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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MACF1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
92.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
82.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
79.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
76.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
75.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
74.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
69.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
68.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
67.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
67.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
63.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
61.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
61.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
59.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
59.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
58.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
57.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
57.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
56.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
56.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
54.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
53.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
53.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
52.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
51.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
50.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
49.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
48.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
48.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
48.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
47.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
46.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
45.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
45.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
43.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
42.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
41.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
41.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
40.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
40.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
40.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
40.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
39.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
39.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
38.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
35.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
35.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
35.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
34.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
34.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
34.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
34.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
31.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
30.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
30.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
30.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
30.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
28.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
27.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
25.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
23.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
21.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
21.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MACF1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
174.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
138.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
122.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
120.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
112.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
105.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
101.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
98.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
96.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
92.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
91.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
91.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
88.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
88.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
88.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
87.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
86.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
86.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
86.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
86.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
85.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
84.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
84.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
82.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
82.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
81.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
81.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
80.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
80.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
78.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
77.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
77.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
77.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
77.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
77.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
76.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
76.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
75.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
75.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
75.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
75.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
74.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
74.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
73.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
73.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
72.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
72.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
72.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
72.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
72.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
72.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
72.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
71.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
71.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
70.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
70.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
70.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
69.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
69.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
69.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
69.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
69.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
69.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
68.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
68.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
68.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
68.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
68.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
68.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
68.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
68.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
67.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
67.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
66.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
66.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
66.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
66.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
66.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
66.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
66.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
65.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
65.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
65.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
65.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
65.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
65.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
65.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
65.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
65.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
65.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
64.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
64.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
64.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
63.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
63.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
63.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
63.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
63.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
63.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
63.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
63.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
63.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
63.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
63.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
62.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
62.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
62.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
62.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
61.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
61.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
61.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
61.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
61.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
61.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
61.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
61.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
61.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
61.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
61.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
61.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
60.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
60.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
60.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
60.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
60.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
60.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
60.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
60.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
60.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
60.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
60.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
60.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
60.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
59.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
59.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
59.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
59.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
59.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
59.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
59.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
59.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
58.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
58.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
58.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
58.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
58.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
58.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
57.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
57.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
57.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
57.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
57.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
57.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
57.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
57.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
56.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
56.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
55.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
55.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
55.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
55.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
55.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
55.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
55.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
55.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
54.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
54.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
54.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
54.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
54.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
54.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
54.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
54.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
54.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
54.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
53.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
53.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
53.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
53.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
52.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
52.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
52.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
52.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
52.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
52.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
52.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
52.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
52.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
52.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
52.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
51.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
51.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
51.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
51.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
51.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
51.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
50.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
50.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
50.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
50.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
50.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
50.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
50.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
50.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
50.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
50.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
50.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
50.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
50.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
50.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
49.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
49.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
49.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
49.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
49.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
48.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
48.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
48.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
48.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
48.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
48.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
48.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
48.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
48.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
48.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
48.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
47.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
47.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
47.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
47.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
47.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
47.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
47.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
47.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
47.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
47.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
46.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
46.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
46.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
46.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
46.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
46.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
46.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
46.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
46.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
46.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
46.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
46.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
45.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
45.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
45.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
45.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
45.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
45.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
45.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
45.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
45.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
45.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
45.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
45.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
45.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
45.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
44.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
44.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
44.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
44.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
44.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
44.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
43.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
43.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
43.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
43.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
43.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
43.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
43.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
43.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
43.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
43.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
43.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
43.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
43.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
42.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
42.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
