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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS4Y1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
283.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
271.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
247.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
229.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
192.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
181.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
179.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
177.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
148.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
131.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
126.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
112.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
105.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
102.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
88.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
73.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
66.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
52.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
34.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
34.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
27.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
23.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
20.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
17.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
13.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
11.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
8.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
8.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
7.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
7.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
7.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
7.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
4.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
3.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
0.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
0.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
0.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
0.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
0.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS4Y1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
163.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
1410.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
1128.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
981.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
893.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
800.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
714.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
671.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
652.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
650.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
643.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
616.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
611.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
608.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
599.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
599.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
588.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
578.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
573.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
569.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
560.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
550.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
550.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
546.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
544.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
527.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
516.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
514.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
510.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
510.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
506.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
497.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
495.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
494.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
493.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
491.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
489.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
484.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
482.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
482.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
474.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
471.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
471.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
467.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
467.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
467.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
467.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
463.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
455.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
454.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
452.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
448.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
447.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
447.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
443.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
441.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
441.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
441.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
440.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
439.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
437.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
434.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
432.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
430.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
426.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
424.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
420.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
417.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
415.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
415.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
414.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
414.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
407.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
407.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
406.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
404.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
403.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
403.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
401.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
399.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
398.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
397.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
396.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
395.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
394.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
393.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
392.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
390.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
388.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
386.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
386.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
383.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
382.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
381.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
380.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
379.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
378.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
377.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
376.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
373.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
373.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
370.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
366.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
366.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
363.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
361.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
360.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
358.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
356.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
354.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
353.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
352.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
351.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
349.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
349.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
346.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
343.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
340.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
339.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
334.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
333.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
333.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
333.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
324.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
322.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
315.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
315.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
314.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
313.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
313.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
310.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
308.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
307.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
304.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
301.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
294.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
289.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
288.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
286.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
284.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
283.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
280.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
279.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
278.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
278.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
276.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
275.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
275.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
266.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
265.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
265.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
264.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
263.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
261.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
260.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
257.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
254.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
252.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
249.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
247.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
241.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
240.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
239.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
234.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
233.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
230.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
225.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
221.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
220.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
219.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
216.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
215.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
214.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
214.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
213.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
211.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
209.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
200.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
194.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
191.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
180.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
179.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
178.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
177.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
173.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
170.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
170.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
169.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
166.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
159.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
154.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
150.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
146.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
145.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
141.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
141.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
139.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
138.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
138.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
136.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
133.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
131.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
130.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
127.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
