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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC14L1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
64.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
60.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
58.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
57.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
52.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
51.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
44.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
42.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
40.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
38.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
38.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
34.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
33.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
33.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
31.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
31.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
31.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
30.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
30.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
29.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
29.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
28.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
28.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
28.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
28.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
27.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
27.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
27.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
27.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
26.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
25.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
23.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
23.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
23.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
22.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
22.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
22.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
21.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
21.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
20.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
19.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
19.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
19.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
19.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
18.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
17.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
17.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
16.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
16.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
16.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
16.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
16.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
14.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
14.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
13.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
13.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
12.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
11.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
11.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
10.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
9.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
8.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
7.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC14L1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
62.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
175.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
170.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
165.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
164.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
164.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
162.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
161.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
157.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
156.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
153.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
150.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
150.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
149.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
145.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
144.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
144.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
143.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
143.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
135.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
134.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
132.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
131.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
126.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
124.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
124.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
123.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
123.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
123.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
123.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
122.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
121.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
118.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
117.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
116.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
115.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
115.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
115.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
114.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
113.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
113.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
113.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
112.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
112.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
111.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
111.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
110.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
109.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
108.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
108.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
107.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
107.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
106.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
106.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
106.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
106.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
106.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
105.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
104.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
104.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
103.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
103.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
102.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
102.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
102.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
102.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
102.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
101.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
101.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
100.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
100.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
100.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
100.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
99.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
99.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
98.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
97.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
96.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
96.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
96.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
95.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
94.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
94.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
94.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
94.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
93.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
93.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
92.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
91.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
91.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
91.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
91.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
91.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
90.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
90.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
90.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
90.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
89.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
89.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
89.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
88.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
88.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
87.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
87.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
87.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
87.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
87.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
86.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
86.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
86.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
86.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
86.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
85.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
85.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
85.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
84.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
84.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
84.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
84.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
84.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
84.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
84.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
83.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
83.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
83.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
83.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
82.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
82.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
81.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
81.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
81.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
81.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
81.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
81.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
81.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
81.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
81.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
80.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
80.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
80.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
79.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
79.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
79.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
79.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
78.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
78.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
78.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
78.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
78.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
78.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
77.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
77.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
77.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
77.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
77.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
77.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
77.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
76.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
75.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
75.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
75.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
75.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
75.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
75.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
75.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
75.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
75.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
74.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
74.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
74.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
74.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
74.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
74.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
74.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
73.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
73.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
73.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
73.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
73.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
73.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
72.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
72.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
72.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
72.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
72.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
72.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
71.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
71.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
71.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
71.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
71.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
71.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
70.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
70.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
69.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
69.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
69.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
