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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTPN12 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
63.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
46.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
37.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
31.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
27.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
24.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
24.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
22.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
20.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
19.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
17.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
17.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
17.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
16.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
16.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
15.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
15.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
13.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
13.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
13.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
12.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
12.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
12.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
11.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
11.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
11.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
11.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
10.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
10.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
10.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
10.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
10.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
9.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
9.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
9.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
9.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
9.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
9.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
8.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
8.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
8.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
8.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
8.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
8.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
8.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
7.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
7.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
7.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
6.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
6.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
6.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
6.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
6.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
6.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
6.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
6.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
5.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
4.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
4.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
4.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
3.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
3.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTPN12 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
44.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
191.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
134.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
109.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
107.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
106.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
102.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
99.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
98.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
94.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
91.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
89.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
89.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
88.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
84.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
84.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
84.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
83.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
82.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
82.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
82.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
82.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
80.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
80.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
80.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
80.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
78.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
78.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
78.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
77.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
77.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
77.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
76.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
76.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
76.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
76.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
75.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
75.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
74.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
74.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
73.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
73.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
72.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
72.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
71.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
71.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
71.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
71.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
70.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
70.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
70.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
70.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
69.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
68.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
68.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
68.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
68.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
68.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
68.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
67.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
67.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
67.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
66.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
66.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
66.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
66.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
65.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
65.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
64.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
64.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
64.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
64.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
64.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
63.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
63.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
63.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
63.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
62.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
62.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
62.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
62.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
62.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
61.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
61.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
61.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
61.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
61.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
61.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
61.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
61.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
61.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
61.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
61.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
61.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
60.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
60.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
60.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
60.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
59.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
59.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
59.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
58.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
58.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
58.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
58.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
58.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
58.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
57.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
57.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
57.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
57.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
57.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
57.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
57.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
57.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
57.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
56.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
56.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
56.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
56.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
56.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
56.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
56.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
56.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
56.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
55.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
55.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
55.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
55.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
55.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
55.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
55.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
55.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
55.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
55.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
54.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
54.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
54.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
54.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
54.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
54.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
54.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
54.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
54.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
54.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
54.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
54.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
53.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
53.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
53.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
53.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
53.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
53.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
53.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
53.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
52.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
52.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
52.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
52.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
52.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
52.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
52.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
52.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
52.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
51.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
51.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
51.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
51.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
51.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
51.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
51.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
51.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
51.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
51.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
51.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
51.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
51.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
51.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
50.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
50.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
50.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
50.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
50.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
50.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
50.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
50.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
50.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
50.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
50.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
50.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
49.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
49.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
49.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
49.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
49.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
49.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
49.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
49.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
