
144.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
144.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
144.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
144.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
144.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
143.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
143.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
142.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
142.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
141.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
141.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
141.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
141.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
140.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
140.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
140.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
139.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
139.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
139.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
138.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
138.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
138.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
137.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
137.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
137.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
136.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
136.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
136.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
135.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
134.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
134.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
134.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
134.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
133.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
133.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
133.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
133.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
132.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
132.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
131.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
130.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
130.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
130.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
130.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
129.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
128.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
128.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
128.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
127.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
126.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
124.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
124.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
124.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
124.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
124.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
123.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
123.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
123.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
123.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
122.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
121.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
120.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
120.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
120.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
119.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
119.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
119.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
118.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
118.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
117.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
116.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
115.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
115.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
113.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
113.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
113.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
112.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
110.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
109.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
108.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
108.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
107.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
107.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
107.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
107.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
106.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
105.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
105.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
104.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
103.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
103.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
103.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
100.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
99.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
98.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
98.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
97.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
97.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
91.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
90.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
86.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
85.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
83.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
82.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
81.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
81.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
78.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
72.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
68.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
67.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
67.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
65.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
61.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
60.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
58.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
54.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
50.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
45.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
42.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
37.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
37.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
33.1
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
31.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PRKCSH is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
186.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
332.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
326.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
321.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
318.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
291.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
281.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
278.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
271.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
269.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
260.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
249.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
249.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
247.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
246.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
246.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
242.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
239.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
235.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
229.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
226.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
224.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
218.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
218.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
213.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
212.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
212.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
207.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
206.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
204.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
202.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
202.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
202.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
199.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
199.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
198.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
196.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
195.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
193.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
193.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
190.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
188.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
188.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
187.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
186.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
186.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
186.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
185.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
183.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
182.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
182.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
181.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
180.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
178.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
174.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
173.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
172.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
170.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
169.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
168.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
167.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
166.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
164.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
164.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
162.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
161.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
161.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
159.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
159.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
158.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
158.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
158.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
155.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
155.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
153.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
153.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
153.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
151.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
151.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
148.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
148.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
144.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
144.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
142.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
136.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
135.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
134.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
132.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
131.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
131.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
129.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
128.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
128.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
123.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
115.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
115.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
111.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
105.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
104.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
97.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PRKCSH is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
187.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
508.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
432.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
402.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
397.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
389.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
360.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
351.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
348.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
341.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
335.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
332.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
331.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
326.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
318.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
313.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
311.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
307.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
297.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
297.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
297.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
287.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
287.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
285.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
281.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
280.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
279.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
277.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
274.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
273.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
269.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
269.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
269.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
269.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
263.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
261.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
261.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
260.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
260.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
260.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
259.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
258.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
257.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
257.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
257.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
257.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
256.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
255.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
255.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
254.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
253.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
252.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
252.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
251.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
249.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
247.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
245.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
244.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
244.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
242.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
242.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
241.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
240.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
239.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
238.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
236.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
236.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
235.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
233.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
232.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
232.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