69.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
68.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
68.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
68.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
68.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
68.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
68.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
67.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
67.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
67.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
67.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
67.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
66.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
66.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
66.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
66.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
66.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
66.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
65.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
65.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
65.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
65.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
64.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
64.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
64.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
64.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
64.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
64.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
64.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
64.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
64.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
63.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
63.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
63.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
62.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
62.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
61.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
61.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
61.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
61.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
61.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
61.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
60.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
60.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
60.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
59.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
59.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
59.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
59.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
59.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
58.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
58.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
58.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
58.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
58.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
58.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
58.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
57.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
57.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
57.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
57.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
57.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
56.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
56.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
56.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
56.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
56.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
56.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
55.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
55.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
55.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
55.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
55.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
53.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
53.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
53.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
53.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
53.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
53.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
53.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
53.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
53.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
52.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
52.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
52.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
52.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
52.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
52.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
51.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
51.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
51.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
51.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
51.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
51.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
51.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
51.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
50.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
50.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
50.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
50.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
50.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
49.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
49.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
49.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
49.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
49.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
49.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
49.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
49.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
49.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
48.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
48.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
48.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
48.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
48.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
48.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
47.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
47.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
47.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
47.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
46.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
46.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
46.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
46.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
46.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
45.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
45.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
45.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
45.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
45.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
45.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
45.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
45.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
44.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
44.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
44.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
44.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
44.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
44.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
44.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
44.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
44.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
43.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
43.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
43.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
43.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
43.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
43.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
43.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
43.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
43.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
43.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
43.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
42.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
42.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
42.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
42.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
42.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
42.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
41.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
41.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
41.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
41.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
41.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
41.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
40.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
40.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
40.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
40.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
40.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
39.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
39.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
39.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
39.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
39.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
39.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
39.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
39.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
38.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
38.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
38.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
38.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
38.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
37.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
37.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
37.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
37.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
37.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
37.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
36.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
36.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
36.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
36.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
36.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
36.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
36.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
35.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
35.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
35.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
35.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
35.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
35.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
35.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
34.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
34.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
34.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
34.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
34.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
34.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
34.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
34.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
34.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
34.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
34.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
34.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
33.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
33.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
33.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
33.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
33.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
33.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
33.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
33.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
33.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
33.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
32.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
32.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
32.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
32.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
32.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
32.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
31.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
31.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
31.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
31.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
31.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
31.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
31.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
31.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
30.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
30.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
30.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
30.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
29.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
29.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
29.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
29.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
28.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
28.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
28.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
28.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
27.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
27.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
27.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
27.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
27.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
27.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
27.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
27.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
26.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
25.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
25.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
25.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
25.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
24.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