49.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
49.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
49.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
48.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
48.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
48.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
48.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
48.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
48.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
48.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
48.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
48.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
48.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
48.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
48.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
48.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
48.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
48.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
48.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
47.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
47.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
47.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
47.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
47.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
47.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
47.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
47.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
47.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
47.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
46.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
46.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
46.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
46.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
46.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
46.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
46.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
46.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
46.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
46.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
46.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
46.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
46.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
46.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
45.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
45.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
45.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
45.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
45.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
45.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
45.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
45.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
45.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
45.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
45.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
45.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
44.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
44.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
44.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
44.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
44.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
44.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
44.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
44.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
44.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
44.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
44.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
44.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
43.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
43.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
43.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
43.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
43.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
43.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
43.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
43.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
42.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
42.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
42.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
42.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
42.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
42.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
42.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
42.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
42.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
42.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
42.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
42.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
42.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
42.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
41.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
41.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
41.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
40.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
40.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
40.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
40.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
40.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
40.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
40.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
40.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
40.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
40.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
39.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
39.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
39.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
39.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
39.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
39.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
39.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
38.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
38.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
38.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
38.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
38.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
38.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
38.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
38.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
38.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
37.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
37.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
37.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
37.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
37.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
37.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
36.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
36.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
36.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
36.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
36.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
36.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
36.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
35.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
35.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
35.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
35.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
35.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
35.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
34.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
34.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
34.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
34.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
34.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
34.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
34.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
34.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
33.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
33.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
33.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
33.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
33.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
33.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
33.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
33.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
33.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
32.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
32.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
32.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
32.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
32.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
32.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
32.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
32.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
32.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
31.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
31.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
31.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
31.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
31.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
31.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
31.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
31.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
31.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
31.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
31.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
31.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
31.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
31.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
30.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
30.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
30.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
30.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
30.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
30.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
30.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
30.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
29.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
29.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
29.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
29.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
29.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
29.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
29.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
29.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
29.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
29.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
29.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
29.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
29.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
29.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
28.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
28.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
28.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
28.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
28.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
28.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
28.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
28.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
27.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
27.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
27.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
27.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
27.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
27.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
27.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
26.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
26.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
26.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
26.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
26.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
26.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
26.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
26.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
26.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
26.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
26.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
26.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
26.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
26.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
25.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
25.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
25.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
25.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
25.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
25.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
25.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
24.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
24.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
24.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
24.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
24.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
24.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
24.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
24.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
24.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
24.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
24.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
24.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
24.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
24.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
23.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
23.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
23.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
23.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
23.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
23.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
23.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
22.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
22.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
22.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
22.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
22.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
22.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
22.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
