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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GAL3ST1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
76.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
55.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
34.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
31.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
28.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
24.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
23.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
21.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
17.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
15.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
15.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
15.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
14.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
14.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
14.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
14.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
14.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
13.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
12.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
12.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
11.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
10.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
10.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
10.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
9.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
9.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
9.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
8.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
8.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
7.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
7.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
7.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
7.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
7.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
6.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
6.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
5.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
5.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
5.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
5.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
4.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
4.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
4.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
4.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
4.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
3.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
3.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
3.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
3.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
3.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
2.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
2.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
2.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
2.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
2.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
1.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
0.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GAL3ST1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
149.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
557.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
547.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
526.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
508.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
487.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
472.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
409.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
407.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
404.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
401.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
398.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
395.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
393.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
373.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
369.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
368.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
364.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
363.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
359.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
358.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
357.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
356.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
350.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
346.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
337.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
333.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
332.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
331.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
324.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
324.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
323.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
319.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
316.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
314.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
313.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
312.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
307.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
306.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
304.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
304.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
302.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
298.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
294.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
293.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
292.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
288.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
286.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
285.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
283.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
281.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
280.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
279.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
278.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
277.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
276.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
274.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
271.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
270.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
267.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
262.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
261.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
261.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
260.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
260.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
260.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
260.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
260.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
258.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
258.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
257.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
255.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
255.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
253.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
251.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
251.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
247.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
247.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
247.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
245.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
243.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
242.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
241.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
238.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
238.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
237.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
237.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
236.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
236.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
235.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
235.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
234.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
234.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
232.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
232.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
231.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
231.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
231.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
230.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
229.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
229.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
229.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
227.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
227.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
226.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
226.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
225.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
224.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
224.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
223.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
223.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
223.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
222.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
221.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
219.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
219.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
219.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
218.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
215.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
213.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
212.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
211.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
210.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
210.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
209.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
208.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
208.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
207.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
206.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
206.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
205.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
204.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
203.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
202.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
201.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
201.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
201.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
200.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
198.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
198.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
198.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
197.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
197.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
196.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
196.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
195.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
195.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
193.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
193.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
191.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
189.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
188.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
188.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
187.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
185.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
185.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
185.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
184.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
184.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
184.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
183.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
183.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
183.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
181.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
181.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
180.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
180.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
180.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
180.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
180.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
180.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
179.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
178.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
178.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
178.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
175.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
175.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
175.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
175.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
174.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
174.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
173.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
173.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
172.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
172.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
172.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
172.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
172.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
171.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
171.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
170.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
170.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
170.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
169.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
169.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
169.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
167.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
166.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
165.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
