HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:23.1 nTPM
HPA Brain:10.5 nTPM
GTEx:23.1 nTPM
FANTOM5:43.3 Scaled Tags Per Million
Pig:22.0 nTPM
Mouse:61.5 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA022931
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 10.5
Sample id Sample description nTPM
Hippocampus
nTPM: 8.9
1898 Male, age 80, left hemisphere 12.1
2529 Female, age 94, left hemisphere 10.0
1855 Male, age 76, left hemisphere 8.9
1911 Female, age 85, right hemisphere 8.3
2621 Female, age 67, right hemisphere 7.7
2148 Female, age 91, left hemisphere 6.4
Dentate gyrus
nTPM: 8.3
2010 Male, age 76, both hemispheres 10.5
1927 Female, age 91, both hemispheres 10.4
2528 Male, age 74, both hemispheres 8.8
2246 Female, age 85, both hemispheres 8.0
2530 Female, age 94, left hemisphere 7.7
2531 Female, age 67, both hemispheres 4.3
Entorhinal gyrus
nTPM: 6.2
2117 Female, age 91, right hemisphere 7.6
2613 Female, age 94, left hemisphere 7.0
1787 Male, age 76, left hemisphere 6.5
1938 Female, age 85, left hemisphere 6.1
2764 Male, age 80, right hemisphere 5.3
2686 Male, age 75, right hemisphere 4.7
Hippocampus, CA1
nTPM: 10.5
2749 Male, age 80, left hemisphere 15.5
2527 Male, age 74, both hemispheres 11.2
1873 Female, age 85, both hemispheres 9.8
2045 Male, age 76, both hemispheres 8.7
2082 Female, age 91, right hemisphere 7.5
Hippocampus, CA2
nTPM: 10.3
1963 Male, age 80, left hemisphere 14.7
1892 Male, age 76, both hemispheres 13.1
2249 Male, age 74, both hemispheres 10.9
1940 Female, age 85, left hemisphere 8.7
2437 Female, age 94, left hemisphere 7.5
2113 Female, age 91, right hemisphere 6.9
Hippocampus, CA3
nTPM: 9.4
2137 Male, age 80, left hemisphere 13.1
2436 Male, age 74, both hemispheres 11.3
1867 Male, age 76, both hemispheres 10.8
1891 Female, age 85, both hemispheres 9.2
2620 Female, age 94, left hemisphere 6.2
2861 Female, age 67, both hemispheres 5.8
Parahippocampal cortex
nTPM: 6.8
2250 Female, age 67, right hemisphere 9.1
1933 Female, age 85, both hemispheres 7.9
2245 Female, age 91, both hemispheres 7.2
2693 Female, age 94, both hemispheres 7.1
1990 Female, age 91, right hemisphere 7.0
1850 Male, age 80, both hemispheres 6.9
2018 Male, age 76, both hemispheres 5.8
2692 Male, age 74, both hemispheres 5.8
2622 Female, age 67, right hemisphere 5.5
2532 Female, age 72, left hemisphere 5.4
Perirhinal gyrus
nTPM: 8.1
1847 Female, age 91, left hemisphere 10.7
2521 Female, age 94, right hemisphere 9.0
1794 Male, age 80, right hemisphere 8.1
1841 Female, age 85, right hemisphere 8.0
2848 Male, age 76, right hemisphere 4.6
Subiculum
nTPM: 8.1
1901 Male, age 80, both hemispheres 10.1
1977 Female, age 85, both hemispheres 9.0
2729 Female, age 91, right hemisphere 8.7
2438 Female, age 94, left hemisphere 7.8
2042 Male, age 76, both hemispheres 7.0
2619 Male, age 74, both hemispheres 6.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 23.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.1
Samples: 197

Max nTPM: 56.9
Min nTPM: 8.1
Std nTPM: 7.8
Median nTPM: 21.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 56.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 43.2
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 41.6
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 41.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 40.8
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 40.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 39.1
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 38.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 38.3
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 37.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 37.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 43.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 43.3
FF:10169-103B7 60 years, female 57.1
FF:10153-102I9 76 years, female 29.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 22.0
Pig sample Sample description nTPM
Subiculum
nTPM: 20.1
Samples: 4

Max nTPM: 24.9
Min nTPM: 17.4
Sample A Female 24.9
Sample B Female 17.8
Sample C Male 17.4
Sample D Male 20.1
Dorsal hippocampus
nTPM: 22.0
Samples: 4

Max nTPM: 30.4
Min nTPM: 16.3
Sample A Female 30.4
Sample B Female 17.9
Sample C Male 23.3
Sample D Male 16.3
Entorhinal cortex
nTPM: 19.3
Samples: 4

Max nTPM: 21.7
Min nTPM: 16.4
Sample A Female 19.3
Sample B Female 19.8
Sample C Male 21.7
Sample D Male 16.4
Ventral hippocampus
nTPM: 18.2
Samples: 4

Max nTPM: 21.3
Min nTPM: 15.1
Sample A Female 21.3
Sample B Female 15.1
Sample C Male 17.4
Sample D Male 18.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 61.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 58.5
Samples: 4

Max nTPM: 63.2
Min nTPM: 49.6
Sample A Male 59.2
Sample B Male 63.2
Sample C Female 62.0
Sample D Female 49.6
Hippocampal formation
nTPM: 61.5
Samples: 4

Max nTPM: 66.0
Min nTPM: 55.6
Sample A Male 66.0
Sample B Male 55.6
Sample C Female 62.6
Sample D Female 61.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
75828179 Antisense, RP_060601_01_F03, Mouse strain C57BL/6J (56 days, male) 0.2

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