21.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
21.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
21.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
20.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
20.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
19.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
19.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
19.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
19.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
19.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
19.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
19.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
19.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
19.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
18.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
18.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
17.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
17.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
17.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
17.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
17.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
17.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
17.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
16.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
16.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
16.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
15.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
15.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
15.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
14.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
14.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
14.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
14.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
14.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
13.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
13.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
13.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
12.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
12.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
11.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
11.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
11.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
11.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
11.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
11.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
10.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
10.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
9.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
9.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
9.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
7.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
6.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
6.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
6.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
6.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
5.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
4.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
4.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTPN12 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
68.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
125.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
125.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
118.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
112.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
108.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
103.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
101.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
100.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
98.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
96.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
95.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
95.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
93.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
91.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
91.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
90.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
89.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
89.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
86.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
86.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
84.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
84.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
82.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
82.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
82.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
82.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
82.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
82.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
81.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
81.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
81.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
81.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
78.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
77.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
76.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
76.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
76.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
74.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
74.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
73.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
72.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
71.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
71.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
69.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
69.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
69.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
67.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
67.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
67.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
67.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
66.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
66.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
65.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
64.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
64.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
63.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
63.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
63.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
63.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
63.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
62.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
62.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
62.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
62.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
61.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
60.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
60.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
59.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
59.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
59.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
58.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
57.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
56.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
56.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
54.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
54.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
52.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
50.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
50.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
49.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
49.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
46.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
46.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
45.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
44.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
44.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
42.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
42.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
40.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
39.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
38.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
38.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
38.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
34.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
34.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
32.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
30.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
22.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
20.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTPN12 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
139.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
85.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
82.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
78.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
72.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
67.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
67.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
66.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
65.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
65.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
58.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
58.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
56.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
55.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
54.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
54.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
54.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
53.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
52.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
51.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
51.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
50.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
50.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
48.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
47.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
47.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
46.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
46.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
44.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
44.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
44.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
44.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
44.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
44.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
43.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
43.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
43.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
42.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
42.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
41.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
41.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
40.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
40.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
40.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
40.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
40.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
40.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
40.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
39.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
39.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
38.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
38.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
38.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
38.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
38.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
38.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
37.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
37.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
37.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
37.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
36.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
36.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
36.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
36.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
36.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
35.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
35.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
35.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
35.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
35.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
35.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
35.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
34.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
34.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
34.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
34.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
34.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
33.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
33.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
33.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
33.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
33.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
33.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
33.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
33.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
32.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
32.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
32.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
32.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
32.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
31.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
31.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
31.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
31.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
31.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
31.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
31.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
31.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
31.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
30.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
30.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
30.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
30.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
30.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
