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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NEDD8 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
109.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
250.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
188.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
182.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
181.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
174.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
173.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
159.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
159.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
155.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
154.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
150.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
141.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
140.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
135.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
128.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
126.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
125.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
124.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
123.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
121.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
119.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
117.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
115.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
114.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
113.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
113.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
111.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
110.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
109.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
107.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
106.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
105.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
105.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
105.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
103.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
103.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
102.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
101.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
100.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
97.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
96.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
96.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
96.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
94.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
91.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
90.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
86.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
83.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
81.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
80.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
78.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
74.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
73.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
71.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
67.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
67.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
65.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
63.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
63.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
62.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
55.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
49.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
48.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NEDD8 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
88.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
218.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
217.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
178.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
171.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
169.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
167.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
166.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
162.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
159.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
156.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
154.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
153.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
150.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
148.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
148.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
144.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
142.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
141.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
139.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
136.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
135.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
135.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
134.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
134.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
133.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
131.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
131.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
131.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
130.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
130.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
129.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
129.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
128.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
127.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
127.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
125.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
125.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
124.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
123.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
122.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
122.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
121.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
121.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
121.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
121.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
121.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
120.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
120.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
119.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
119.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
119.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
119.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
119.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
118.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
118.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
118.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
118.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
117.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
117.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
117.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
117.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
116.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
116.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
116.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
116.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
116.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
116.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
116.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
116.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
116.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
116.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
115.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
115.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
115.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
114.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
114.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
114.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
114.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
114.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
114.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
114.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
114.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
114.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
114.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
113.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
113.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
113.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
113.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
113.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
113.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
112.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
112.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
112.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
112.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
112.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
112.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
111.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
111.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
111.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
111.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
111.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
110.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
110.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
110.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
110.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
109.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
109.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
109.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
109.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
109.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
109.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
109.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
109.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
108.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
108.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
108.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
108.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
108.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
108.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
108.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
108.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
108.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
107.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
107.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
107.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
107.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
106.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
106.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
106.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
106.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
106.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
105.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
105.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
105.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
105.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
104.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
104.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
104.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
103.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
102.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
102.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
102.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
102.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
102.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
102.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
102.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
101.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
101.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
101.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
100.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
100.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
100.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
100.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
99.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
99.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
99.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
99.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
98.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
98.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
98.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
98.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
98.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
97.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
97.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
97.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
97.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
97.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
97.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
97.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
97.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
96.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
96.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
96.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
96.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
96.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
96.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
96.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
96.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
96.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
96.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
95.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
95.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
95.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
95.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
95.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
94.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
94.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
94.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
94.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
94.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
94.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
94.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
93.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
