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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SRD5A3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
3.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
22.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
15.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
10.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
9.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
9.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
9.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
7.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
7.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
7.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
7.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
6.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
6.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
6.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
5.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
5.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
5.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
5.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
5.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
4.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
4.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
4.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
4.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
3.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
3.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
3.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
3.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
3.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
3.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
2.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
2.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
2.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
2.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
2.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
2.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
2.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
2.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
1.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
1.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
1.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
1.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
1.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
1.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
1.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
1.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
1.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
1.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
1.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
1.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
1.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
1.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SRD5A3 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
42.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
38.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
35.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
35.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
34.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
33.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
32.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
32.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
31.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
31.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
31.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
30.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
30.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
29.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
29.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
29.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
29.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
28.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
28.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
28.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
28.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
27.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
27.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
27.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
27.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
27.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
26.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
26.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
26.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
26.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
26.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
26.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
26.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
25.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
24.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
24.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
24.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
24.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
24.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
24.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
24.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
23.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
23.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
23.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
23.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
23.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
23.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
23.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
23.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
22.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
22.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
22.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
22.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
22.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
22.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
21.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
21.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
21.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
21.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
21.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
20.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
20.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
20.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
20.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
20.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
20.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
20.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
20.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
20.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
20.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
20.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
20.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
20.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
20.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
20.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
20.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
20.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
19.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
19.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
19.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
19.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
19.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
19.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
19.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
19.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
19.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
19.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
19.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
19.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
19.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
19.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
19.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
19.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
19.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
19.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
18.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
18.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
18.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
18.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
18.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
18.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
18.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
18.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
18.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
18.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
18.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
18.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
18.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
18.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
18.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
18.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
18.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
18.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
18.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
18.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
18.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
18.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
18.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
18.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
17.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
17.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
17.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
17.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
17.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
17.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
17.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
17.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
17.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
17.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
17.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
17.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
17.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
17.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
17.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
17.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
17.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
17.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
17.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
17.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
17.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
17.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
17.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
17.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
17.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
17.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
16.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
16.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
16.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
16.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
16.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
16.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
16.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
16.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
16.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
16.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
16.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
16.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
16.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
16.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
16.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
16.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
16.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
16.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
16.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
16.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
16.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
16.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
16.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
16.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
16.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
16.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
16.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
16.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
16.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
16.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
16.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
16.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
16.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
16.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
16.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
16.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
16.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
16.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
16.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
16.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
15.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
15.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
15.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
15.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
15.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
15.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
15.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
15.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
15.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
15.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
15.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
15.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
15.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
15.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
15.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
15.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
15.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