30.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
30.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
29.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
29.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
29.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
29.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
29.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
28.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
28.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
28.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
28.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
28.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
27.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
27.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
27.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
27.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
27.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
26.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
26.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
26.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
26.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
26.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
26.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
25.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
25.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
25.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
25.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
25.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
25.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
25.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
25.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
25.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
24.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
24.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
24.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
24.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
24.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
24.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
24.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
24.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
24.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
24.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
23.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
23.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
23.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
23.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
23.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
23.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
23.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
23.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
23.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
22.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
22.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
22.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
22.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
21.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
21.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
21.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
21.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
21.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
21.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
21.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
21.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
21.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
21.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
21.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
21.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
21.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
20.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
20.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
20.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
20.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
20.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
20.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
20.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
20.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
19.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
19.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
19.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
19.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
19.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
19.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
19.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
18.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
18.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
18.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
18.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
18.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
18.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
18.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
18.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
17.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
17.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
17.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
17.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
17.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
17.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
17.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
17.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
17.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
17.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
17.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
17.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
17.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
16.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
16.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
16.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
16.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
16.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
16.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
15.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
15.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
15.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
15.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
15.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
15.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
15.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
15.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
15.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
14.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
14.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
14.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
14.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
14.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
14.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
14.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
14.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
13.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
13.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
13.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
13.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
12.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
12.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
12.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
12.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
12.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
12.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
12.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
12.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
12.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
11.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
11.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
11.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
11.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
11.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
10.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
10.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
10.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
10.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
9.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
9.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
9.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
9.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
9.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
9.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
9.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
9.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
8.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
8.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
8.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
8.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
8.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
8.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
7.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
7.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
7.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
7.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
7.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
6.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
6.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
5.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
5.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
4.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
4.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
3.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.6
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0081880003
Tumor
1.0
CPT0012080003
Tumor
0.9
CPT0079410003
Tumor
0.9
CPT0001340003
Tumor
0.8
CPT0012280003
Tumor
0.8
CPT0084560003
Tumor
0.8
CPT0071150004
Tumor
0.8
CPT0078510003
Tumor
0.7
CPT0088760003
Tumor
0.7
CPT0023350003
Tumor
0.7
CPT0077490003
Tumor
0.7
CPT0085670003
Tumor
0.7
CPT0010160003
Tumor
0.7
CPT0088550004
Tumor
0.7
CPT0000780007
Tumor
0.7
CPT0025350003
Tumor
0.7
CPT0014450004
Tumor
0.7
CPT0065690003
Tumor
0.6
CPT0063630003
Tumor
0.6
CPT0025050003
Tumor
0.6
CPT0088630003
Tumor
0.6
CPT0017410003
Tumor
0.6
CPT0065870003
Tumor
0.6
CPT0025880003
Tumor
0.6
CPT0081600003
Tumor
0.6
CPT0092730003
Tumor
0.6
CPT0012370003
Tumor
0.6
CPT0000640003
Tumor
0.5
CPT0075130003
Tumor
0.5
CPT0001540009
Tumor
0.5
CPT0009000003
Tumor
0.5
CPT0021240003
Tumor
0.5
CPT0001260009
Tumor
0.5
CPT0092290003
Tumor
0.5
CPT0075720003
Tumor
0.5
CPT0006630003
Tumor
0.5
CPT0066470004
Tumor
0.5
CPT0088900003
Tumor
0.5
CPT0019130003
Tumor
0.5
CPT0017850003
Tumor
0.5
CPT0009060003
Tumor
0.5
CPT0086950003
Tumor
0.5
CPT0000870016
Tumor
0.5
CPT0015810003
Tumor
0.5
CPT0026410003
Tumor
0.4
CPT0078830003
Tumor
0.4
CPT0019990003
Tumor
0.4
CPT0012670003
Tumor
0.4
CPT0086030003
Tumor
0.4
CPT0079380003
Tumor
0.4
CPT0079230003
Tumor
0.4
CPT0001220008
Tumor
0.4
CPT0069160003
Tumor
0.4
CPT0014370004
Tumor
0.4
CPT0089020003
Tumor
0.4
CPT0086870003
Tumor
0.4
CPT0011410003
Tumor
0.4
CPT0015910003
Tumor
0.4
CPT0011240003
Tumor
0.4
CPT0092790003
Tumor
0.4
CPT0086820003
Tumor
0.4
CPT0006440003
Tumor
0.3
CPT0025290003
Tumor
0.3
CPT0088480003
Tumor
0.3
CPT0089460004
Tumor
0.3
CPT0007860003
Tumor
0.3
CPT0077110003
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0079480003
Tumor
0.3
CPT0081990003
Tumor
0.3
CPT0001500009
Tumor
0.3
CPT0025110003
Tumor
0.3
CPT0065930003
Tumor
0.3
CPT0025230003
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0025580004
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0076330003
Tumor
0.3
CPT0065430003
Tumor
0.3
CPT0066480003
Tumor
0.3
CPT0007320003
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0014160003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0063320003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0065750003
Tumor
0.2
CPT0012180003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0002350011
Tumor
0.1
CPT0012550003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0065810003
Tumor
0.1
CPT0092190003
Normal
0.1
CPT0025170003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0075560003
Tumor
0.1
CPT0001270001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0012900004
Tumor
0.1
CPT0064370003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0015730003
Tumor
0.0
CPT0069190001
Normal
-0.1
CPT0020120003
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0017450001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0001180009
Tumor
-0.2
CPT0012920003
Normal
-0.2
CPT0079510001
Normal
-0.2
CPT0077310003
Tumor
-0.2
CPT0012640003
Normal
-0.2
CPT0088970003
Tumor
-0.2
CPT0079300001
Normal
-0.2
CPT0078530001
Normal
-0.2
CPT0069000003
Tumor
-0.2
CPT0006530001
Normal
-0.2
CPT0018250001
Normal
-0.3
CPT0012290003
Normal
-0.3
CPT0065820001
Normal
-0.3
CPT0076350001
Normal
-0.3
CPT0066520001
Normal
-0.3
CPT0001550001
Normal
-0.3
CPT0063640001
Normal
-0.3
CPT0002370001
Normal
-0.3
CPT0088710001
Normal
-0.3
CPT0014470001
Normal
-0.3
CPT0001510001
Normal
-0.3
CPT0089040001
Normal
-0.3
CPT0009020003
Normal
-0.3
CPT0000660001
Normal
-0.3
CPT0020130001
Normal
-0.3
CPT0082010001
Normal
-0.3
CPT0025060001
Normal
-0.3
CPT0086830003
Normal
-0.3
CPT0088570001
Normal
-0.3
CPT0024680001
Normal
-0.3
CPT0025920001
Normal
-0.4
CPT0023360001
Normal
-0.4
CPT0063330001
Normal
-0.4
CPT0088640003
Normal
-0.4
CPT0012090003
Normal
-0.4
CPT0092740003
Normal
-0.4
CPT0086970003
Normal
-0.4
CPT0025610001
Normal
-0.4
CPT0012570003
Normal
-0.4
CPT0075570001
Normal
-0.4
CPT0013790003
Normal
-0.4
CPT0019160001
Normal
-0.4
CPT0086890003
Normal
-0.4
CPT0077140001
Normal
-0.4
CPT0064400001
Normal
-0.4
CPT0000890001
Normal
-0.4
CPT0088780001
Normal
-0.4
CPT0079430001
Normal
-0.4
CPT0002270011
Tumor
-0.4
CPT0020020001
Normal
-0.4
CPT0001350001
Normal
-0.4
CPT0088920001
Normal
-0.5
CPT0065450001
Normal
-0.5
CPT0078940001
Normal
-0.5
CPT0001230001
Normal
-0.5
CPT0088500001
Normal
-0.5
CPT0089480003
Normal
-0.5
CPT0000790001
Normal
-0.5
CPT0007470001
Normal
-0.5
CPT0069010001
Normal
-0.5
CPT0078670001
Normal
-0.5
CPT0014130001
Normal
-0.5
CPT0007870001
Normal
-0.5
CPT0077500001
Normal
-0.5
CPT0010170001
Normal
-0.5
CPT0066430001
Normal
-0.5
CPT0081620001
Normal
-0.5
CPT0078840001
Normal
-0.5
CPT0079180003
Tumor
-0.5
CPT0009080003
Normal
-0.5
CPT0092800003
Normal
-0.5
CPT0026420001
Normal
-0.5
CPT0078660003
Tumor
-0.5
CPT0006950001
Normal
-0.5
CPT0006730001
Normal
-0.6
CPT0092310003
Normal
-0.6
CPT0086370003
Normal
-0.6
CPT0078800003
Tumor
-0.6
CPT0012770003
Normal
-0.6
CPT0087050003
Normal
-0.6
CPT0014350001
Normal
-0.6
CPT0023710001
Normal
-0.6
CPT0079000001
Normal
-0.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