24.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
24.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
24.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
24.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
24.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
23.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
23.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
23.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
23.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
22.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
22.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
22.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
22.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
22.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
22.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
22.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
22.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
21.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
21.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
21.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
21.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
20.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
20.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
20.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
20.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
19.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
19.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
19.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
17.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
17.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
17.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
16.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
16.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
16.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
15.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
14.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
14.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
14.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
14.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
13.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
13.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
13.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
13.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
13.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
12.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
12.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
12.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
12.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
12.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
11.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
11.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
11.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
9.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
9.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
7.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
7.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
7.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
7.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
5.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC14L1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
69.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
189.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
161.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
148.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
145.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
140.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
133.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
133.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
119.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
115.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
113.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
111.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
111.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
107.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
104.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
104.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
103.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
101.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
101.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
100.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
99.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
97.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
96.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
95.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
92.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
92.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
91.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
90.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
90.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
87.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
87.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
87.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
85.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
84.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
84.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
83.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
78.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
78.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
76.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
76.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
75.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
74.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
74.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
73.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
73.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
70.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
69.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
69.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
68.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
67.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
66.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
65.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
65.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
64.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
64.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
64.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
63.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
60.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
58.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
58.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
58.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
58.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
56.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
56.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
55.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
55.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
55.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
52.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
48.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
47.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
42.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
40.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
40.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
39.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
39.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
39.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
39.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
38.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
37.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
37.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
36.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
36.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
36.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
35.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
35.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
34.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
34.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
34.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
31.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
31.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
30.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
28.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
28.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
26.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
23.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
22.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
22.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
21.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
21.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
16.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC14L1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
97.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
92.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
85.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
81.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
80.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
76.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
72.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
68.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
65.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
64.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
61.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
61.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
61.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
60.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
58.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
55.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
55.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
55.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
54.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
54.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
53.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
52.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
52.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
51.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
51.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
50.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
47.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
47.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
46.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
46.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
46.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
46.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
46.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
46.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
45.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
45.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
45.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
44.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
44.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
44.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
43.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
43.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
42.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
42.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
41.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
41.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
40.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
40.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
40.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
40.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
40.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
39.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
39.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
39.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
38.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
38.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
38.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
38.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
38.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
38.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
37.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
37.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
36.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
36.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
36.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
35.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
35.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
35.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
35.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
35.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
35.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
35.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
34.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
34.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
34.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
34.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
34.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
34.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
34.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
34.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
33.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
33.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
33.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
33.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
33.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
33.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
33.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
32.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
32.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
32.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
32.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
32.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
32.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
32.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
32.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
32.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
31.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
31.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
31.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
31.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
31.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
30.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
30.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
