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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEM1 is potential prognostic, high expression is unfavorable in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
282.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
644.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
612.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
563.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
516.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
489.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
487.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
484.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
483.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
450.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
424.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
411.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
402.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
388.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
375.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
342.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
339.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
337.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
328.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
324.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
313.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
296.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
282.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
282.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
281.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
278.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
277.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
273.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
272.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
268.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
267.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
262.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
260.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
257.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
252.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
250.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
244.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
242.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
242.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
232.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
226.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
225.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
222.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
211.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
210.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
209.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
205.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
202.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
198.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
198.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
194.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
192.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
183.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
177.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
174.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
172.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
171.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
162.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
148.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
141.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
112.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
111.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
98.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
93.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEM1 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
183.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
774.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
638.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
435.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
413.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
374.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
371.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
366.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
362.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
358.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
358.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
354.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
354.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
346.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
329.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
324.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
320.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
319.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
318.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
312.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
311.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
311.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
308.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
305.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
305.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
301.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
299.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
298.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
297.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
296.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
293.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
289.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
289.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
288.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
288.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
286.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
280.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
279.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
278.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
278.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
277.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
276.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
275.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
274.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
271.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
271.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
271.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
270.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
269.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
268.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
268.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
268.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
266.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
263.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
263.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
261.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
259.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
258.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
256.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
254.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
254.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
253.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
252.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
251.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
251.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
251.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
247.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
246.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
244.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
244.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
244.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
243.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
241.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
240.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
240.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
240.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
239.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
239.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
238.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
237.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
237.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
234.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
233.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
232.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
232.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
232.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
231.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
230.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
230.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
230.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
229.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
229.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
228.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
227.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
227.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
225.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
224.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
224.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
224.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
223.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
223.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
223.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
223.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
222.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
222.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
221.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
221.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
221.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
220.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
218.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
218.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
216.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
216.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
216.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
215.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
214.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
214.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
213.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
213.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
213.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
211.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
211.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
211.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
210.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
209.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
209.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
209.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
209.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
209.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
208.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
207.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
206.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
206.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
205.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
205.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
205.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
205.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
204.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
204.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
204.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
203.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
203.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
203.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
202.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
202.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
202.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
202.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
202.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
201.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
200.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
200.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
200.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
200.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
199.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
199.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
199.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
199.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
199.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
199.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
199.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
199.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
199.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
199.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
197.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
197.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
196.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
196.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
195.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
195.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
195.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
195.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
194.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
194.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
194.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
194.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
194.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
194.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
193.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
193.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
192.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
191.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
191.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
191.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
191.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
190.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
190.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
190.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
189.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
189.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
189.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
189.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
189.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
188.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
188.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
187.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
187.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
186.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
186.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
186.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
186.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
186.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
186.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
186.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
185.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
185.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
185.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
185.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
185.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
184.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
184.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
184.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
183.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
183.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
183.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
183.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
183.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
182.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
181.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
181.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
180.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
180.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
180.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
180.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
180.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
180.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
180.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
180.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
179.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
179.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
179.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
179.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
178.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
178.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
178.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
177.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
177.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
177.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
177.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
176.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
176.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
176.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
176.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
176.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
176.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
176.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
175.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
175.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
175.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
175.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
175.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
175.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
175.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
175.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
174.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
174.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
174.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
174.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
173.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
173.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
173.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
173.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
172.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
172.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
172.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
172.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
172.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
172.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
172.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
171.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
171.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
171.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
170.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
170.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
170.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
170.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
169.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
169.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
169.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
169.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
169.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
169.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
169.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
168.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
168.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
168.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
168.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
168.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
168.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
167.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
167.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
166.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
166.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
166.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
165.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
165.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
165.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
165.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
165.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
165.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
164.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
164.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
164.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
164.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
164.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
164.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
163.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
163.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
163.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
163.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
162.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
162.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
162.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
162.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
162.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
162.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
161.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
160.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
160.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
160.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
160.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
160.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
159.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
159.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
159.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
159.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
159.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
158.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
158.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
158.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
158.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
157.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
157.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
157.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
157.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
157.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
156.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
156.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
156.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
156.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
155.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
155.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
154.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
154.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
154.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
154.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
153.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
153.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
153.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
153.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
153.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
153.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
153.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
152.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
152.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
152.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
151.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
151.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
151.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
151.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
150.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
150.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
150.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
150.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
149.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
149.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
148.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
148.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
148.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
148.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
147.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
147.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
147.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
147.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
147.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
146.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
146.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
146.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
145.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
144.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
144.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
144.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
144.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
144.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
144.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
143.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
143.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
143.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
143.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
143.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
142.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
142.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
142.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
142.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
142.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
141.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
141.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
141.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
141.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
141.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
141.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
140.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
140.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
140.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
140.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
140.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
139.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
139.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
138.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
138.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
138.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
138.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
137.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
137.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
136.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
136.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
136.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
135.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
135.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