127.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
127.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
126.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
124.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
118.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
112.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
110.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
110.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
109.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
106.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
105.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
104.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
103.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
103.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
103.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
103.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
103.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
102.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
102.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
102.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
102.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
101.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
100.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
99.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
99.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
98.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
97.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
97.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
94.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
93.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
92.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
92.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
90.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
90.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
90.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
87.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
87.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
86.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
85.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
84.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
84.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
84.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
83.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
82.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
81.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
81.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
81.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
80.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
80.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
79.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
79.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
78.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
78.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
77.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
75.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
75.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
74.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
74.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
74.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
73.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
72.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
71.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
71.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
70.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
70.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
69.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
69.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
68.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
67.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
66.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
66.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
66.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
65.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
65.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
65.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
63.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
63.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
63.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
62.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
62.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
61.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
60.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
60.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
60.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
60.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
59.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
58.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
56.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
56.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
56.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
53.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
53.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
53.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
52.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
51.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
51.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
51.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
50.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
50.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
50.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
49.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
49.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
48.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
48.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
47.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
44.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
43.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
43.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
41.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
40.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
40.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
39.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
39.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
36.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
34.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
33.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
32.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
32.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
32.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
30.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
28.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
28.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
27.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
27.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
27.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
26.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
26.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
24.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
24.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
23.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
23.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
19.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
17.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
17.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
17.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
17.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
15.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
14.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
14.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
14.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
13.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
12.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
8.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
8.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
5.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
3.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
3.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
2.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
1.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
1.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
1.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
1.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
1.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
1.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
1.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
0.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
0.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
0.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
0.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
0.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
0.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
0.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
0.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
0.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
0.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
0.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
0.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
0.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
0.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
0.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
0.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
0.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
0.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
0.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
0.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
0.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
0.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
0.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
0.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
0.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
0.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
0.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
0.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
0.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
0.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
0.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
0.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
0.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
0.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
0.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
0.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
0.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
0.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
0.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
0.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
0.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
0.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
0.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
0.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
0.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
0.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
0.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
0.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
0.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
0.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
0.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
0.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
0.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
0.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
0.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
0.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
0.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
0.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
0.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
0.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
0.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
0.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
0.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
0.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
0.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
0.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
0.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
0.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
0.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
0.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
0.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
0.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
0.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
0.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
0.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
0.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
0.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
0.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
0.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
0.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
0.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
0.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
0.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
0.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
0.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
0.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
0.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
0.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
0.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
0.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
0.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
0.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
0.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
0.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
0.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
0.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
0.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
0.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