30.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
30.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
30.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
30.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
30.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
30.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
29.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
29.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
29.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
29.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
29.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
29.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
28.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
28.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
28.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
28.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
28.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
28.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
28.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
28.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
27.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
27.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
27.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
27.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
27.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
27.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
27.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
27.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
27.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
27.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
26.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
26.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
26.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
25.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
25.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
25.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
25.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
25.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
25.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
25.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
25.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
24.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
24.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
24.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
24.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
24.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
24.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
24.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
24.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
24.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
24.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
24.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
24.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
24.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
24.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
24.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
24.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
24.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
23.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
23.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
23.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
23.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
23.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
23.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
23.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
23.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
23.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
22.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
22.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
22.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
22.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
22.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
22.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
22.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
21.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
21.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
21.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
21.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
21.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
21.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
20.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
20.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
20.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
20.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
20.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
20.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
20.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
20.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
19.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
19.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
19.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
19.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
19.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
19.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
19.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
19.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
19.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
18.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
18.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
18.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
17.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
17.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
17.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
17.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
16.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
16.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
16.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
16.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
16.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
16.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
16.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
16.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
16.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
16.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
16.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
16.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
15.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
15.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
15.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
15.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
15.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
15.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
14.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
14.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
14.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
14.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
14.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
14.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
14.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
14.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
13.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
13.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
13.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
13.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
13.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
13.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
13.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
12.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
12.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
12.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
12.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
12.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
12.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
11.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
11.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
11.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
11.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
11.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
11.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
11.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
11.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
10.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
10.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
10.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
10.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
10.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
10.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
10.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
10.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
9.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
9.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
9.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
9.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
8.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
8.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
8.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
7.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
7.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
7.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
7.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
7.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
6.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
6.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
6.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
6.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
6.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
5.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
5.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
5.3
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0081880003
Tumor
1.0
CPT0012550003
Tumor
0.9
CPT0065690003
Tumor
0.8
CPT0020120003
Tumor
0.7
CPT0001340003
Tumor
0.6
CPT0007860003
Tumor
0.6
CPT0092790003
Tumor
0.6
CPT0092290003
Tumor
0.6
CPT0086030003
Tumor
0.5
CPT0065750003
Tumor
0.5
CPT0064370003
Tumor
0.5
CPT0077490003
Tumor
0.5
CPT0025170003
Tumor
0.5
CPT0078930003
Tumor
0.5
CPT0069160003
Tumor
0.4
CPT0076350001
Normal
0.4
CPT0006630003
Tumor
0.4
CPT0066470004
Tumor
0.4
CPT0089460004
Tumor
0.4
CPT0063320003
Tumor
0.4
CPT0088760003
Tumor
0.4
CPT0089020003
Tumor
0.4
CPT0088500001
Normal
0.4
CPT0019990003
Tumor
0.4
CPT0078510003
Tumor
0.4
CPT0079380003
Tumor
0.4
CPT0078530001
Normal
0.4
CPT0012090003
Normal
0.4
CPT0014160003
Tumor
0.3
CPT0066430001
Normal
0.3
CPT0075720003
Tumor
0.3
CPT0078830003
Tumor
0.3
CPT0025290003
Tumor
0.3
CPT0088690003
Tumor
0.3
CPT0013790003
Normal
0.3
CPT0092740003
Normal
0.3
CPT0079510001
Normal
0.3
CPT0088480003
Tumor
0.3
CPT0012290003
Normal
0.3
CPT0065450001
Normal
0.3
CPT0026420001
Normal
0.3
CPT0075560003
Tumor
0.3
CPT0086370003
Normal
0.3
CPT0018250001
Normal
0.3
CPT0001500009
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0015910003
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0078840001
Normal
0.2
CPT0012280003
Tumor
0.2
CPT0017450001
Normal
0.2
CPT0088780001
Normal
0.2
CPT0015810003
Tumor
0.2
CPT0077140001
Normal
0.2
CPT0023350003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0092310003
Normal
0.2
CPT0012670003
Tumor
0.2
CPT0014130001
Normal
0.2
CPT0065870003
Tumor
0.2
CPT0012180003
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0001350001
Normal
0.2
CPT0089040001
Normal
0.2
CPT0006730001
Normal
0.2
CPT0020020001
Normal
0.2
CPT0088710001
Normal
0.1
CPT0012770003
Normal
0.1
CPT0065810003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0071150004
Tumor
0.1
CPT0025060001
Normal
0.1
CPT0012080003
Tumor
0.1
CPT0009080003
Normal
0.1
CPT0063640001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0069190001
Normal
0.1
CPT0012370003
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0079410003
Tumor
0.1
CPT0006950001
Normal
0.1
CPT0092730003
Tumor
0.1
CPT0010160003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0012920003
Normal
0.1
CPT0077500001
Normal
0.1
CPT0012570003
Normal
0.1
CPT0000790001
Normal
0.1
CPT0075570001
Normal
0.1
CPT0081990003
Tumor
0.1
CPT0076330003
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0021240003
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0015730003
Tumor
0.0
CPT0092800003
Normal
0.0
CPT0069010001
Normal
0.0
CPT0020130001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0024670003
Tumor
0.0
CPT0077310003
Tumor
0.0
CPT0023360001
Normal
0.0
CPT0010170001
Normal
0.0
CPT0084590001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0009020003
Normal
0.0
CPT0086970003
Normal
0.0
CPT0025920001
Normal
0.0
CPT0000780007
Tumor
0.0
CPT0017850003
Tumor
0.0
CPT0066480003
Tumor
0.0
CPT0088970003
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0001180009
Tumor
0.0
CPT0078660003
Tumor
0.0
CPT0089480003
Normal
0.0
CPT0075130003
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0012900004
Tumor
0.0
CPT0017410003
Tumor
0.0
CPT0011410003
Tumor
0.0
CPT0009000003
Tumor
0.0
CPT0025610001
Normal
0.0
CPT0078940001
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0092160003
Tumor
-0.1
CPT0007470001
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0023690003
Tumor
-0.1
CPT0001190001
Normal
-0.1
CPT0025110003
Tumor
-0.1
CPT0007870001
Normal
-0.1
CPT0081600003
Tumor
-0.1
CPT0064400001
Normal
-0.1
CPT0088630003
Tumor
-0.1
CPT0001220008
Tumor
-0.1
CPT0065820001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0077110003
Tumor
-0.1
CPT0001540009
Tumor
-0.2
CPT0012640003
Normal
-0.2
CPT0063330001
Normal
-0.2
CPT0001260009
Tumor
-0.2
CPT0024680001
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0086890003
Normal
-0.2
CPT0001230001
Normal
-0.2
CPT0025580004
Tumor
-0.2
CPT0088640003
Normal
-0.2
CPT0085670003
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0086870003
Tumor
-0.2
CPT0001270001
Normal
-0.2
CPT0001550001
Normal
-0.2
CPT0092190003
Normal
-0.2
CPT0002350011
Tumor
-0.3
CPT0086820003
Tumor
-0.3
CPT0079180003
Tumor
-0.3
CPT0002370001
Normal
-0.3
CPT0026410003
Tumor
-0.3
CPT0065430003
Tumor
-0.3
CPT0025880003
Tumor
-0.3
CPT0086950003
Tumor
-0.3
CPT0025050003
Tumor
-0.4
CPT0007320003
Tumor
-0.4
CPT0009060003
Tumor
-0.4
CPT0000640003
Tumor
-0.4
CPT0063630003
Tumor
-0.4
CPT0078800003
Tumor
-0.5
CPT0010120001
Normal
-0.5
CPT0084560003
Tumor
-0.5
CPT0010110003
Tumor
-0.6
CPT0002270011
Tumor
-0.6
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0088900003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0014370004
Tumor
N/A
CPT0079000001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0019160001
Normal
N/A
CPT0014450004
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0079300001
Normal
N/A
CPT0000890001
Normal
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.