93.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
93.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
93.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
93.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
93.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
93.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
93.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
93.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
93.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
92.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
92.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
92.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
92.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
92.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
92.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
92.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
92.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
91.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
91.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
91.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
91.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
91.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
91.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
91.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
91.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
91.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
91.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
91.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
91.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
91.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
90.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
90.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
90.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
90.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
90.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
90.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
90.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
90.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
90.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
89.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
89.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
89.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
89.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
89.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
89.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
89.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
88.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
88.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
88.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
88.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
88.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
88.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
88.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
88.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
88.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
88.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
88.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
88.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
87.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
87.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
87.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
87.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
87.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
87.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
87.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
87.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
87.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
86.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
86.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
86.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
86.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
86.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
86.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
85.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
85.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
85.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
85.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
85.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
85.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
85.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
85.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
85.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
84.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
84.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
84.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
84.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
84.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
84.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
84.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
84.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
83.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
83.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
83.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
83.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
83.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
83.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
83.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
83.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
83.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
83.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
82.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
82.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
82.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
82.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
82.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
82.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
82.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
81.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
81.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
81.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
81.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
81.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
81.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
81.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
81.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
81.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
81.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
81.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
81.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
81.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
81.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
80.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
80.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
80.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
80.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
80.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
80.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
80.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
80.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
80.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
80.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
80.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
80.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
79.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
79.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
79.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
79.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
79.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
79.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
78.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
78.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
78.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
78.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
78.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
77.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
77.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
77.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
77.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
77.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
77.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
77.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
77.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
76.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
76.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
76.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
76.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
76.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
76.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
75.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
75.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
75.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
75.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
75.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
75.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
75.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
75.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
74.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
74.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
74.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
74.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
74.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
74.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
74.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
74.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
74.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
74.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
74.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
73.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
73.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
73.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
73.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
73.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
73.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
73.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
72.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
72.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
72.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
72.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
72.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
72.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
72.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
72.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
72.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
72.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
72.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
72.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
71.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
71.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
71.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
70.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
70.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
70.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
70.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
70.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
69.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
69.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
69.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
69.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
69.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
69.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
69.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
69.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
69.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
68.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
68.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
68.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
67.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
67.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
67.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
66.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
66.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
66.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
66.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
66.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
66.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
66.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
65.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
65.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
65.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
65.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
65.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
65.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
65.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
64.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
64.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
64.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
64.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
64.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
64.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
64.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
63.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
63.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
63.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
63.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
62.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
62.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
62.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
62.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
62.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
62.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
62.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
61.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
61.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
61.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
61.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
61.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
61.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
60.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
60.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
60.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
60.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
60.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
60.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
59.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
59.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
59.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
