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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
REEP5 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
132.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
295.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
285.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
236.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
226.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
222.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
216.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
214.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
195.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
179.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
175.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
175.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
175.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
174.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
170.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
170.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
169.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
166.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
164.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
164.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
163.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
160.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
154.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
150.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
145.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
144.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
143.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
141.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
141.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
137.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
134.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
130.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
125.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
122.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
120.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
118.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
118.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
114.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
113.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
110.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
107.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
104.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
104.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
103.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
96.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
95.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
94.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
93.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
92.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
91.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
88.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
81.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
79.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
77.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
76.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
74.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
73.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
69.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
65.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
62.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
58.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
57.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
56.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
54.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
REEP5 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
119.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
369.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
319.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
297.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
251.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
246.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
232.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
227.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
226.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
223.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
221.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
220.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
218.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
217.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
216.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
204.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
203.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
202.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
199.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
198.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
198.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
193.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
191.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
190.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
189.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
188.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
188.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
187.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
186.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
185.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
185.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
185.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
183.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
182.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
181.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
181.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
181.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
179.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
179.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
179.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
179.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
179.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
178.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
178.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
177.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
176.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
176.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
176.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
176.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
175.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
175.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
175.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
175.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
174.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
174.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
173.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
172.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
172.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
171.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
171.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
170.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
170.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
170.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
170.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
170.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
168.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
168.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
167.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
167.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
167.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
166.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
166.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
165.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
165.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
164.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
164.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
164.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
163.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
162.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
161.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
161.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
160.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
159.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
159.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
157.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
157.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
157.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
155.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
155.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
155.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
155.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
155.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
154.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
154.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
154.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
154.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
153.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
153.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
153.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
153.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
153.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
153.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
152.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
151.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
150.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
150.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
150.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
149.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
149.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
149.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
149.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
148.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
148.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
148.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
147.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
147.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
147.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
147.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
147.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
147.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
146.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
146.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
146.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
146.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
145.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
145.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
145.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
145.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
144.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
144.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
144.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
144.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
144.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
144.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
144.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
143.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
143.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
143.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
142.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
142.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
142.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
142.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
141.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
141.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
141.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
140.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
140.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
140.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
140.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
139.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
139.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
139.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
138.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
138.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
138.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
138.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
137.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
137.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
137.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
137.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
137.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
136.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
136.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
136.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
135.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
135.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
135.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
134.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
134.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
134.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
133.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
133.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
133.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
133.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
133.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
132.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
131.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
131.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
131.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
131.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
130.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
130.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
130.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
130.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
130.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
130.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
129.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
129.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
129.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
129.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
129.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
128.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
128.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
128.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
128.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
