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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COPB1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
50.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
118.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
93.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
90.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
86.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
85.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
84.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
81.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
81.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
81.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
80.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
78.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
77.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
74.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
73.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
70.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
70.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
69.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
69.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
68.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
66.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
64.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
62.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
61.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
59.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
57.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
56.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
56.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
53.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
50.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
50.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
47.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
46.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
45.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
43.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
43.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
41.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
40.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
39.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
38.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
37.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
37.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
35.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
35.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
35.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
34.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
32.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
32.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
30.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
30.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
29.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
28.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
28.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
26.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
26.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
25.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
25.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
23.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
22.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
20.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
17.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
15.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
15.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
8.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COPB1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
54.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
202.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
144.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
137.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
134.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
131.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
120.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
120.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
113.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
111.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
107.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
103.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
101.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
99.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
98.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
96.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
95.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
93.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
92.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
92.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
91.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
90.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
90.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
89.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
89.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
89.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
88.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
87.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
87.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
86.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
86.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
86.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
86.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
85.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
85.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
85.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
84.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
84.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
83.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
83.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
83.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
83.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
83.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
82.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
81.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
81.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
81.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
81.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
81.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
80.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
80.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
80.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
79.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
79.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
79.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
79.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
78.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
78.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
78.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
78.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
78.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
77.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
77.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
77.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
77.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
77.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
77.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
76.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
76.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
76.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
76.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
76.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
76.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
76.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
76.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
76.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
75.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
75.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
75.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
75.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
75.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
74.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
74.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
74.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
74.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
74.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
74.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
74.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
73.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
73.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
73.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
73.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
73.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
73.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
73.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
73.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
73.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
73.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
73.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
73.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
72.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
72.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
72.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
72.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
71.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
71.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
71.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
71.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
70.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
70.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
70.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
70.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
70.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
70.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
69.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
69.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
69.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
69.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
69.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
69.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
68.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
68.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
68.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
68.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
68.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
68.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
68.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
68.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
67.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
67.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
67.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
67.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
67.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
66.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
66.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
66.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
66.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
66.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
66.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
66.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
66.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
66.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
66.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
65.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
65.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
65.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
65.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
65.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
65.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
65.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
65.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
65.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
65.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
64.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
64.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
64.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
64.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
64.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
64.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
64.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
64.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
64.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
64.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
64.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
64.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
64.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
63.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
63.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
63.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
63.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
63.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
62.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
62.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
62.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
62.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
62.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
62.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
62.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
62.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
62.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
62.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
62.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
62.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
61.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
61.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
61.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
61.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
61.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
61.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
61.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
61.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
61.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
61.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
61.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
61.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
61.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
61.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
60.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
60.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
60.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
60.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
60.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
60.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
60.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
59.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
59.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
59.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
59.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
59.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
59.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
59.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
59.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
58.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
58.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
58.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
58.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
58.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
58.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
58.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
57.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
57.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
57.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
57.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
57.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
57.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
57.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
57.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
57.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
57.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
57.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
56.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
56.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
56.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
56.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
56.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
56.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
56.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
56.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
56.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
56.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
56.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
56.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
56.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
56.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
55.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
55.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
55.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
55.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
55.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
55.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
55.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
55.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
55.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
55.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
55.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
55.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
55.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
55.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
54.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
54.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
54.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
54.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
54.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
54.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
54.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
54.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
54.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
54.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
54.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
54.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
54.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
54.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
53.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
53.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
53.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
53.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
53.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
53.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
52.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
52.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
52.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
52.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
52.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
52.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