15.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
15.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
15.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
15.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
15.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
15.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
15.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
15.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
15.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
15.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
15.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
15.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
15.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
15.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
15.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
15.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
15.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
15.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
15.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
15.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
15.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
15.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
14.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
14.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
14.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
14.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
14.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
14.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
14.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
14.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
14.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
14.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
14.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
14.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
14.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
14.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
14.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
14.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
14.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
14.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
14.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
14.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
14.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
14.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
14.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
14.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
14.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
14.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
14.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
14.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
14.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
14.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
14.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
14.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
14.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
14.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
14.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
14.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
13.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
13.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
13.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
13.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
13.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
13.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
13.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
13.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
13.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
13.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
13.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
13.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
13.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
13.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
13.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
13.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
13.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
13.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
13.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
13.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
13.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
13.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
13.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
13.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
13.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
13.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
13.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
13.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
13.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
13.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
13.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
13.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
13.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
13.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
13.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
13.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
13.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
12.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
12.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
12.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
12.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
12.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
12.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
12.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
12.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
12.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
12.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
12.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
12.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
12.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
12.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
12.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
12.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
12.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
12.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
12.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
12.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
12.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
12.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
12.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
12.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
12.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
12.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
12.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
12.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
12.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
12.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
12.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
12.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
12.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
12.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
12.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
12.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
12.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
12.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
12.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
12.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
12.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
12.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
12.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
12.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
12.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
12.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
12.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
12.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
12.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
11.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
11.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
11.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
11.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
11.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
11.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
11.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
11.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
11.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
11.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
11.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
11.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
11.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
11.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
11.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
11.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
11.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
11.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
11.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
11.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
11.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
11.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
11.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
11.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
11.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
11.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
11.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
11.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
11.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
11.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
11.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
11.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
11.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
11.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
11.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
11.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
10.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
10.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
10.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
10.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
10.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
10.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
10.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
10.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
10.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
10.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
10.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
10.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
10.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
10.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
10.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
10.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
10.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
10.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
10.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
10.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
10.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
10.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
10.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
10.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
10.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
10.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
10.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
10.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
10.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
10.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
10.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
10.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
10.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
10.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
10.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
10.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
10.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
10.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
9.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
9.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
9.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
9.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
9.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
9.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
9.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
9.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
9.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
9.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
9.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
9.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
9.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
9.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
9.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
9.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
9.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
9.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
9.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
9.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
9.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
9.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
9.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
9.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
9.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
9.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
9.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
9.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
9.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
9.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
8.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
8.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
8.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
8.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
8.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
8.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
8.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
8.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
8.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
