HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:36.4 nTPM
HPA Brain:76.6 nTPM
GTEx:36.4 nTPM
FANTOM5:22.8 Scaled Tags Per Million
Pig:102.2 nTPM
Mouse:32.2 nTPM
Allen mouse:5.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003011
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 76.6
Sample id Sample description nTPM
Hippocampus
nTPM: 72.5
2621 Female, age 67, right hemisphere 84.1
1898 Male, age 80, left hemisphere 81.1
2148 Female, age 91, left hemisphere 71.4
1855 Male, age 76, left hemisphere 68.8
2529 Female, age 94, left hemisphere 65.7
1911 Female, age 85, right hemisphere 63.9
Dentate gyrus
nTPM: 70.0
2530 Female, age 94, left hemisphere 80.3
2531 Female, age 67, both hemispheres 76.4
2010 Male, age 76, both hemispheres 74.8
1927 Female, age 91, both hemispheres 70.5
2246 Female, age 85, both hemispheres 59.0
2528 Male, age 74, both hemispheres 59.0
Entorhinal gyrus
nTPM: 76.6
2613 Female, age 94, left hemisphere 88.5
2764 Male, age 80, right hemisphere 83.3
1787 Male, age 76, left hemisphere 77.8
2686 Male, age 75, right hemisphere 73.1
1938 Female, age 85, left hemisphere 72.6
2117 Female, age 91, right hemisphere 64.3
Hippocampus, CA1
nTPM: 73.9
2749 Male, age 80, left hemisphere 114.5
1873 Female, age 85, both hemispheres 66.5
2527 Male, age 74, both hemispheres 66.5
2045 Male, age 76, both hemispheres 63.3
2082 Female, age 91, right hemisphere 59.0
Hippocampus, CA2
nTPM: 70.7
1963 Male, age 80, left hemisphere 99.1
1892 Male, age 76, both hemispheres 76.4
2437 Female, age 94, left hemisphere 69.0
2249 Male, age 74, both hemispheres 65.2
2113 Female, age 91, right hemisphere 59.6
1940 Female, age 85, left hemisphere 55.0
Hippocampus, CA3
nTPM: 74.2
2137 Male, age 80, left hemisphere 92.7
2861 Female, age 67, both hemispheres 85.9
2620 Female, age 94, left hemisphere 73.5
2436 Male, age 74, both hemispheres 73.1
1867 Male, age 76, both hemispheres 62.8
1891 Female, age 85, both hemispheres 57.4
Parahippocampal cortex
nTPM: 69.1
2245 Female, age 91, both hemispheres 78.9
2532 Female, age 72, left hemisphere 77.0
1933 Female, age 85, both hemispheres 73.0
2693 Female, age 94, both hemispheres 71.9
1850 Male, age 80, both hemispheres 71.4
2622 Female, age 67, right hemisphere 71.1
1990 Female, age 91, right hemisphere 63.7
2018 Male, age 76, both hemispheres 61.8
2250 Female, age 67, right hemisphere 61.8
2692 Male, age 74, both hemispheres 60.2
Perirhinal gyrus
nTPM: 76.6
2521 Female, age 94, right hemisphere 83.7
1847 Female, age 91, left hemisphere 82.7
1794 Male, age 80, right hemisphere 79.1
2848 Male, age 76, right hemisphere 74.1
1841 Female, age 85, right hemisphere 63.2
Subiculum
nTPM: 66.1
1977 Female, age 85, both hemispheres 74.2
1901 Male, age 80, both hemispheres 72.5
2438 Female, age 94, left hemisphere 71.3
2042 Male, age 76, both hemispheres 66.4
2619 Male, age 74, both hemispheres 58.8
2729 Female, age 91, right hemisphere 53.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 36.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.4
Samples: 197

Max nTPM: 66.8
Min nTPM: 4.3
Std nTPM: 8.9
Median nTPM: 36.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 66.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 55.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 55.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 54.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 54.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 53.7
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 53.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 52.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 52.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 51.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 51.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 22.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.8
FF:10169-103B7 60 years, female 29.0
FF:10153-102I9 76 years, female 16.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 102.2
Pig sample Sample description nTPM
Subiculum
nTPM: 86.9
Samples: 4

Max nTPM: 110.8
Min nTPM: 74.9
Sample A Female 110.8
Sample B Female 83.0
Sample C Male 78.7
Sample D Male 74.9
Dorsal hippocampus
nTPM: 102.2
Samples: 4

Max nTPM: 129.9
Min nTPM: 68.3
Sample A Female 129.9
Sample B Female 106.6
Sample C Male 103.8
Sample D Male 68.3
Entorhinal cortex
nTPM: 90.5
Samples: 4

Max nTPM: 93.7
Min nTPM: 88.3
Sample A Female 91.1
Sample B Female 89.0
Sample C Male 93.7
Sample D Male 88.3
Ventral hippocampus
nTPM: 89.2
Samples: 4

Max nTPM: 113.1
Min nTPM: 61.7
Sample A Female 80.6
Sample B Female 61.7
Sample C Male 101.5
Sample D Male 113.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 32.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.2
Samples: 4

Max nTPM: 35.3
Min nTPM: 27.3
Sample A Male 32.0
Sample B Male 35.3
Sample C Female 27.3
Sample D Female 34.0
Hippocampal formation
nTPM: 27.1
Samples: 4

Max nTPM: 28.7
Min nTPM: 25.2
Sample A Male 25.2
Sample B Male 28.7
Sample C Female 26.9
Sample D Female 27.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 5.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.2
1730 Antisense, RP_040526_01_G03, Mouse strain C57BL/6J (56 days, male) 5.2
1731 Antisense, RP_040526_01_G03, Mouse strain C57BL/6J (56 days, male) 0.2

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