0.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
0.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
0.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
0.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
0.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
0.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
0.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
0.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
0.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
0.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
0.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
0.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
0.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
0.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
0.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
0.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
0.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
0.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
0.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
0.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
0.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
0.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
0.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
0.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
0.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
0.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
0.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
0.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
0.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
0.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
0.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
0.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
0.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
0.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
0.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
0.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
0.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
0.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
0.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
0.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
0.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
0.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
0.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
0.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
0.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
0.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
0.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
0.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
0.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
0.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
0.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
0.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
0.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
0.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
0.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
0.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
0.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
0.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
0.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
0.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
0.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
0.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
0.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS4Y1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
187.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
684.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
629.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
538.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
534.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
528.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
510.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
485.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
474.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
470.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
466.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
437.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
428.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
428.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
419.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
394.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
391.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
383.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
375.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
375.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
366.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
365.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
351.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
350.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
347.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
346.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
337.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
336.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
334.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
331.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
329.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
323.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
319.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
305.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
291.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
283.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
279.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
276.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
263.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
258.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
248.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
226.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
217.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
209.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
201.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
184.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
164.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
159.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
141.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
110.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
105.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
82.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
80.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
74.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
71.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
70.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
69.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
65.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
64.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
63.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
63.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
61.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
60.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
59.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
56.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
56.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
53.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
50.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
49.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
46.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
43.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
40.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
38.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
38.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
24.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
21.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
16.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
14.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
1.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
0.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
0.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
0.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
0.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
0.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
0.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
0.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
0.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
0.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
0.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
0.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
0.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
0.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
0.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
0.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
0.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
0.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
0.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
0.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
0.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
0.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS4Y1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
57.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
671.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
603.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
572.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
521.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
512.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
494.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
458.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
433.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
429.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
412.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
406.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
385.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
339.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
334.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
315.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
314.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
298.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
281.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
274.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
259.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
256.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
233.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
225.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
218.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
209.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
200.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
194.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
194.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
189.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
184.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
176.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
174.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
170.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
167.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
158.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
151.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
148.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
144.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
110.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
108.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
107.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
106.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
91.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
86.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
82.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
77.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
75.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
74.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
74.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
68.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
65.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
62.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
61.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
60.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
59.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
58.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
56.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
55.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
55.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
54.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
54.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
52.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
49.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
49.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
47.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
47.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
46.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
46.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
45.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
44.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
41.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
40.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
39.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
39.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
39.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
38.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
38.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
37.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
37.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
37.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
37.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
37.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
37.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
37.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
36.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