8.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
8.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
8.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
8.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
8.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
7.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
7.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
7.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
7.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
7.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
7.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
7.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
7.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
7.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
7.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
7.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
7.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
7.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
7.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
7.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
7.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
7.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
7.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
7.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
7.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
7.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
7.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
7.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
6.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
6.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
6.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
6.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
6.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
6.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
6.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
6.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
6.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
6.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
6.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
6.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
6.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
5.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
5.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
5.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
5.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
5.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
4.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
4.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
4.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
3.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
3.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
3.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
3.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
3.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
1.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
1.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
1.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
1.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
1.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SRD5A3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
35.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
27.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
26.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
22.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
22.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
22.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
22.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
22.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
21.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
21.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
21.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
20.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
20.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
18.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
18.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
17.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
17.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
17.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
17.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
16.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
16.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
15.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
15.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
15.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
15.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
15.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
15.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
15.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
14.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
14.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
14.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
14.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
14.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
14.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
14.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
14.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
14.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
13.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
13.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
13.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
13.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
13.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
13.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
13.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
13.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
13.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
13.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
13.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
13.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
12.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
12.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
12.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
12.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
12.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
12.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
12.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
12.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
12.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
12.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
12.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
12.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
12.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
11.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
11.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
11.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
11.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
11.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
11.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
11.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
11.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
11.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
11.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
11.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
11.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
11.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
10.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
10.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
10.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
10.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
10.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
10.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
10.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
10.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
10.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
10.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
9.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
9.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
9.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
9.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
9.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
9.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
9.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
9.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
9.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
8.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
8.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
7.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
6.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SRD5A3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
58.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
42.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
39.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
34.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
29.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
27.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
26.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
26.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
26.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
25.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
25.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
25.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
25.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
24.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
23.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
23.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
23.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
22.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
22.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
22.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
21.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
21.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
20.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
19.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
19.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
19.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
19.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
18.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
18.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
18.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
18.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
17.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
17.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
17.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
16.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
16.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
16.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
16.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
15.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
15.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
15.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
15.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
15.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
15.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
15.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
14.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
14.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
14.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
14.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
14.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
14.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
14.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
14.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
14.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
14.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
14.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
13.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
13.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
13.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
13.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
13.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
13.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
13.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
13.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
13.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
13.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
13.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
12.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
12.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
12.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
12.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
12.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
12.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
12.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
12.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
12.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
12.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
12.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
12.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
12.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
12.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
12.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
11.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
11.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
11.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
11.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
11.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
11.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
11.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
11.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
11.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
11.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
11.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
10.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
10.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
10.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
10.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
10.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