127.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
127.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
127.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
127.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
127.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
126.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
126.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
125.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
125.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
125.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
124.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
124.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
124.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
124.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
123.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
123.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
123.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
122.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
122.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
122.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
122.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
122.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
121.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
121.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
121.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
120.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
120.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
120.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
120.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
120.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
120.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
119.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
119.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
119.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
119.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
118.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
118.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
118.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
117.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
117.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
117.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
116.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
116.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
116.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
116.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
116.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
115.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
115.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
115.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
115.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
115.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
115.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
114.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
114.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
114.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
114.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
114.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
114.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
114.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
114.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
114.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
113.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
113.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
113.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
113.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
113.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
113.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
113.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
113.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
113.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
113.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
113.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
113.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
112.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
112.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
112.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
112.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
111.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
111.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
111.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
111.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
110.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
110.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
110.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
109.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
109.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
109.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
109.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
109.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
108.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
108.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
108.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
108.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
108.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
108.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
108.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
107.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
107.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
107.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
107.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
107.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
107.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
107.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
106.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
106.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
106.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
106.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
106.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
106.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
106.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
105.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
105.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
105.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
105.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
105.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
105.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
104.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
104.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
104.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
104.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
103.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
103.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
103.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
103.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
103.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
103.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
103.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
103.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
102.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
102.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
102.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
102.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
102.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
102.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
102.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
102.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
102.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
102.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
102.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
101.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
101.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
101.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
101.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
101.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
101.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
101.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
100.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
100.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
100.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
100.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
100.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
100.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
100.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
100.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
100.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
100.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
99.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
99.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
99.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
99.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
98.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
98.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
98.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
98.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
97.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
97.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
97.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
97.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
96.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
96.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
96.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
94.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
94.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
94.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
94.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
94.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
94.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
93.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
93.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
93.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
93.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
93.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
93.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
93.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
93.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
92.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
92.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
92.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
91.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
91.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
91.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
91.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
90.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
90.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
90.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
90.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
90.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
89.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
89.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
89.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
89.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
89.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
89.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
89.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
88.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
88.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
88.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
88.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
87.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
87.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
86.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
86.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
85.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
85.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
85.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
85.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
85.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
84.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
84.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
84.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
83.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
83.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
83.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
83.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
83.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
82.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
82.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
82.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
81.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
81.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
81.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
81.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
81.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
81.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
81.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
81.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
80.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
80.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
80.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
80.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
80.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
80.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
79.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
79.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
79.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
79.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
79.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
79.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
78.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
78.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
78.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
78.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
78.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
78.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
78.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
77.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
77.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
76.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
76.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
76.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
76.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
75.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
75.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
75.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
75.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