42.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
42.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
42.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
42.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
42.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
41.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
41.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
41.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
41.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
41.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
41.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
41.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
41.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
41.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
41.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
41.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
41.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
41.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
41.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
41.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
40.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
40.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
40.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
40.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
40.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
40.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
40.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
40.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
40.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
40.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
40.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
40.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
40.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
39.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
39.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
39.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
39.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
39.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
39.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
38.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
38.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
38.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
38.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
38.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
38.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
38.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
38.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
38.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
38.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
38.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
38.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
38.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
38.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
38.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
38.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
38.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
38.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
37.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
37.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
37.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
37.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
37.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
37.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
37.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
37.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
36.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
36.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
36.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
36.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
36.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
36.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
36.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
36.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
36.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
36.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
36.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
36.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
35.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
35.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
35.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
35.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
35.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
35.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
35.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
34.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
34.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
34.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
34.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
34.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
34.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
34.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
34.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
34.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
34.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
34.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
33.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
33.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
33.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
33.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
33.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
33.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
33.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
33.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
33.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
33.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
33.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
32.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
32.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
32.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
32.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
32.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
32.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
32.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
32.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
32.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
32.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
32.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
32.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
32.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
32.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
31.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
31.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
31.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
31.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
31.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
31.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
31.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
31.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
31.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
31.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
31.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
30.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
30.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
30.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
30.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
30.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
30.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
30.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
30.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
29.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
29.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
29.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
29.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
29.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
29.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
29.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
29.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
29.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
28.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
28.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
28.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
28.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
28.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
28.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
28.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
27.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
27.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
27.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
27.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
27.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
27.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
27.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
27.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
26.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
26.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
26.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
26.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
26.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
26.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
26.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
26.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
26.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
26.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
25.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
25.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
25.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
25.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
25.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
25.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
25.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
25.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
25.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
24.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
24.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
24.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
24.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
24.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
24.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
24.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
24.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
24.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
23.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
23.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
23.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
23.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
22.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
22.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
22.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
22.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
22.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
22.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
22.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
22.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
22.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
21.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
21.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
21.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
21.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
21.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
21.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
20.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
20.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
20.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
19.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
19.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
19.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
19.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
19.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
19.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
18.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
18.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
17.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
17.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
17.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
16.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
16.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
16.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
16.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
16.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
15.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
14.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
13.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
13.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
11.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
10.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
10.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
4.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MACF1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
125.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
111.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
96.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
82.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
78.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
76.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
76.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
73.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
69.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
68.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
67.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
67.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
66.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
66.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
64.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
62.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
62.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
61.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
59.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
59.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
59.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
58.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
57.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
57.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
56.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
56.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
55.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
54.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
54.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
54.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
53.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
52.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
51.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
50.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
50.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
50.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
50.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
49.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
48.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
48.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
48.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
48.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
48.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
47.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
47.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
47.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
46.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
46.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
46.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
46.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
45.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
45.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
45.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
44.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
44.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
43.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
43.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
43.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
43.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
42.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
42.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
41.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
41.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
41.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
41.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
40.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
40.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
39.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
39.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
38.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
38.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
37.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
37.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
36.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
36.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
35.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
35.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
34.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
33.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
33.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
32.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
30.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
30.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
30.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
29.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
29.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
29.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
28.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
28.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
28.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
27.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
26.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
23.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
22.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
21.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
21.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
20.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
17.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
16.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MACF1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
50.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
225.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
121.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
119.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
114.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
112.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
112.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
112.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
112.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
105.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
101.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
101.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
97.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