10.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
10.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
10.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
10.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
10.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
10.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
10.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
10.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
10.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
10.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
10.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
10.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
10.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
10.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
10.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
9.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
9.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
9.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
9.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
9.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
9.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
9.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
9.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
9.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
9.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
9.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
9.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
9.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
9.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
9.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
9.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
9.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
8.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
8.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
8.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
8.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
8.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
8.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
8.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
8.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
8.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
8.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
8.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
8.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
8.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
8.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
8.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
8.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
8.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
8.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
8.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
8.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
8.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
8.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
8.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
8.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
8.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
8.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
8.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
8.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
8.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
8.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
8.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
8.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
7.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
7.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
7.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
7.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
7.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
7.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
7.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
7.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
7.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
7.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
7.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
7.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
7.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
7.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
7.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
7.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
7.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
7.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
7.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
7.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
7.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
7.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
7.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
7.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
7.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
6.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
6.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
6.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
6.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
6.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
6.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
6.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
6.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
6.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
6.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
6.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
6.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
6.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
6.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
6.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
6.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
6.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
6.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
6.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
6.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
5.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
5.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
5.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
5.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
5.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
5.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
5.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
5.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
5.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
5.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
5.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
5.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
5.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
5.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
5.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
5.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
5.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
5.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
5.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
5.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
5.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
5.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
5.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
5.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
5.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
5.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
5.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
4.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
4.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
4.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
4.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
4.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
4.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
4.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
4.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
4.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
4.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
4.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
4.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
4.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
4.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
4.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
4.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
3.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
3.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
3.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
3.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
3.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
3.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
3.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
2.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
2.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
2.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
2.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
2.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
2.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
2.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
2.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
1.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
1.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
1.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
0.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
0.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088690003
Tumor
1.4
CPT0086950003
Tumor
1.4
CPT0025230003
Tumor
1.1
CPT0025050003
Tumor
1.1
CPT0092160003
Tumor
1.1
CPT0001340003
Tumor
1.1
CPT0025110003
Tumor
1.0
CPT0010110003
Tumor
1.0
CPT0078990003
Tumor
0.9
CPT0088550004
Tumor
0.9
CPT0088480003
Tumor
0.9
CPT0088630003
Tumor
0.8
CPT0075130003
Tumor
0.8
CPT0086820003
Tumor
0.8
CPT0026410003
Tumor
0.7
CPT0023350003
Tumor
0.7
CPT0002350011
Tumor
0.7
CPT0019130003
Tumor
0.7
CPT0079270003
Tumor
0.7
CPT0081600003
Tumor
0.6
CPT0089480003
Normal
0.6
CPT0078800003
Tumor
0.6
CPT0001540009
Tumor
0.6
CPT0077110003
Tumor
0.6
CPT0092190003
Normal
0.6
CPT0078830003
Tumor
0.6
CPT0025880003
Tumor
0.6
CPT0085670003
Tumor
0.6
CPT0079410003
Tumor
0.6
CPT0088500001
Normal
0.5
CPT0079480003
Tumor
0.5
CPT0012280003
Tumor
0.5
CPT0079380003
Tumor
0.5
CPT0001260009
Tumor
0.5
CPT0000870016
Tumor
0.5
CPT0010160003
Tumor
0.5
CPT0086360003
Tumor
0.5
CPT0026420001
Normal
0.5
CPT0063630003
Tumor
0.5
CPT0012550003
Tumor
0.4
CPT0014450004
Tumor
0.4
CPT0015910003
Tumor
0.4
CPT0071150004
Tumor
0.4
CPT0012670003
Tumor
0.4
CPT0092310003
Normal
0.4
CPT0006440003
Tumor
0.4
CPT0069000003
Tumor
0.4
CPT0065430003
Tumor
0.3
CPT0009000003
Tumor
0.3
CPT0010170001
Normal
0.3
CPT0012180003
Tumor
0.3
CPT0065870003
Tumor
0.3
CPT0079230003
Tumor
0.3
CPT0092730003
Tumor
0.3
CPT0086870003
Tumor
0.3
CPT0088900003
Tumor
0.3
CPT0014370004
Tumor
0.3
CPT0007320003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0079430001
Normal
0.2
CPT0006530001
Normal
0.2
CPT0025170003
Tumor
0.2
CPT0088710001
Normal
0.2
CPT0089460004
Tumor
0.2
CPT0002370001
Normal
0.2
CPT0001180009
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0092290003
Tumor
0.2
CPT0065810003
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0088640003
Normal
0.1
CPT0086370003
Normal
0.1
CPT0007470001
Normal
0.1
CPT0001220008
Tumor
0.1
CPT0006630003
Tumor
0.1
CPT0011410003
Tumor
0.1
CPT0000790001
Normal
0.1
CPT0077140001
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0089020003
Tumor
0.0
CPT0065930003
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0092790003
Tumor
0.0
CPT0078840001
Normal
0.0
CPT0065450001
Normal
0.0
CPT0087050003
Normal
0.0
CPT0084590001
Normal
0.0
CPT0081880003
Tumor
0.0
CPT0077500001
Normal
0.0
CPT0023360001
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0087040003
Tumor
-0.1
CPT0001270001
Normal
-0.1
CPT0024680001
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0063320003
Tumor
-0.1
CPT0007860003
Tumor
-0.1
CPT0088970003
Tumor
-0.1
CPT0007870001
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0076330003
Tumor
-0.1
CPT0086890003
Normal
-0.1
CPT0014160003
Tumor
-0.1
CPT0020120003
Tumor
-0.1
CPT0088920001
Normal
-0.1
CPT0025580004
Tumor
-0.1
CPT0066520001
Normal
-0.2
CPT0078930003
Tumor
-0.2
CPT0079510001
Normal
-0.2
CPT0021240003
Tumor
-0.2
CPT0086830003
Normal
-0.2
CPT0077490003
Tumor
-0.2
CPT0064370003
Tumor
-0.2
CPT0001510001
Normal
-0.2
CPT0081990003
Tumor
-0.2
CPT0017450001
Normal
-0.2
CPT0088570001
Normal
-0.2
CPT0001230001
Normal
-0.2
CPT0075720003
Tumor
-0.2
CPT0012770003
Normal
-0.3
CPT0000640003
Tumor
-0.3
CPT0023710001
Normal
-0.3
CPT0012370003
Tumor
-0.3
CPT0069190001
Normal
-0.3
CPT0001500009
Tumor
-0.3
CPT0065820001
Normal
-0.3
CPT0069160003
Tumor
-0.3
CPT0076350001
Normal
-0.3
CPT0086970003
Normal
-0.3
CPT0000890001
Normal
-0.3
CPT0012640003
Normal
-0.3
CPT0025920001
Normal
-0.3
CPT0064400001
Normal
-0.3
CPT0017850003
Tumor
-0.3
CPT0078940001
Normal
-0.4
CPT0000660001
Normal
-0.4
CPT0079300001
Normal
-0.4
CPT0088780001
Normal
-0.4
CPT0084560003
Tumor
-0.4
CPT0082010001
Normal
-0.4
CPT0019160001
Normal
-0.4
CPT0063330001
Normal
-0.4
CPT0014470001
Normal
-0.4
CPT0065750003
Tumor
-0.4
CPT0075560003
Tumor
-0.5
CPT0001350001
Normal
-0.5
CPT0009020003
Normal
-0.5
CPT0078530001
Normal
-0.5
CPT0075570001
Normal
-0.5
CPT0077320001
Normal
-0.5
CPT0075170001
Normal
-0.5
CPT0006950001
Normal
-0.6
CPT0013790003
Normal
-0.6
CPT0025060001
Normal
-0.6
CPT0069010001
Normal
-0.6
CPT0001190001
Normal
-0.6
CPT0011240003
Tumor
-0.7
CPT0066480003
Tumor
-0.7
CPT0020020001
Normal
-0.7
CPT0079180003
Tumor
-0.7
CPT0078510003
Tumor
-0.7
CPT0092740003
Normal
-0.7
CPT0006730001
Normal
-0.7
CPT0019990003
Tumor
-0.7
CPT0014350001
Normal
-0.7
CPT0023690003
Tumor
-0.8
CPT0009060003
Tumor
-0.8
CPT0078670001
Normal
-0.8
CPT0015730003
Tumor
-0.8
CPT0014130001
Normal
-0.8
CPT0081620001
Normal
-0.8
CPT0012090003
Normal
-0.9
CPT0012290003
Normal
-0.9
CPT0066430001
Normal
-0.9
CPT0010120001
Normal
-0.9
CPT0066470004
Tumor
-0.9
CPT0000780007
Tumor
-0.9
CPT0077310003
Tumor
-1.0
CPT0020130001
Normal
-1.0
CPT0078660003
Tumor
-1.0
CPT0002270011
Tumor
-1.0
CPT0018250001
Normal
-1.0
CPT0086030003
Tumor
-1.0
CPT0025610001
Normal
-1.2
CPT0012570003
Normal
-1.2
CPT0088760003
Tumor
-1.4
CPT0012920003
Normal
-2.0
CPT0006900003
Tumor
-2.1
CPT0009080003
Normal
-2.2
CPT0012900004
Tumor
-2.3
CPT0017410003
Tumor
-2.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