75.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
74.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
74.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
74.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
74.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
74.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
74.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
73.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
72.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
72.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
72.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
72.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
71.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
71.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
71.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
69.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
69.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
69.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
69.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
68.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
68.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
67.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
67.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
67.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
67.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
66.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
65.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
65.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
64.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
63.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
63.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
63.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
62.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
62.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
62.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
62.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
60.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
59.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
58.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
58.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
58.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
56.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
54.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
54.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
53.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
53.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
51.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
49.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
49.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
48.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
48.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
48.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
46.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
46.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
44.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
43.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
39.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
38.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
35.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
34.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
34.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
REEP5 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
140.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
254.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
248.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
234.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
229.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
214.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
202.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
188.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
186.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
185.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
185.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
183.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
181.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
180.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
180.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
175.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
175.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
172.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
171.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
170.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
168.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
168.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
167.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
166.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
166.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
166.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
166.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
164.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
162.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
162.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
159.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
159.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
159.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
159.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
157.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
157.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
157.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
156.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
152.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
152.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
149.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
148.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
147.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
146.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
146.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
146.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
145.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
143.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
142.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
140.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
138.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
138.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
134.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
133.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
132.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
131.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
130.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
129.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
129.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
128.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
127.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
127.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
127.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
127.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
126.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
125.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
124.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
124.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
121.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
121.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
121.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
118.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
118.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
117.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
116.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
114.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
114.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
111.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
110.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
109.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
107.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
103.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
102.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
100.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
100.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
100.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
99.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
98.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
97.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
97.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
92.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
92.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
90.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
89.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
87.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
82.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
79.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
79.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
74.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
71.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
REEP5 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
99.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
270.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
259.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
253.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
244.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
234.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
232.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
199.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
196.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
188.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
185.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
182.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
182.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
181.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
179.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
176.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
176.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
175.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
172.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
170.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
167.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
166.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
165.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
164.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
164.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
163.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
163.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
162.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
159.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
159.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
158.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
155.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
154.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
153.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
153.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
150.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
150.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
150.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
147.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
147.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
146.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
145.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
145.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
144.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
143.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
141.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
140.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
138.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
138.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
138.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
136.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
136.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
136.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
132.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
132.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
132.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
131.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
130.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
130.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
129.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
128.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
128.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
127.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
126.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
124.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
124.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
124.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
121.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
121.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
121.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
121.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
119.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
119.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
118.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
118.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
118.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
117.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
116.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
116.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
116.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
116.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
115.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
114.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
114.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
113.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
112.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
112.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
112.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
111.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
111.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
111.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
110.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
110.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
109.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
109.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
109.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
107.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
107.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
106.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
106.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
105.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
104.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