52.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
52.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
52.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
52.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
52.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
52.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
51.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
51.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
51.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
51.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
51.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
50.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
50.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
50.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
50.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
49.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
49.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
49.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
49.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
49.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
49.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
49.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
49.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
49.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
49.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
49.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
49.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
48.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
48.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
48.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
48.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
48.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
48.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
48.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
48.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
47.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
47.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
47.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
47.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
47.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
47.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
47.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
47.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
47.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
47.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
47.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
47.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
47.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
47.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
47.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
46.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
46.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
46.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
46.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
46.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
46.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
46.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
45.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
45.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
45.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
45.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
45.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
45.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
45.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
45.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
45.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
44.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
44.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
44.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
44.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
44.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
44.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
44.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
44.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
44.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
44.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
43.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
43.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
43.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
43.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
43.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
43.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
43.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
43.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
42.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
42.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
42.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
42.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
41.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
41.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
41.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
41.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
41.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
41.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
40.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
40.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
40.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
40.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
40.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
40.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
40.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
40.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
40.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
40.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
39.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
39.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
39.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
39.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
38.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
38.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
38.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
38.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
38.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
37.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
37.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
37.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
37.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
37.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
37.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
37.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
37.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
37.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
37.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
37.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
37.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
36.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
36.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
36.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
36.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
36.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
36.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
36.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
36.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
35.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
35.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
35.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
35.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
35.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
35.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
35.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
35.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
34.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
34.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
33.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
33.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
33.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
33.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
33.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
33.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
33.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
33.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
32.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
32.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
32.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
32.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
32.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
31.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
31.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
31.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
31.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
30.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
30.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
30.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
30.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
30.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
29.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
29.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
28.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
28.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
28.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
27.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
27.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
27.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
27.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
27.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
27.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
26.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
26.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
25.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
25.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
24.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
24.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
24.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
24.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
24.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
24.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
24.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
24.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
24.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
24.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
24.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
24.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
23.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
23.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
23.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
23.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
23.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
23.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
23.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
22.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
22.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
22.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
22.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
22.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
22.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
22.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
22.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
21.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
21.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
21.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
21.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
20.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
20.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
20.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
20.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
19.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
19.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
19.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
18.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
18.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
17.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
17.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
17.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
17.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
17.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
16.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
16.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
15.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
15.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
14.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
14.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
13.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
13.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
13.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
12.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
11.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
11.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COPB1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
68.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
107.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
106.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
105.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
103.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
102.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
101.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
100.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
100.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
98.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
94.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
92.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
90.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
90.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
87.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
87.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
85.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
84.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
83.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
82.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
82.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
82.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
81.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
81.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
80.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
80.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
79.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
78.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
78.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
77.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
76.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
76.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
76.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
76.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
74.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
73.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
73.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
73.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
72.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
72.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
72.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
71.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
71.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
70.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
70.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
70.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
69.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
69.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
69.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
68.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
68.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
68.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
68.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
67.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
66.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
64.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
64.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
63.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
63.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
63.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
63.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
63.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
63.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
62.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
61.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
61.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
61.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
60.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
60.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
60.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
59.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
59.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
59.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
57.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
57.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
57.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
57.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
56.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
55.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
55.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
54.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
54.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
54.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
53.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
52.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
52.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
50.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
50.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
49.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
48.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
48.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
48.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
45.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
45.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
45.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
42.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
38.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
36.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
34.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
32.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COPB1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
130.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
127.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
121.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
102.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
95.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
93.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
85.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
85.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
80.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
80.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
80.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
76.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