163.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
163.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
163.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
161.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
160.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
160.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
160.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
160.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
159.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
159.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
158.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
158.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
157.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
157.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
157.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
157.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
156.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
156.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
156.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
155.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
154.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
154.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
153.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
153.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
153.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
152.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
152.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
151.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
151.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
150.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
150.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
150.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
150.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
149.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
149.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
149.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
149.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
148.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
148.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
148.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
148.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
148.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
147.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
147.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
147.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
147.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
146.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
146.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
146.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
143.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
143.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
142.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
142.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
141.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
141.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
141.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
140.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
139.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
139.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
137.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
137.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
136.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
136.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
136.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
136.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
136.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
136.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
135.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
135.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
135.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
135.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
133.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
133.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
133.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
132.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
132.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
132.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
132.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
132.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
131.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
131.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
131.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
130.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
130.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
129.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
128.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
128.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
128.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
127.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
127.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
126.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
126.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
126.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
125.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
125.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
125.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
125.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
125.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
124.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
123.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
123.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
122.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
121.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
121.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
119.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
119.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
118.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
118.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
117.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
117.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
117.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
116.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
116.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
116.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
116.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
115.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
114.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
113.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
111.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
111.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
111.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
110.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
109.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
108.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
108.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
108.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
108.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
107.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
107.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
107.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
106.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
105.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
105.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
105.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
104.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
104.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
104.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
104.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
103.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
102.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
102.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
102.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
102.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
101.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
101.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
99.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
99.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
99.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
98.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
96.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
96.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
96.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
94.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
94.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
93.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
93.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
93.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
92.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
92.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
92.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
91.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
90.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
90.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
90.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
89.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
89.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
88.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
88.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
87.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
87.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
87.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
86.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
86.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
86.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
85.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
85.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
84.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
84.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
83.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
83.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
83.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
83.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
82.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
82.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
80.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
80.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
79.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
79.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
78.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
77.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
77.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
77.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
76.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
76.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
76.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
75.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
75.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
75.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
75.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
74.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
74.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
73.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
73.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
73.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
72.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
72.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
72.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
71.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
69.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
69.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
68.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
68.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
68.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
67.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
67.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
67.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
67.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
65.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
65.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
65.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
64.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
64.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
63.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
63.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
63.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
63.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
62.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
62.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
62.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
62.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
61.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
61.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
58.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
56.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
56.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
54.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
53.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
53.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
53.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
51.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
51.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
51.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
51.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
49.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
49.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
48.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
47.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
46.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
46.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
45.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
43.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
42.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
41.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
41.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
41.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
39.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
36.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
36.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
36.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
35.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
34.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