59.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
58.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
58.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
58.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
58.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
58.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
58.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
58.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
57.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
57.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
57.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
57.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
57.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
57.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
56.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
56.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
56.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
55.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
55.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
55.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
55.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
54.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
54.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
54.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
54.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
54.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
53.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
53.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
53.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
52.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
52.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
52.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
52.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
51.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
50.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
50.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
49.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
49.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
49.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
49.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
48.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
47.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
47.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
47.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
47.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
45.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
44.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
44.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
43.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
43.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
43.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
42.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
42.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
41.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
41.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
41.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
40.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
40.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
39.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
33.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
32.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NEDD8 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
80.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
135.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
127.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
120.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
117.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
112.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
112.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
112.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
110.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
110.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
109.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
107.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
106.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
105.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
104.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
101.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
100.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
98.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
98.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
97.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
97.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
96.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
96.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
95.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
94.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
94.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
93.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
91.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
91.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
90.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
90.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
90.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
90.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
90.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
87.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
87.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
86.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
86.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
84.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
84.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
84.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
83.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
82.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
82.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
82.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
82.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
82.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
81.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
81.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
81.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
81.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
80.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
79.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
78.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
78.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
78.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
78.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
77.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
76.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
76.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
76.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
75.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
75.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
75.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
75.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
74.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
72.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
72.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
70.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
70.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
70.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
70.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
70.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
70.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
69.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
68.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
68.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
68.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
66.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
65.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
63.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
63.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
61.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
59.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
59.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
57.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
56.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
56.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
55.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
54.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
53.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
53.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
51.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
48.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
48.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
45.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
44.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
44.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
43.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
42.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NEDD8 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
105.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
651.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
214.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
200.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
196.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
177.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
177.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
177.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
176.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
169.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
166.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
159.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
157.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
155.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
154.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
152.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
149.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
148.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
147.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
147.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
143.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
143.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
141.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
141.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
141.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
140.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
139.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
139.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
139.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
138.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
138.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
138.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
138.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
137.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
137.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
137.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
137.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
137.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
136.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
136.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
135.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
135.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
134.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
134.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
133.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
133.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
133.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
133.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
132.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
131.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
131.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
131.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
130.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
130.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
129.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
129.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
128.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
127.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
126.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
126.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
125.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
125.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
125.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
124.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
122.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
122.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
122.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
122.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
121.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
121.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
120.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
120.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
120.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
119.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
119.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
119.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
119.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
119.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
118.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
118.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
118.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
116.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
116.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
116.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
115.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
115.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
114.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
114.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
114.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
114.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
113.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
113.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
113.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
113.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
113.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
112.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
112.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
112.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
112.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
112.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