35.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
34.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
34.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
32.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
31.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
31.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
29.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
29.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
28.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
28.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
27.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
27.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
27.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
27.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
26.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
26.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
25.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
25.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
25.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
25.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
25.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
25.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
24.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
24.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
24.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
24.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
24.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
23.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
22.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
21.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
21.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
21.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
20.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
19.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
19.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
19.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
19.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
18.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
18.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
18.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
18.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
18.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
18.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
17.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
17.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
17.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
17.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
17.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
17.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
16.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
16.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
15.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
15.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
15.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
15.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
15.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
15.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
15.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
15.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
14.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
14.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
14.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
14.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
14.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
13.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
12.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
12.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
12.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
12.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
12.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
12.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
11.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
11.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
11.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
10.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
10.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
10.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
9.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
9.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
9.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
9.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
9.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
8.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
8.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
8.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
7.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
7.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
7.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
6.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
6.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
6.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
6.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
6.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
6.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
6.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
5.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
5.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
5.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
5.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
5.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
5.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
5.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
4.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
4.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
4.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
4.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
3.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
3.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
3.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
2.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
1.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
1.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
1.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
0.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
0.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
0.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
0.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
0.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
0.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
0.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
0.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
0.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
0.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
0.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
0.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
0.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
0.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
0.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
0.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
0.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
0.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
0.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
0.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
0.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
0.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
0.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
0.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
0.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
0.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
0.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
0.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
0.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
0.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
0.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
0.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
0.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
0.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
0.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
0.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
0.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
0.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
0.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
0.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
0.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
0.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
0.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
0.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
0.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
0.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
0.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
0.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
0.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
0.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
0.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
0.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0025880003
Tumor
0.7
CPT0078800003
Tumor
0.7
CPT0088480003
Tumor
0.7
CPT0088970003
Tumor
0.7
CPT0001180009
Tumor
0.7
CPT0088550004
Tumor
0.6
CPT0012180003
Tumor
0.6
CPT0002350011
Tumor
0.6
CPT0007320003
Tumor
0.5
CPT0017410003
Tumor
0.5
CPT0012080003
Tumor
0.5
CPT0015810003
Tumor
0.5
CPT0077320001
Normal
0.5
CPT0065430003
Tumor
0.5
CPT0010110003
Tumor
0.5
CPT0017850003
Tumor
0.5
CPT0086820003
Tumor
0.5
CPT0023350003
Tumor
0.4
CPT0025050003
Tumor
0.4
CPT0092730003
Tumor
0.4
CPT0012670003
Tumor
0.4
CPT0001270001
Normal
0.4
CPT0017450001
Normal
0.3
CPT0001190001
Normal
0.3
CPT0089480003
Normal
0.3
CPT0076350001
Normal
0.3
CPT0086890003
Normal
0.3
CPT0075720003
Tumor
0.3
CPT0075570001
Normal
0.3
CPT0000660001
Normal
0.3
CPT0019990003
Tumor
0.3
CPT0075560003
Tumor
0.3
CPT0092310003
Normal
0.2
CPT0065870003
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0025060001
Normal
0.2
CPT0012370003
Tumor
0.2
CPT0069000003
Tumor
0.2
CPT0086870003
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0007470001
Normal
0.2
CPT0092740003
Normal
0.2
CPT0088780001
Normal
0.2
CPT0025290003
Tumor
0.2
CPT0086830003
Normal
0.2
CPT0089040001
Normal
0.2
CPT0088760003
Tumor
0.2
CPT0013790003
Normal
0.2
CPT0069190001
Normal
0.2
CPT0088640003
Normal
0.2
CPT0001260009
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0024680001
Normal
0.2
CPT0010120001
Normal
0.1
CPT0077140001
Normal
0.1
CPT0065450001
Normal
0.1
CPT0023360001
Normal
0.1
CPT0078830003
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0069010001
Normal
0.1
CPT0092800003
Normal
0.1
CPT0000890001
Normal
0.1
CPT0078840001
Normal
0.1
CPT0078940001
Normal
0.1
CPT0023710001
Normal
0.1
CPT0088570001
Normal
0.1
CPT0088920001
Normal
0.1
CPT0079410003
Tumor
0.1
CPT0010170001
Normal
0.1
CPT0089020003
Tumor
0.1
CPT0076330003
Tumor
0.1
CPT0025610001
Normal
0.1
CPT0077490003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0078930003
Tumor
0.1
CPT0010160003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0081880003
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0065750003
Tumor
0.1
CPT0064400001
Normal
0.1
CPT0025920001
Normal
0.1
CPT0006950001
Normal
0.1
CPT0065820001
Normal
0.1
CPT0087050003
Normal
0.1
CPT0006900003
Tumor
0.1
CPT0088710001
Normal
0.1
CPT0012090003
Normal
0.1
CPT0000640003
Tumor
0.1
CPT0079430001
Normal
0.1
CPT0023690003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0001340003
Tumor
0.1
CPT0001230001
Normal
0.1
CPT0014350001
Normal
0.1
CPT0088900003
Tumor
0.1
CPT0000790001
Normal
0.1
CPT0088630003
Tumor
0.0
CPT0088690003
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0086950003
Tumor
0.0
CPT0081600003
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0019160001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0020120003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0078510003
Tumor
0.0
CPT0025230003
Tumor
0.0
CPT0009080003
Normal
0.0
CPT0014450004
Tumor
0.0
CPT0065810003
Tumor
0.0
CPT0012640003
Normal
0.0
CPT0079380003
Tumor
0.0
CPT0085670003
Tumor
0.0
CPT0020020001
Normal
0.0
CPT0026410003
Tumor
0.0
CPT0014470001
Normal
-0.1
CPT0014370004
Tumor
-0.1
CPT0001540009
Tumor
-0.1
CPT0009020003
Normal
-0.1
CPT0000870016
Tumor
-0.1
CPT0006530001
Normal
-0.1
CPT0089460004
Tumor
-0.1
CPT0077110003
Tumor
-0.1
CPT0026420001
Normal
-0.1
CPT0079510001
Normal
-0.1
CPT0065690003
Tumor
-0.1
CPT0024670003
Tumor
-0.2
CPT0079480003
Tumor
-0.2
CPT0064370003
Tumor
-0.2
CPT0019130003
Tumor
-0.2
CPT0006630003
Tumor
-0.2
CPT0078530001
Normal
-0.2
CPT0075130003
Tumor
-0.2
CPT0092290003
Tumor
-0.2
CPT0012550003
Tumor
-0.2
CPT0092790003
Tumor
-0.2
CPT0063630003
Tumor
-0.2
CPT0006440003
Tumor
-0.2
CPT0000780007
Tumor
-0.3
CPT0001220008
Tumor
-0.3
CPT0025580004
Tumor
-0.3
CPT0012280003
Tumor
-0.3
CPT0015910003
Tumor
-0.3
CPT0077310003
Tumor
-0.3
CPT0009060003
Tumor
-0.3
CPT0065930003
Tumor
-0.3
CPT0079300001
Normal
-0.3
CPT0066470004
Tumor
-0.4
CPT0075170001
Normal
-0.4
CPT0084590001
Normal
-0.4
CPT0079270003
Tumor
-0.4
CPT0002270011
Tumor
-0.4
CPT0081990003
Tumor
-0.4
CPT0012900004
Tumor
-0.5
CPT0021240003
Tumor
-0.5
CPT0063640001
Normal
-0.5
CPT0025110003
Tumor
-0.5
CPT0012570003
Normal
-0.5
CPT0063320003
Tumor
-0.5
CPT0001500009
Tumor
-0.5
CPT0078990003
Tumor
-0.6
CPT0015730003
Tumor
-0.6
CPT0086360003
Tumor
-0.6
CPT0086030003
Tumor
-0.6
CPT0001350001
Normal
-0.6
CPT0025170003
Tumor
-0.6
CPT0007870001
Normal
-0.6
CPT0011410003
Tumor
-0.6
CPT0063330001
Normal
-0.6
CPT0006730001
Normal
-0.6
CPT0007860003
Tumor
-0.6
CPT0066480003
Tumor
-0.6
CPT0012770003
Normal
-0.6
CPT0084560003
Tumor
-0.6
CPT0066430001
Normal
-0.7
CPT0079000001
Normal
-0.7
CPT0012290003
Normal
-0.7
CPT0086370003
Normal
-0.7
CPT0082010001
Normal
-0.7
CPT0078660003
Tumor
-0.7
CPT0078670001
Normal
-0.8
CPT0011240003
Tumor
-0.8
CPT0079230003
Tumor
-0.8
CPT0001510001
Normal
-0.9
CPT0014160003
Tumor
-0.9
CPT0071150004
Tumor
-0.9
CPT0014130001
Normal
-0.9
CPT0066520001
Normal
-1.0
CPT0079180003
Tumor
-1.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