96.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
96.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
93.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
93.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
92.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
91.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
88.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
87.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
86.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
84.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
84.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
82.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
81.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
80.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
79.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
78.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
77.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
77.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
76.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
75.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
75.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
75.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
74.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
73.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
72.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
72.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
71.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
71.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
70.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
69.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
68.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
68.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
67.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
67.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
66.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
66.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
66.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
66.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
65.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
65.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
65.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
64.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
64.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
64.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
64.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
63.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
62.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
62.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
62.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
62.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
61.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
61.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
60.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
60.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
60.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
60.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
60.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
59.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
59.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
59.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
59.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
59.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
58.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
58.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
58.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
58.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
58.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
58.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
58.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
57.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
57.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
57.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
57.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
57.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
56.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
56.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
56.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
56.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
55.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
55.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
55.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
55.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
55.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
55.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
55.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
55.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
54.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
54.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
54.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
54.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
54.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
54.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
53.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
53.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
53.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
53.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
53.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
53.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
53.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
53.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
53.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
52.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
52.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
52.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
52.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
52.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
52.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
51.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
51.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
51.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
51.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
50.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
50.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
50.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
50.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
50.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
49.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
49.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
49.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
49.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
49.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
48.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
48.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
48.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
47.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
47.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
47.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
47.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
46.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
46.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
46.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
46.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
46.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
46.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
46.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
45.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
45.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
45.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
45.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
45.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
45.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
45.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
45.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
45.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
45.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
44.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
44.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
44.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
44.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
43.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
43.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
43.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
42.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
42.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
42.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
42.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
42.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
42.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
42.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
42.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
42.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
42.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
42.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
42.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
41.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
41.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
41.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
41.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
41.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
41.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
40.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
40.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
40.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
40.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
40.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
39.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
39.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
39.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
39.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
38.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
38.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
38.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
38.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
37.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
37.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
37.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
37.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
37.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
37.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
37.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
37.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
36.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
36.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
36.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
36.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
36.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
36.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
35.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
35.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
35.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
35.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
35.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
35.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
35.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
34.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
34.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
34.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
34.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
34.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
34.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
34.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
34.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
33.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
33.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
33.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
33.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
33.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
32.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
32.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
32.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
32.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
32.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
32.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
32.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
32.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
31.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
30.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
30.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
29.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
29.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
29.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
29.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
29.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
29.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
28.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
28.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
28.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
28.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
28.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
28.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
28.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
28.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
27.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
27.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
27.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
26.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
26.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
25.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
25.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
25.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
25.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
25.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
25.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
25.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
24.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
24.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
23.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
23.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
23.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
21.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
21.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
21.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
20.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
20.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
19.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
17.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
16.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
15.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
11.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
8.3
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
1.2
CPT0000640003
Tumor
0.7
CPT0078660003
Tumor
0.6
CPT0069160003
Tumor
0.6
CPT0069000003
Tumor
0.5
CPT0002270011
Tumor
0.5
CPT0088970003
Tumor
0.5
CPT0024670003
Tumor
0.5
CPT0009060003
Tumor
0.4
CPT0019130003
Tumor
0.4
CPT0001270001
Normal
0.4
CPT0025050003
Tumor
0.3
CPT0084560003
Tumor
0.3
CPT0012280003
Tumor
0.3
CPT0014370004
Tumor
0.3
CPT0066470004
Tumor
0.3
CPT0012370003
Tumor
0.3
CPT0001190001
Normal
0.3
CPT0009000003
Tumor
0.3
CPT0025230003
Tumor
0.2
CPT0092290003
Tumor
0.2
CPT0019990003
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0017850003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0025170003
Tumor
0.2
CPT0077320001
Normal
0.2
CPT0086870003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0085670003
Tumor
0.2
CPT0001340003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0017450001
Normal
0.2
CPT0084590001
Normal
0.2
CPT0021240003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0020120003
Tumor
0.2
CPT0075560003
Tumor
0.1
CPT0065820001
Normal
0.1
CPT0063640001
Normal
0.1
CPT0006440003
Tumor
0.1
CPT0088480003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0079380003
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0012090003
Normal
0.1
CPT0014160003
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0089460004
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0065450001
Normal
0.1
CPT0077310003
Tumor
0.1
CPT0081880003
Tumor
0.1
CPT0025060001
Normal
0.1
CPT0077490003
Tumor
0.1
CPT0088760003
Tumor
0.1
CPT0076330003
Tumor
0.1
CPT0014130001
Normal
0.1
CPT0025290003
Tumor
0.1
CPT0012770003
Normal
0.1
CPT0000660001
Normal
0.1
CPT0092310003
Normal
0.1
CPT0001180009
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0089040001
Normal
0.1
CPT0014350001
Normal
0.1
CPT0077110003
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0011240003
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0063630003
Tumor
0.1
CPT0011410003
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0075170001
Normal
0.1
CPT0066430001
Normal
0.1
CPT0006900003
Tumor
0.1
CPT0088710001
Normal
0.1
CPT0086030003
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0078830003
Tumor
0.1
CPT0092190003
Normal
0.1
CPT0013790003
Normal
0.1
CPT0025110003
Tumor
0.1
CPT0023360001
Normal
0.0
CPT0000780007
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0088920001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0065810003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0001500009
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0009020003
Normal
0.0
CPT0075720003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0065750003
Tumor
0.0
CPT0015910003
Tumor
0.0
CPT0078510003
Tumor
0.0
CPT0079510001
Normal
0.0
CPT0012080003
Tumor
0.0
CPT0077140001
Normal
0.0
CPT0026420001
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0089020003
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0009080003
Normal
0.0
CPT0023690003
Tumor
0.0
CPT0071150004
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0000790001
Normal
0.0
CPT0092790003
Tumor
0.0
CPT0082010001
Normal
0.0
CPT0012640003
Normal
0.0
CPT0025880003
Tumor
0.0
CPT0075130003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0023350003
Tumor
0.0
CPT0025580004
Tumor
0.0
CPT0025610001
Normal
0.0
CPT0087050003
Normal
0.0
CPT0092740003
Normal
0.0
CPT0010170001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0006730001
Normal
0.0
CPT0078990003
Tumor
0.0
CPT0012550003
Tumor
0.0
CPT0012570003
Normal
0.0
CPT0078840001
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0025920001
Normal
0.0
CPT0069010001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0012900004
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0064370003
Tumor
0.0
CPT0078800003
Tumor
0.0
CPT0089480003
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0086820003
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0076350001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0010120001
Normal
0.0
CPT0086890003
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0079300001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0007860003
Tumor
-0.1
CPT0014470001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0065870003
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0007320003
Tumor
-0.1
CPT0088690003
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0012180003
Tumor
-0.2
CPT0086950003
Tumor
-0.2
CPT0017410003
Tumor
-0.2
CPT0065930003
Tumor
-0.2
CPT0015730003
Tumor
-0.3
CPT0024680001
Normal
-0.3
CPT0088550004
Tumor
-0.3
CPT0079230003
Tumor
-0.4
CPT0002350011
Tumor
-0.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.