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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MACF1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.1
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
124.0
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
117.9
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
72.3
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
67.4
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
62.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
61.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
59.5
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
58.5
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
54.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
54.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
53.7
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
52.6
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
51.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
49.7
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
48.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
45.6
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
43.8
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
43.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
43.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
42.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
42.2
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
42.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
40.7
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
40.4
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
40.3
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
39.6
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
39.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
38.1
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
37.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
37.7
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
37.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
36.5
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
36.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
35.9
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
35.8
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
35.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
35.7
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
35.3
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
35.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
34.8
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
34.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
34.5
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
34.4
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
34.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
33.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
33.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
32.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
32.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
32.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
32.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
31.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
31.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
31.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
31.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
31.1
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
31.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
30.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
30.6
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
30.4
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
30.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
29.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
29.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
29.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
29.4
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
29.4
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
29.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
29.2
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
28.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
28.7
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
28.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
28.5
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
28.5
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
28.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
28.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
28.3
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
28.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
27.9
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
27.8
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
27.6
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
27.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
27.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
27.5
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
27.3
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
27.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
27.2
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
27.0
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
27.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
26.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
26.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
26.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
26.5
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
26.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
26.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
26.1
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
26.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
26.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
25.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
25.9
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
25.8
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
25.7
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
25.5
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
25.4
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
25.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
25.2
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
25.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
24.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
24.7
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
24.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
24.5
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
24.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
24.5
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
24.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
24.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
24.3
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
24.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
24.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
24.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
24.2
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
24.1
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
24.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
23.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
23.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
23.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
23.9
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
23.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
23.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
23.6
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
23.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
23.6
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
23.5
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
23.5
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
23.3
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
23.3
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
23.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
23.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
23.1
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
23.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
23.1
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
23.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
22.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
22.5
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
22.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
22.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
22.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
22.2
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
22.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
22.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
22.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
21.9
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
21.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
21.9
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
21.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
21.8
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
21.8
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
21.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
21.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
21.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
21.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
21.7
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
21.6
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
21.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
21.6
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
21.6
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
21.6
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
21.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
21.5
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
21.4
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
21.4
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
21.3
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
21.3
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
21.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
21.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
21.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
21.1
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
21.1
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
21.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
21.0
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
20.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
20.9
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
20.8
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
20.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
20.6
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
20.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
20.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
20.5
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
20.5
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
20.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
20.4
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
20.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
20.2
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
20.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
20.1
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
19.9
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
19.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
19.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
19.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
19.8
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
19.8
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
19.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
19.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
19.6
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
19.6
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
19.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
19.5
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
19.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
19.4
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
19.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
19.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
19.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
19.2
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
19.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
19.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
19.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
19.1
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
19.0
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
19.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
19.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
18.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
18.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
18.7
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
18.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
18.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
18.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
18.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
18.5