111.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
111.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
111.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
110.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
110.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
110.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
110.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
109.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
109.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
108.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
108.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
108.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
108.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
108.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
108.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
108.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
107.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
107.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
107.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
107.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
106.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
106.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
106.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
106.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
106.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
105.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
105.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
105.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
105.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
104.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
104.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
104.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
104.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
104.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
103.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
103.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
103.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
103.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
103.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
103.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
102.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
102.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
102.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
102.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
101.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
101.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
101.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
101.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
101.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
100.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
99.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
99.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
99.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
99.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
98.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
98.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
98.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
98.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
97.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
97.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
97.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
97.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
96.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
96.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
96.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
96.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
96.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
96.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
96.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
96.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
96.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
95.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
95.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
95.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
95.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
95.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
95.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
95.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
95.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
95.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
94.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
94.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
94.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
94.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
94.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
93.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
93.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
92.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
92.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
92.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
92.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
92.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
91.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
91.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
91.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
90.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
90.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
90.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
89.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
89.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
89.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
89.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
89.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
89.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
89.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
88.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
88.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
87.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
86.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
86.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
86.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
86.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
85.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
85.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
85.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
84.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
83.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
83.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
83.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
83.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
83.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
83.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
82.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
82.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
82.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
81.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
81.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
81.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
80.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
78.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
78.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
77.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
77.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
77.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
77.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
77.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
76.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
75.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
75.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
75.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
75.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
75.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
74.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
73.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
73.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
72.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
72.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
71.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
71.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
70.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
70.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
69.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
68.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
67.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
67.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
67.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
66.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
66.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
66.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
66.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
66.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
65.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
65.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
65.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
65.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
65.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
63.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
62.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
61.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
60.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
60.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
57.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
57.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
57.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
53.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
53.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
52.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
52.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
51.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
50.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
42.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
36.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
7.1
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
0.8
CPT0000640003
Tumor
0.7
CPT0065930003
Tumor
0.7
CPT0007860003
Tumor
0.5
CPT0002270011
Tumor
0.4
CPT0006440003
Tumor
0.4
CPT0011240003
Tumor
0.4
CPT0006630003
Tumor
0.4
CPT0009020003
Normal
0.4
CPT0010120001
Normal
0.4
CPT0024680001
Normal
0.3
CPT0025110003
Tumor
0.3
CPT0081880003
Tumor
0.3
CPT0077490003
Tumor
0.3
CPT0063320003
Tumor
0.3
CPT0012640003
Normal
0.3
CPT0088550004
Tumor
0.3
CPT0009000003
Tumor
0.3
CPT0000780007
Tumor
0.3
CPT0079300001
Normal
0.3
CPT0078990003
Tumor
0.3
CPT0012570003
Normal
0.3
CPT0025610001
Normal
0.3
CPT0081990003
Tumor
0.3
CPT0014370004
Tumor
0.2
CPT0063330001
Normal
0.2
CPT0092190003
Normal
0.2
CPT0012900004
Tumor
0.2
CPT0017850003
Tumor
0.2
CPT0078660003
Tumor
0.2
CPT0078800003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0088970003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0009080003
Normal
0.2
CPT0066480003
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0011410003
Tumor
0.2
CPT0017410003
Tumor
0.2
CPT0075130003
Tumor
0.2
CPT0012920003
Normal
0.2
CPT0078530001
Normal
0.2
CPT0021240003
Tumor
0.2
CPT0002370001
Normal
0.2
CPT0025880003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0069010001
Normal
0.2
CPT0018250001
Normal
0.2
CPT0079000001
Normal
0.2
CPT0001340003
Tumor
0.1
CPT0001550001
Normal
0.1
CPT0075720003
Tumor
0.1
CPT0064400001
Normal
0.1
CPT0001230001
Normal
0.1
CPT0086890003
Normal
0.1
CPT0079270003
Tumor
0.1
CPT0086820003
Tumor
0.1
CPT0088500001
Normal
0.1
CPT0084590001
Normal
0.1
CPT0076330003
Tumor
0.1
CPT0014350001
Normal
0.1
CPT0086950003
Tumor
0.1
CPT0015730003
Tumor
0.1
CPT0088780001
Normal
0.1
CPT0078670001
Normal
0.1
CPT0015910003
Tumor
0.1
CPT0012090003
Normal
0.1
CPT0071150004
Tumor
0.1
CPT0023710001
Normal
0.1
CPT0077320001
Normal
0.1
CPT0079510001
Normal
0.1
CPT0002350011
Tumor
0.1
CPT0012080003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0088640003
Normal
0.1
CPT0069160003
Tumor
0.1
CPT0000660001
Normal
0.1
CPT0078940001
Normal
0.1
CPT0007470001
Normal
0.1
CPT0075570001
Normal
0.1
CPT0019160001
Normal
0.1
CPT0012770003
Normal
0.1
CPT0001540009
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0026410003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0079480003
Tumor
0.0
CPT0077500001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0010170001
Normal
0.0
CPT0014470001
Normal
0.0
CPT0092730003
Tumor
0.0
CPT0025290003
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0019130003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0088900003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0066430001
Normal
0.0
CPT0084560003
Tumor
0.0
CPT0086870003
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0082010001
Normal
0.0
CPT0025060001
Normal
0.0
CPT0012550003
Tumor
0.0
CPT0020120003
Tumor
0.0
CPT0001190001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0013790003
Normal
0.0
CPT0092160003
Tumor
0.0
CPT0088690003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0000790001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0063640001
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0001260009
Tumor
0.0
CPT0020020001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0088630003
Tumor
-0.1
CPT0012180003
Tumor
-0.1
CPT0012290003
Normal
-0.1
CPT0069000003
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0065450001
Normal
-0.1
CPT0089460004
Tumor
-0.1
CPT0006900003
Tumor
-0.1
CPT0064370003
Tumor
-0.1
CPT0088920001
Normal
-0.1
CPT0014450004
Tumor
-0.1
CPT0023360001
Normal
-0.1
CPT0075560003
Tumor
-0.1
CPT0009060003
Tumor
-0.1
CPT0086970003
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0065870003
Tumor
-0.1
CPT0079380003
Tumor
-0.1
CPT0086030003
Tumor
-0.1
CPT0026420001
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0085670003
Tumor
-0.1
CPT0014160003
Tumor
-0.1
CPT0001180009
Tumor
-0.1
CPT0065820001
Normal
-0.1
CPT0081600003
Tumor
-0.1
CPT0079230003
Tumor
-0.1
CPT0006730001
Normal
-0.1
CPT0065690003
Tumor
-0.1
CPT0078930003
Tumor
-0.1
CPT0077110003
Tumor
-0.2
CPT0025050003
Tumor
-0.2
CPT0007870001
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0063630003
Tumor
-0.2
CPT0023350003
Tumor
-0.2
CPT0012280003
Tumor
-0.2
CPT0065430003
Tumor
-0.2
CPT0077140001
Normal
-0.2
CPT0065810003
Tumor
-0.2
CPT0012670003
Tumor
-0.2
CPT0065750003
Tumor
-0.2
CPT0077310003
Tumor
-0.2
CPT0088480003
Tumor
-0.3
CPT0079410003
Tumor
-0.3
CPT0019990003
Tumor
-0.3
CPT0092740003
Normal
-0.3
CPT0001270001
Normal
-0.3
CPT0001500009
Tumor
-0.3
CPT0007320003
Tumor
-0.3
CPT0086360003
Tumor
-0.4
CPT0023690003
Tumor
-0.4
CPT0092790003
Tumor
-0.4
CPT0066470004
Tumor
-0.5
CPT0092290003
Tumor
-0.5
CPT0078510003
Tumor
-0.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