104.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
103.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
103.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
103.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
102.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
102.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
102.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
101.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
100.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
100.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
100.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
100.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
99.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
99.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
98.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
97.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
97.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
97.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
96.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
96.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
96.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
95.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
95.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
95.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
94.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
94.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
94.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
93.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
93.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
93.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
93.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
93.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
93.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
92.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
91.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
91.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
90.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
90.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
90.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
90.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
90.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
89.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
89.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
88.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
88.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
88.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
88.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
87.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
87.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
87.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
87.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
86.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
85.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
85.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
84.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
84.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
83.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
83.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
83.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
83.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
82.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
82.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
82.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
82.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
81.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
81.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
81.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
81.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
81.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
80.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
80.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
80.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
79.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
79.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
79.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
79.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
78.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
78.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
78.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
78.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
77.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
77.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
77.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
77.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
77.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
76.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
76.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
76.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
76.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
76.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
76.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
76.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
75.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
74.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
74.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
74.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
74.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
74.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
74.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
73.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
73.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
73.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
73.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
72.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
72.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
72.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
72.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
72.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
72.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
72.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
71.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
71.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
70.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
70.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
69.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
69.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
68.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
67.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
67.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
67.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
66.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
66.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
66.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
66.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
66.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
65.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
65.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
64.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
63.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
63.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
62.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
62.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
62.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
61.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
60.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
60.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
60.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
60.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
60.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
58.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
58.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
57.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
56.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
55.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
54.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
54.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
54.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
54.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
53.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
53.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
53.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
53.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
53.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
52.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
52.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
51.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
51.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
51.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
51.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
51.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
51.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
50.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
50.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
50.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
49.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
48.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
47.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
47.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
47.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
46.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
46.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
46.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
45.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
41.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
40.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
39.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
38.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
37.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
34.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
27.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
25.9
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0002350011
Tumor
1.9
CPT0025110003
Tumor
1.5
CPT0079270003
Tumor
1.0
CPT0025880003
Tumor
0.8
CPT0078660003
Tumor
0.7
CPT0079300001
Normal
0.6
CPT0007320003
Tumor
0.6
CPT0006730001
Normal
0.6
CPT0023350003
Tumor
0.6
CPT0010110003
Tumor
0.6
CPT0023360001
Normal
0.6
CPT0079510001
Normal
0.5
CPT0001230001
Normal
0.5
CPT0010170001
Normal
0.5
CPT0065430003
Tumor
0.5
CPT0023710001
Normal
0.5
CPT0001180009
Tumor
0.4
CPT0078800003
Tumor
0.4
CPT0079430001
Normal
0.4
CPT0092160003
Tumor
0.4
CPT0065450001
Normal
0.4
CPT0001340003
Tumor
0.4
CPT0066430001
Normal
0.4
CPT0025060001
Normal
0.4
CPT0015730003
Tumor
0.4
CPT0088640003
Normal
0.4
CPT0069000003
Tumor
0.4
CPT0006950001
Normal
0.3
CPT0078840001
Normal
0.3
CPT0012550003
Tumor
0.3
CPT0014350001
Normal
0.3
CPT0000790001
Normal
0.3
CPT0088780001
Normal
0.3
CPT0092800003
Normal
0.3
CPT0025920001
Normal
0.3
CPT0013790003
Normal
0.3
CPT0064400001
Normal
0.3
CPT0007870001
Normal
0.3
CPT0092310003
Normal
0.3
CPT0002370001
Normal
0.3
CPT0001510001
Normal
0.3
CPT0088920001
Normal
0.3
CPT0078940001
Normal
0.2
CPT0086820003
Tumor
0.2
CPT0000890001
Normal
0.2
CPT0088690003
Tumor
0.2
CPT0078530001
Normal
0.2
CPT0001190001
Normal
0.2
CPT0088500001
Normal
0.2
CPT0086890003
Normal
0.2
CPT0001550001
Normal
0.2
CPT0069190001
Normal
0.2
CPT0065820001
Normal
0.2
CPT0078830003
Tumor
0.2
CPT0086370003
Normal
0.2
CPT0026420001
Normal
0.2
CPT0006530001
Normal
0.2
CPT0081620001
Normal
0.1
CPT0075130003
Tumor
0.1
CPT0088710001
Normal
0.1
CPT0078670001
Normal
0.1
CPT0007470001
Normal
0.1
CPT0010120001
Normal
0.1
CPT0088480003
Tumor
0.1
CPT0012640003
Normal
0.1
CPT0019160001
Normal
0.1
CPT0089480003
Normal
0.1
CPT0086970003
Normal
0.1
CPT0000660001
Normal
0.1
CPT0025350003
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0014450004
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0012180003
Tumor
0.1
CPT0078990003
Tumor
0.1
CPT0065810003
Tumor
0.1
CPT0079380003
Tumor
0.1
CPT0063330001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0001540009
Tumor
0.1
CPT0075170001
Normal
0.1
CPT0077500001
Normal
0.1
CPT0001350001
Normal
0.1
CPT0025610001
Normal
0.1
CPT0020130001
Normal
0.0
CPT0077140001
Normal
0.0
CPT0087050003
Normal
0.0
CPT0086830003
Normal
0.0
CPT0079000001
Normal
0.0
CPT0092740003
Normal
0.0
CPT0025290003
Tumor
0.0
CPT0011410003
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0001260009
Tumor
0.0
CPT0014470001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0012280003
Tumor
0.0
CPT0092190003
Normal
0.0
CPT0021240003
Tumor
0.0
CPT0086360003
Tumor
0.0
CPT0088550004
Tumor
0.0
CPT0064370003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0024670003
Tumor
-0.1
CPT0007860003
Tumor
-0.1
CPT0087040003
Tumor
-0.1
CPT0092730003
Tumor
-0.1
CPT0000870016
Tumor
-0.1
CPT0012670003
Tumor
-0.1
CPT0066520001
Normal
-0.1
CPT0076330003
Tumor
-0.1
CPT0075570001
Normal
-0.1
CPT0014370004
Tumor
-0.1
CPT0001270001
Normal
-0.1
CPT0019130003
Tumor
-0.1
CPT0012770003
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0018250001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0084590001
Normal
-0.2
CPT0077110003
Tumor
-0.2
CPT0025170003
Tumor
-0.2
CPT0078930003
Tumor
-0.2
CPT0002270011
Tumor
-0.2
CPT0000640003
Tumor
-0.2
CPT0065690003
Tumor
-0.2
CPT0081880003
Tumor
-0.2
CPT0014160003
Tumor
-0.2
CPT0089040001
Normal
-0.2
CPT0066470004
Tumor
-0.3
CPT0086870003
Tumor
-0.3
CPT0069160003
Tumor
-0.3
CPT0086950003
Tumor
-0.3
CPT0020120003
Tumor
-0.3
CPT0025230003
Tumor
-0.3
CPT0088900003
Tumor
-0.3
CPT0063630003
Tumor
-0.3
CPT0085670003
Tumor
-0.3
CPT0077310003
Tumor
-0.3
CPT0025050003
Tumor
-0.3
CPT0025580004
Tumor
-0.3
CPT0088630003
Tumor
-0.3
CPT0081600003
Tumor
-0.3
CPT0088760003
Tumor
-0.3
CPT0006440003
Tumor
-0.3
CPT0076350001
Normal
-0.3
CPT0012570003
Normal
-0.3
CPT0010160003
Tumor
-0.4
CPT0009020003
Normal
-0.4
CPT0015910003
Tumor
-0.4
CPT0001220008
Tumor
-0.4
CPT0079480003
Tumor
-0.4
CPT0092790003
Tumor
-0.4
CPT0012370003
Tumor
-0.4
CPT0012090003
Normal
-0.4
CPT0001500009
Tumor
-0.4
CPT0015810003
Tumor
-0.4
CPT0071150004
Tumor
-0.4
CPT0089460004
Tumor
-0.5
CPT0009080003
Normal
-0.5
CPT0006900003
Tumor
-0.5
CPT0084560003
Tumor
-0.5
CPT0077320001
Normal
-0.5
CPT0024680001
Normal
-0.5
CPT0065750003
Tumor
-0.5
CPT0075720003
Tumor
-0.5
CPT0026410003
Tumor
-0.5
CPT0023690003
Tumor
-0.6
CPT0006630003
Tumor
-0.6
CPT0089020003
Tumor
-0.6
CPT0081990003
Tumor
-0.6
CPT0019990003
Tumor
-0.6
CPT0079180003
Tumor
-0.6
CPT0078510003
Tumor
-0.6
CPT0017850003
Tumor
-0.7
CPT0063320003
Tumor
-0.7
CPT0075560003
Tumor
-0.7
CPT0066480003
Tumor
-0.7
CPT0092290003
Tumor
-0.7
CPT0088970003
Tumor
-0.7
CPT0065930003
Tumor
-0.8
CPT0012920003
Normal
-0.8
CPT0086030003
Tumor
-0.8
CPT0012080003
Tumor
-0.9
CPT0009000003
Tumor
-1.0
CPT0000780007
Tumor
-1.0
CPT0009060003
Tumor
-1.1
CPT0011240003
Tumor
-1.1
CPT0017410003
Tumor
-1.3
CPT0012900004
Tumor
-1.3
CPT0077490003
Tumor
-1.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.