34.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
33.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
32.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
31.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
30.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
30.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
30.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
29.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
29.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
27.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
27.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
26.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
25.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
25.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
25.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
24.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
24.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
22.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
20.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
20.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
17.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
16.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
14.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
14.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
13.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
13.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
13.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
12.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
12.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
11.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
10.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
10.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
9.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
8.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
8.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
8.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
8.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
8.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
7.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
6.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
6.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
5.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
5.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
4.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
4.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
3.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
3.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
3.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
3.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
3.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
2.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
2.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
2.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
1.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
1.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
1.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
1.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
0.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
0.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GAL3ST1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
172.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
523.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
503.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
398.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
393.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
385.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
385.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
378.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
365.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
347.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
346.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
317.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
304.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
298.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
290.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
281.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
281.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
272.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
265.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
255.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
234.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
228.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
226.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
218.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
218.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
216.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
215.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
202.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
201.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
200.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
197.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
196.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
193.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
192.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
192.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
189.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
189.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
188.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
185.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
184.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
181.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
181.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
181.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
179.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
175.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
174.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
168.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
167.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
164.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
164.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
160.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
159.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
153.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
153.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
152.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
150.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
148.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
148.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
148.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
147.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
145.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
145.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
144.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
141.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
134.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
133.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
133.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
128.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
128.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
128.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
127.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
125.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
113.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
105.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
104.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
103.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
102.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
99.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
96.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
88.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
83.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
81.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
76.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
73.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
71.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
70.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
68.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
58.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
46.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
44.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
43.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
41.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
38.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
37.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
22.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
20.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
19.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
14.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GAL3ST1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
50.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
752.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
361.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
297.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
256.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
225.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
216.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
195.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
179.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
163.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
160.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
150.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
149.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
140.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
138.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
137.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
132.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
120.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
118.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
115.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
111.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
110.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
108.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
105.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
96.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
93.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
89.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
88.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
88.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
87.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
87.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
86.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
84.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
83.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
81.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
78.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
77.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
77.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
76.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
75.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
75.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
75.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
74.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
73.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
73.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
72.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
71.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
69.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
67.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
66.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
66.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
65.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
65.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
65.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
64.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
64.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
63.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
63.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
63.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
62.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
62.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
61.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
61.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
61.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
60.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
60.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
59.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
58.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
58.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
58.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
57.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
57.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
57.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
56.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
55.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
55.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
55.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
55.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
55.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
55.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
54.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
54.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
54.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
54.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
53.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
53.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
53.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
52.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
52.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
52.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
52.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
52.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
52.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
51.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
51.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
50.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
50.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
50.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
50.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
49.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
48.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
48.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
47.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