73.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
73.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
73.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
73.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
72.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
72.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
71.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
70.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
70.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
70.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
70.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
69.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
69.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
68.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
67.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
65.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
63.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
62.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
62.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
62.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
62.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
62.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
62.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
61.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
60.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
60.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
59.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
59.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
59.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
58.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
58.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
57.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
57.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
57.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
56.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
55.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
55.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
55.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
54.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
54.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
54.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
54.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
53.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
52.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
51.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
51.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
51.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
51.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
50.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
50.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
50.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
49.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
49.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
49.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
49.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
49.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
49.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
49.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
48.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
48.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
48.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
47.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
47.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
47.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
47.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
47.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
46.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
46.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
46.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
46.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
46.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
45.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
45.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
45.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
44.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
44.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
44.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
44.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
44.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
43.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
43.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
43.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
43.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
43.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
42.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
42.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
42.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
42.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
41.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
41.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
40.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
40.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
40.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
40.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
40.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
40.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
39.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
39.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
39.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
39.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
39.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
39.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
38.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
38.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
38.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
38.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
38.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
38.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
38.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
38.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
38.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
37.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
37.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
37.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
37.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
36.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
36.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
36.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
36.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
36.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
36.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
36.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
35.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
35.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
35.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
35.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
35.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
35.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
35.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
34.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
34.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
34.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
34.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
34.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
34.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
34.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
33.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
33.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
33.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
33.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
33.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
33.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
32.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
31.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
31.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
31.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
31.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
31.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
31.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
31.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
31.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
31.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
31.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
31.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
31.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
30.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
30.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
30.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
30.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
30.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
30.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
29.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
29.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
29.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
29.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
28.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
28.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
28.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
28.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
28.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
27.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
27.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
27.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
27.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
26.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
26.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
26.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
26.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
26.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
26.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
26.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
26.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
25.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
25.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
25.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
24.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
24.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
24.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
24.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
24.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
24.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
24.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
23.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
23.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
23.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
23.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
23.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
23.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
23.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
23.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
23.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
23.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
23.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
23.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
22.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
22.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
22.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
22.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
21.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
21.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
21.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
20.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
20.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
20.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
20.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
20.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
20.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
20.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
20.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
19.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
19.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
19.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
19.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
19.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
18.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
18.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
18.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
18.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
17.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
17.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
17.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
17.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
16.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
16.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
16.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
16.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
16.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
15.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
15.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
15.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
14.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
14.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
14.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
14.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
14.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
14.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
14.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
14.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
14.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
13.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
13.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
13.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
13.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
12.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
12.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
12.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
11.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
11.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
11.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
11.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
10.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
10.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
9.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
9.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
6.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
6.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
6.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
5.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
4.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
2.7
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001180009
Tumor
0.6
CPT0078800003
Tumor
0.6
CPT0012180003
Tumor
0.6
CPT0088550004
Tumor
0.5
CPT0001340003
Tumor
0.5
CPT0086820003
Tumor
0.4
CPT0015730003
Tumor
0.4
CPT0079180003
Tumor
0.4
CPT0012280003
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0023350003
Tumor
0.3
CPT0002270011
Tumor
0.3
CPT0012550003
Tumor
0.3
CPT0076330003
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0007320003
Tumor
0.3
CPT0069160003
Tumor
0.2
CPT0078660003
Tumor
0.2
CPT0081880003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0002350011
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0025110003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0017450001
Normal
0.2
CPT0078990003
Tumor
0.1
CPT0017850003
Tumor
0.1
CPT0085670003
Tumor
0.1
CPT0078510003
Tumor
0.1
CPT0078830003
Tumor
0.1
CPT0026420001
Normal
0.1
CPT0076350001
Normal
0.1
CPT0086360003
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0066430001
Normal
0.1
CPT0065870003
Tumor
0.1
CPT0009060003
Tumor
0.1
CPT0086950003
Tumor
0.1
CPT0084560003
Tumor
0.1
CPT0009080003
Normal
0.1
CPT0077140001
Normal
0.1
CPT0017410003
Tumor
0.1
CPT0088920001
Normal
0.1
CPT0078930003
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0006530001
Normal
0.1
CPT0079430001
Normal
0.1
CPT0092800003
Normal
0.1
CPT0023710001
Normal
0.1
CPT0025880003
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0000890001
Normal
0.1
CPT0026410003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0012080003
Tumor
0.1
CPT0092740003
Normal
0.1
CPT0092310003
Normal
0.1
CPT0012090003
Normal
0.1
CPT0012370003
Tumor
0.1
CPT0000790001
Normal
0.1
CPT0001270001
Normal
0.1
CPT0069000003
Tumor
0.1
CPT0075570001
Normal
0.1
CPT0025060001
Normal
0.1
CPT0014370004
Tumor
0.0
CPT0078840001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0066470004
Tumor
0.0
CPT0065750003
Tumor
0.0
CPT0001190001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0006730001
Normal
0.0
CPT0065450001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0081990003
Tumor
0.0
CPT0012770003
Normal
0.0
CPT0077310003
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0064370003
Tumor
0.0
CPT0012570003
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0006950001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0012640003
Normal
0.0
CPT0000870016
Tumor
0.0
CPT0092290003
Tumor
0.0
CPT0010170001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0025050003
Tumor
0.0
CPT0025610001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0012920003
Normal
0.0
CPT0075130003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0084590001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0001230001
Normal
0.0
CPT0065430003
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0007860003
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0009020003
Normal
0.0
CPT0092190003
Normal
0.0
CPT0023360001
Normal
0.0
CPT0079380003
Tumor
0.0
CPT0086030003
Tumor
0.0
CPT0001500009
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0087050003
Normal
0.0
CPT0088630003
Tumor
0.0
CPT0089480003
Normal
0.0
CPT0088710001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0019130003
Tumor
0.0
CPT0082010001
Normal
0.0
CPT0021240003
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0077320001
Normal
0.0
CPT0025290003
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0025580004
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0079000001
Normal
0.0
CPT0012900004
Tumor
0.0
CPT0025920001
Normal
-0.1
CPT0023690003
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0006440003
Tumor
-0.1
CPT0088640003
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0009000003
Tumor
-0.1
CPT0006900003
Tumor
-0.1
CPT0006630003
Tumor
-0.1
CPT0066520001
Normal
-0.1
CPT0015810003
Tumor
-0.1
CPT0063330001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0063320003
Tumor
-0.1
CPT0065690003
Tumor
-0.1
CPT0014470001
Normal
-0.1
CPT0092730003
Tumor
-0.1
CPT0079410003
Tumor
-0.1
CPT0089460004
Tumor
-0.1
CPT0024680001
Normal
-0.1
CPT0079300001
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0002370001
Normal
-0.1
CPT0025350003
Tumor
-0.1
CPT0063630003
Tumor
-0.1
CPT0010160003
Tumor
-0.1
CPT0088760003
Tumor
-0.1
CPT0087040003
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0011240003
Tumor
-0.1
CPT0079480003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0071150004
Tumor
-0.1
CPT0092790003
Tumor
-0.1
CPT0000640003
Tumor
-0.1
CPT0025170003
Tumor
-0.2
CPT0010120001
Normal
-0.2
CPT0079510001
Normal
-0.2
CPT0088970003
Tumor
-0.2
CPT0077490003
Tumor
-0.2
CPT0089020003
Tumor
-0.2
CPT0000780007
Tumor
-0.3
CPT0078530001
Normal
-0.3
CPT0088900003
Tumor
-0.3
CPT0065930003
Tumor
-0.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