231.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
229.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
229.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
229.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
228.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
228.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
227.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
226.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
226.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
224.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
223.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
222.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
221.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
220.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
219.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
219.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
216.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
216.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
215.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
211.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
210.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
209.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
208.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
208.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
205.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
205.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
205.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
204.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
204.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
203.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
202.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
202.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
201.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
199.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
197.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
197.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
196.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
196.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
196.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
195.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
195.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
195.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
195.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
194.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
194.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
193.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
193.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
193.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
193.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
192.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
192.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
191.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
191.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
191.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
190.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
190.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
187.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
187.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
187.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
187.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
186.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
185.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
185.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
185.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
185.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
184.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
184.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
183.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
182.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
181.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
181.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
181.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
181.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
181.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
180.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
179.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
178.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
178.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
177.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
177.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
177.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
177.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
174.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
174.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
173.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
173.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
172.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
171.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
170.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
170.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
170.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
168.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
168.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
167.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
165.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
165.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
165.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
164.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
164.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
163.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
161.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
160.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
160.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
160.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
160.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
159.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
159.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
159.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
159.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
158.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
157.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
157.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
157.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
156.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
155.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
154.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
153.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
153.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
152.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
151.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
151.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
150.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
150.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
149.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
149.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
149.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
148.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
148.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
147.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
146.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
146.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
146.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
145.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
143.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
142.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
142.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
141.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
141.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
140.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
140.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
139.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
138.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
138.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
137.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
136.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
135.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
135.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
135.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
134.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
134.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
132.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
131.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
131.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
131.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
130.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
130.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
130.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
129.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
129.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
128.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
128.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
128.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
127.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
127.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
126.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
126.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
122.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
122.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
121.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
121.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
120.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
116.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
116.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
115.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
113.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
112.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
111.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
110.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
110.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
108.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
106.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
105.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
104.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
103.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
103.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
102.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
101.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
100.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
99.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
98.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
96.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
91.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
90.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
89.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
88.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
87.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
87.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
82.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
73.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
70.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
69.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
67.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
66.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
65.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
62.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
62.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
58.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
57.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
50.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
48.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
40.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
7.9
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0002350011
Tumor
1.6
CPT0025110003
Tumor
1.5
CPT0079270003
Tumor
1.3
CPT0001340003
Tumor
1.2
CPT0086950003
Tumor
0.9
CPT0076330003
Tumor
0.9
CPT0088550004
Tumor
0.6
CPT0023350003
Tumor
0.5
CPT0069160003
Tumor
0.5
CPT0081880003
Tumor
0.5
CPT0077110003
Tumor
0.4
CPT0014450004
Tumor
0.4
CPT0012900004
Tumor
0.4
CPT0010110003
Tumor
0.4
CPT0084560003
Tumor
0.4
CPT0009000003
Tumor
0.4
CPT0011410003
Tumor
0.4
CPT0001260009
Tumor
0.4
CPT0075130003
Tumor
0.3
CPT0012280003
Tumor
0.3
CPT0088690003
Tumor
0.3
CPT0017410003
Tumor
0.3
CPT0071150004
Tumor
0.3
CPT0079480003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0001180009
Tumor
0.3
CPT0017850003
Tumor
0.3
CPT0065430003
Tumor
0.3
CPT0063630003
Tumor
0.3
CPT0085670003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0069000003
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0089020003
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0065930003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0001220008
Tumor
0.1
CPT0012180003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0065810003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0009060003
Tumor
0.1
CPT0010160003
Tumor
0.1
CPT0024680001
Normal
0.1
CPT0064370003
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0000640003
Tumor
0.1
CPT0000780007
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0088900003
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0078990003
Tumor
0.1
CPT0088630003
Tumor
0.1
CPT0000890001
Normal
0.1
CPT0081990003
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0065690003
Tumor
0.0
CPT0012080003
Tumor
0.0
CPT0092730003
Tumor
0.0
CPT0077320001
Normal
0.0
CPT0081600003
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0077310003
Tumor
0.0
CPT0077490003
Tumor
0.0
CPT0012550003
Tumor
0.0
CPT0086360003
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0014370004
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0079380003
Tumor
0.0
CPT0086870003
Tumor
0.0
CPT0084590001
Normal
0.0
CPT0011240003
Tumor
0.0
CPT0079410003
Tumor
0.0
CPT0075720003
Tumor
0.0
CPT0007320003
Tumor
0.0
CPT0088760003
Tumor
0.0
CPT0001270001
Normal
0.0
CPT0006900003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0078530001
Normal
0.0
CPT0078510003
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0092160003
Tumor
0.0
CPT0014470001
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0066430001
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0092190003
Normal
-0.1
CPT0088480003
Tumor
-0.1
CPT0089480003
Normal
-0.1
CPT0079230003
Tumor
-0.1
CPT0089460004
Tumor
-0.1
CPT0078930003
Tumor
-0.1
CPT0092800003
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0002270011
Tumor
-0.1
CPT0012290003
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0078800003
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0026420001
Normal
-0.1
CPT0065870003
Tumor
-0.1
CPT0082010001
Normal
-0.1
CPT0025050003
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0092740003
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0092310003
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0018250001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0065450001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0086830003
Normal
-0.2
CPT0020120003
Tumor
-0.2
CPT0063640001
Normal
-0.2
CPT0064400001
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0021240003
Tumor
-0.2
CPT0014160003
Tumor
-0.2
CPT0078670001
Normal
-0.2
CPT0013790003
Normal
-0.2
CPT0025290003
Tumor
-0.2
CPT0065820001
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0020020001
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0079510001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0025170003
Tumor
-0.2
CPT0069190001
Normal
-0.2
CPT0006730001
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0076350001
Normal
-0.2
CPT0001190001
Normal
-0.2
CPT0079000001
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0012920003
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0001350001
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0092790003
Tumor
-0.2
CPT0009080003
Normal
-0.2
CPT0079430001
Normal
-0.2
CPT0086370003
Normal
-0.2
CPT0007860003
Tumor
-0.2
CPT0079300001
Normal
-0.2
CPT0012570003
Normal
-0.2
CPT0012770003
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0000790001
Normal
-0.2
CPT0012640003
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0006630003
Tumor
-0.2
CPT0063330001
Normal
-0.3
CPT0078660003
Tumor
-0.3
CPT0019160001
Normal
-0.3
CPT0075560003
Tumor
-0.3
CPT0092290003
Tumor
-0.3
CPT0009020003
Normal
-0.3
CPT0019990003
Tumor
-0.3
CPT0002370001
Normal
-0.3
CPT0001550001
Normal
-0.3
CPT0001230001
Normal
-0.3
CPT0065750003
Tumor
-0.3
CPT0066470004
Tumor
-0.3
CPT0079180003
Tumor
-0.3
CPT0025920001
Normal
-0.3
CPT0086890003
Normal
-0.4
CPT0007870001
Normal
-0.4
CPT0086030003
Tumor
-0.4
CPT0088970003
Tumor
-0.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