135.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
134.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
134.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
134.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
133.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
133.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
133.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
133.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
132.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
132.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
132.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
132.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
132.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
132.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
132.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
131.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
131.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
131.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
131.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
131.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
130.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
130.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
130.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
129.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
128.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
128.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
128.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
128.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
128.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
127.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
126.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
125.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
125.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
125.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
125.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
125.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
125.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
124.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
124.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
124.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
123.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
123.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
123.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
123.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
122.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
122.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
122.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
122.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
122.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
122.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
121.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
120.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
120.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
119.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
119.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
119.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
118.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
118.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
118.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
117.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
117.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
116.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
115.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
115.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
115.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
115.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
112.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
111.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
111.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
110.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
110.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
110.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
110.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
110.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
109.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
108.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
108.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
107.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
106.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
106.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
105.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
105.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
105.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
103.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
103.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
102.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
98.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
97.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
96.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
94.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
92.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
90.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
88.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
87.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
83.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
79.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
78.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
77.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
77.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
73.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
64.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
57.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
56.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEM1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
204.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
387.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
377.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
372.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
370.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
365.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
354.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
344.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
334.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
322.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
319.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
294.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
292.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
286.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
283.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
275.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
274.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
274.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
268.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
259.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
255.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
251.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
244.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
244.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
243.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
242.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
237.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
236.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
235.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
234.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
232.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
232.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
225.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
220.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
219.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
219.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
215.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
212.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
209.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
206.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
205.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
205.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
205.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
195.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
195.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
194.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
191.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
190.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
190.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
188.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
186.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
181.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
181.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
181.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
177.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
175.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
175.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
173.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
172.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
170.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
168.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
168.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
168.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
167.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
166.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
165.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
164.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
164.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
163.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
162.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
162.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
162.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
157.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
157.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
157.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
156.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
155.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
155.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
151.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
150.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
148.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
147.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
146.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
145.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
143.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
141.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
141.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
140.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
139.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
138.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
137.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
137.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
134.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
131.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
131.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
130.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
128.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
127.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
112.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
107.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEM1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
252.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
646.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
640.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
577.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
559.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
541.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
531.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
529.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
526.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
517.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
510.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
510.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
505.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
477.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
474.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
469.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
468.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
466.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
457.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
456.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
455.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
452.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
447.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
446.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
446.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
444.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
440.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
436.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
431.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
430.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
425.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
420.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
413.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
409.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
405.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
404.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
402.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
398.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
394.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
391.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
388.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
379.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
378.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
377.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
377.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
374.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
373.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
372.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
364.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
363.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
362.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
356.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
353.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
350.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
350.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
346.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
345.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
340.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
335.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
335.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
333.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
333.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
333.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
331.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
330.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
328.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
327.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
327.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
325.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
323.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
323.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
321.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
321.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
318.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
318.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
316.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
315.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
315.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
313.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
310.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
309.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
307.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
302.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
301.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
300.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
299.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
297.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
296.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
296.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
296.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
296.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
295.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
295.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
295.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
293.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
293.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
293.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
290.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
282.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
278.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
277.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
275.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
275.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
275.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
272.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
271.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
268.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
267.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
266.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
265.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
265.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
262.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
261.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
261.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
261.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
260.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
260.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
259.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
258.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
257.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
257.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
254.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
253.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
252.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
251.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
250.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
248.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
247.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
247.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
247.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
247.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
246.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
246.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
246.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
245.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
244.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
243.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
243.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
243.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
242.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
237.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
236.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
232.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
232.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
230.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
229.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
227.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
227.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
226.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
226.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
226.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
221.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
221.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
219.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
219.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
218.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
217.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
216.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
216.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
214.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
212.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
211.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
211.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
210.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
210.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
208.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
207.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
206.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
206.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
205.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
202.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
202.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
200.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
200.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
200.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
200.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
198.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
196.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
193.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
192.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
192.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
192.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
192.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
190.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
190.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
188.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
188.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
186.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
184.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
184.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
182.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
182.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
179.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
178.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
178.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
177.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
177.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
176.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
175.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
174.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
171.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
170.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
169.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
169.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
168.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
167.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
167.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
167.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
166.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
166.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
166.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
165.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
164.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
164.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
164.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
163.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
162.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
161.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
159.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
157.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
156.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
153.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
152.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
151.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
151.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
148.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
148.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
147.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
144.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
141.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
140.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
140.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
139.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
139.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
139.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
139.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
138.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
136.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
136.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
135.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
134.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
133.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
133.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
133.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
132.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
132.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
132.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
130.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
130.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
130.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
130.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
130.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
129.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
129.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
125.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
125.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
121.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
120.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
116.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
115.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
113.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
106.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
105.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
105.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
104.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
104.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
104.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
98.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
98.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
95.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
92.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
91.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
90.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
90.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
90.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
85.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
82.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
78.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
74.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
74.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
73.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
51.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
43.4
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