47.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
47.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
47.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
47.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
47.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
45.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
44.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
44.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
44.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
44.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
44.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
43.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
43.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
43.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
43.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
42.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
42.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
42.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
42.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
42.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
42.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
41.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
41.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
41.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
40.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
40.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
40.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
40.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
40.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
39.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
39.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
39.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
39.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
39.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
38.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
37.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
37.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
37.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
36.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
36.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
36.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
36.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
36.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
36.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
36.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
36.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
36.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
36.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
35.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
35.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
34.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
34.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
34.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
34.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
33.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
33.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
33.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
33.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
33.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
33.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
32.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
32.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
32.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
32.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
32.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
32.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
32.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
32.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
31.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
31.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
31.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
30.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
30.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
30.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
30.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
30.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
30.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
29.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
29.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
29.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
29.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
29.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
28.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
27.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
27.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
27.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
27.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
27.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
26.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
26.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
26.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
26.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
26.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
25.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
25.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
25.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
25.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
25.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
24.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
24.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
24.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
24.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
24.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
24.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
24.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
24.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
24.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
23.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
23.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
23.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
23.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
23.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
22.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
22.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
22.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
21.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
21.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
21.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
21.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
20.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
20.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
20.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
20.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
20.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
20.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
19.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
19.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
19.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
18.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
18.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
18.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
17.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
17.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
17.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
17.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
17.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
17.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
16.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
16.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
16.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
16.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
16.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
15.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
15.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
15.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
15.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
15.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
15.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
14.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
13.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
12.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
12.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
11.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
10.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
10.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
10.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
9.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
9.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
9.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
9.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
8.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
8.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
8.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
7.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
7.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
7.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
6.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
6.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
6.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
6.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
5.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
4.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
4.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
4.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
3.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
0.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
0.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0084560003
Tumor
3.5
CPT0069160003
Tumor
1.4
CPT0012180003
Tumor
1.3
CPT0023350003
Tumor
1.2
CPT0069000003
Tumor
1.2
CPT0063630003
Tumor
1.2
CPT0012550003
Tumor
1.1
CPT0009080003
Normal
1.0
CPT0081880003
Tumor
0.9
CPT0011410003
Tumor
0.8
CPT0020120003
Tumor
0.8
CPT0007320003
Tumor
0.7
CPT0002350011
Tumor
0.7
CPT0014160003
Tumor
0.7
CPT0010110003
Tumor
0.6
CPT0012280003
Tumor
0.6
CPT0076330003
Tumor
0.5
CPT0006730001
Normal
0.5
CPT0086360003
Tumor
0.5
CPT0065750003
Tumor
0.5
CPT0012290003
Normal
0.5
CPT0088480003
Tumor
0.5
CPT0012570003
Normal
0.4
CPT0077140001
Normal
0.4
CPT0077310003
Tumor
0.4
CPT0025060001
Normal
0.4
CPT0086820003
Tumor
0.4
CPT0015730003
Tumor
0.4
CPT0078530001
Normal
0.4
CPT0079230003
Tumor
0.4
CPT0065870003
Tumor
0.4
CPT0025050003
Tumor
0.4
CPT0015910003
Tumor
0.4
CPT0079480003
Tumor
0.3
CPT0009060003
Tumor
0.3
CPT0075130003
Tumor
0.3
CPT0092290003
Tumor
0.3
CPT0081990003
Tumor
0.3
CPT0014450004
Tumor
0.3
CPT0088500001
Normal
0.3
CPT0015810003
Tumor
0.3
CPT0001220008
Tumor
0.3
CPT0092800003
Normal
0.3
CPT0020020001
Normal
0.3
CPT0088690003
Tumor
0.3
CPT0012900004
Tumor
0.3
CPT0006530001
Normal
0.3
CPT0086970003
Normal
0.3
CPT0019990003
Tumor
0.3
CPT0007860003
Tumor
0.3
CPT0000890001
Normal
0.3
CPT0082010001
Normal
0.3
CPT0075560003
Tumor
0.2
CPT0006950001
Normal
0.2
CPT0078670001
Normal
0.2
CPT0088570001
Normal
0.2
CPT0088780001
Normal
0.2
CPT0078940001
Normal
0.1
CPT0001180009
Tumor
0.1
CPT0065810003
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0076350001
Normal
0.1
CPT0025290003
Tumor
0.1
CPT0077110003
Tumor
0.1
CPT0087050003
Normal
0.1
CPT0025350003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0079270003
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0088920001
Normal
0.0
CPT0092310003
Normal
0.0
CPT0012090003
Normal
0.0
CPT0009020003
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0025920001
Normal
0.0
CPT0071150004
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0000790001
Normal
0.0
CPT0092160003
Tumor
0.0
CPT0065430003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0001260009
Tumor
-0.1
CPT0025580004
Tumor
-0.1
CPT0001340003
Tumor
-0.1
CPT0020130001
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0000640003
Tumor
-0.1
CPT0000870016
Tumor
-0.1
CPT0010170001
Normal
-0.1
CPT0001540009
Tumor
-0.1
CPT0012920003
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0092740003
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0012670003
Tumor
-0.1
CPT0023710001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0077320001
Normal
-0.1
CPT0001500009
Tumor
-0.1
CPT0085670003
Tumor
-0.1
CPT0006630003
Tumor
-0.1
CPT0014350001
Normal
-0.2
CPT0086370003
Normal
-0.2
CPT0063640001
Normal
-0.2
CPT0021240003
Tumor
-0.2
CPT0069010001
Normal
-0.2
CPT0025170003
Tumor
-0.2
CPT0088760003
Tumor
-0.2
CPT0019160001
Normal
-0.2
CPT0065450001
Normal
-0.2
CPT0064400001
Normal
-0.2
CPT0024670003
Tumor
-0.2
CPT0079000001
Normal
-0.2
CPT0089040001
Normal
-0.3
CPT0075570001
Normal
-0.3
CPT0078930003
Tumor
-0.3
CPT0017450001
Normal
-0.3
CPT0025110003
Tumor
-0.3
CPT0001510001
Normal
-0.3
CPT0069190001
Normal
-0.3
CPT0079430001
Normal
-0.3
CPT0001230001
Normal
-0.3
CPT0001550001
Normal
-0.3
CPT0002370001
Normal
-0.3
CPT0088710001
Normal
-0.3
CPT0006900003
Tumor
-0.3
CPT0084590001
Normal
-0.3
CPT0079510001
Normal
-0.3
CPT0078840001
Normal
-0.3
CPT0014470001
Normal
-0.3
CPT0017410003
Tumor
-0.3
CPT0000660001
Normal
-0.3
CPT0063330001
Normal
-0.3
CPT0014130001
Normal
-0.3
CPT0064370003
Tumor
-0.4
CPT0081600003
Tumor
-0.4
CPT0007870001
Normal
-0.4
CPT0010120001
Normal
-0.4
CPT0018250001
Normal
-0.4
CPT0009000003
Tumor
-0.4
CPT0014370004
Tumor
-0.4
CPT0086870003
Tumor
-0.4
CPT0023690003
Tumor
-0.4
CPT0023360001
Normal
-0.4
CPT0092790003
Tumor
-0.4
CPT0088640003
Normal
-0.5
CPT0006440003
Tumor
-0.5
CPT0066480003
Tumor
-0.5
CPT0025230003
Tumor
-0.5
CPT0089020003
Tumor
-0.5
CPT0087040003
Tumor
-0.5
CPT0025880003
Tumor
-0.5
CPT0007470001
Normal
-0.5
CPT0077490003
Tumor
-0.5
CPT0092730003
Tumor
-0.5
CPT0089480003
Normal
-0.5
CPT0086030003
Tumor
-0.5
CPT0012370003
Tumor
-0.5
CPT0019130003
Tumor
-0.6
CPT0086830003
Normal
-0.6
CPT0066470004
Tumor
-0.6
CPT0079300001
Normal
-0.6
CPT0065930003
Tumor
-0.6
CPT0086950003
Tumor
-0.6
CPT0078510003
Tumor
-0.6
CPT0010160003
Tumor
-0.6
CPT0079380003
Tumor
-0.6
CPT0078990003
Tumor
-0.7
CPT0066430001
Normal
-0.7
CPT0078800003
Tumor
-0.7
CPT0066520001
Normal
-0.8
CPT0011240003
Tumor
-0.8
CPT0012640003
Normal
-0.8
CPT0089460004
Tumor
-0.8
CPT0075720003
Tumor
-0.8
CPT0001270001
Normal
-0.9
CPT0002270011
Tumor
-0.9
CPT0065690003
Tumor
-0.9
CPT0075170001
Normal
-0.9
CPT0012080003
Tumor
-1.0
CPT0026410003
Tumor
-1.0
CPT0088900003
Tumor
-1.1
CPT0000780007
Tumor
-1.1
CPT0024680001
Normal
-1.1
CPT0092190003
Normal
-1.1
CPT0088630003
Tumor
-1.2
CPT0017850003
Tumor
-1.2
CPT0078660003
Tumor
-1.3
CPT0088550004
Tumor
-1.7
CPT0079180003
Tumor
-1.7
CPT0088970003
Tumor
-1.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