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
18.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
18.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
18.4
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
18.4
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
18.3
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
18.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
18.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
18.2
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
18.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
18.2
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
18.1
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
18.0
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
18.0
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
18.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
17.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
17.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
17.9
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
17.9
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
17.8
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
17.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
17.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
17.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
17.6
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
17.5
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
17.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
17.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
17.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
17.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
17.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
17.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
17.3
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
17.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
17.2
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
17.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
17.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
17.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
17.0
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
17.0
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
17.0
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
16.9
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
16.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
16.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
16.7
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
16.6
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
16.4
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
16.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
16.3
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
16.2
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
16.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
16.1
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
16.1
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
16.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
15.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
15.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
15.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
15.9
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
15.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
15.8
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
15.7
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
15.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
15.7
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
15.6
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
15.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
15.4
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
15.4
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
15.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
15.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
15.3
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
15.3
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
15.2
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
15.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
14.9
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
14.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
14.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
14.6
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
14.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
14.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
14.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
14.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
14.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
14.1
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
14.0
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
13.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
13.7
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
13.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
13.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
13.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
13.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
13.1
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
13.1
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
13.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
12.8
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
12.8
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
12.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
12.8
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
12.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
12.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
12.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
12.6
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
12.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
12.4
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
12.4
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
12.2
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
12.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
11.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
11.8
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
11.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
11.8
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
11.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
11.4
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
11.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
11.2
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
10.9
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
10.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
10.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
10.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
10.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
10.2
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
9.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
9.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
9.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
9.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
9.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
9.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
9.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
8.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
8.4
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
8.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
7.9
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
7.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
7.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
6.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
6.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
6.2
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
5.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
5.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MACF1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.7
Number of samples
231
Samples
Sample
Description
TPM
DO45297
0 years, female, NA, stage:4, dead, 1260 days
28.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
26.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
25.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
20.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
20.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
20.0
DO45273
0 years, male, NA, stage:2, alive, 480 days
18.8
DO48720
0 years, female, NA, stage:2, alive, 570 days
18.6
DO48733
0 years, male, NA, stage:2, alive, 600 days
18.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
18.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
18.2
DO45207
0 years, male, NA, stage:1, alive, 1050 days
17.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
17.4
DO45287
0 years, male, NA, stage:1, alive, 390 days
17.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
16.9
DO45189
0 years, female, NA, stage:2, alive, 1200 days
16.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
16.7
DO23534
0 years, male, NA, stage:2, alive, 840 days
16.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
16.4
DO23530
0 years, male, NA, stage:4, dead, 180 days
15.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
15.8
DO45225
0 years, male, NA, stage:1, alive, 1050 days
15.7
DO45277
0 years, male, NA, stage:3, alive, 600 days
15.6
DO45139
0 years, male, NA, stage:3, alive, 1320 days
15.4
DO45113
0 years, male, NA, stage:3, alive, 1560 days
15.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
15.3
DO45233
0 years, male, NA, stage:3, alive, 900 days
14.9
DO23523
0 years, male, NA, stage:3, alive, 1080 days
14.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
14.5
DO45185
0 years, male, NA, stage:2, alive, 600 days
14.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
14.5
DO45159
0 years, male, NA, stage:3, alive, 1470 days
14.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
14.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
14.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
13.9
DO45157
0 years, male, NA, stage:2, alive, 1980 days
13.9
DO23542
0 years, male, NA, stage:3, alive, 960 days
13.6
DO45177
0 years, female, NA, stage:3, alive, 1260 days
13.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
13.5
DO45307
0 years, female, NA, stage:4, dead, 240 days
13.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
13.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
13.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
13.2
DO50787
0 years, male, NA, stage:3, alive, 480 days
13.1
DO45197
0 years, male, NA, stage:2, alive, 1170 days
13.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
13.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
12.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
12.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
12.5
DO45203
0 years, female, NA, stage:2, alive, 1170 days
12.5
DO50803
0 years, female, NA, stage:1, alive, 540 days
12.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
12.4
DO45141
0 years, male, NA, stage:2, alive, 1320 days
12.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
12.3
DO45127
0 years, male, NA, stage:3, dead, 420 days
12.3
DO45137
0 years, male, NA, stage:1, alive, 1320 days
12.3
DO23544
0 years, male, NA, stage:2, alive, 960 days
12.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
12.3
DO45213
0 years, male, NA, stage:1, alive, 1200 days
12.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
12.2
DO23521
0 years, male, NA, stage:3, alive, 1110 days
12.2
DO45215
0 years, male, NA, stage:2, alive, 1170 days
12.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
12.0
DO23536
0 years, male, NA, stage:2, alive, 930 days
12.0
DO45201
0 years, male, NA, stage:1, alive, 900 days
11.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
11.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
11.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
11.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
11.5
DO48730
0 years, female, NA, stage:2, alive, 630 days
11.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
11.4
DO45111
0 years, male, NA, stage:2, alive, 1590 days
11.3
DO45263
0 years, male, NA, stage:3, dead, 270 days
11.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
11.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
11.1
DO50819
0 years, female, NA, stage:2, alive, 510 days
11.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
11.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
11.0
DO48700
0 years, female, NA, stage:2, alive, 810 days
11.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
10.8
DO45259
0 years, male, NA, stage:3, alive, 330 days
10.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
10.5
DO23532
0 years, female, NA, stage:1, alive, 960 days
10.5
DO50776
0 years, male, NA, stage:1, alive, 690 days
10.4
DO50774
0 years, female, NA, stage:2, alive, 720 days
10.3
DO48719
0 years, male, NA, stage:2, alive, 690 days
10.3
DO45135
0 years, male, NA, stage:1, alive, 1410 days
10.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
10.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
10.2
DO23546
0 years, male, NA, stage:2, alive, 1050 days
10.1
DO23514
0 years, male, NA, stage:2, alive, 1290 days
10.1
DO45217
0 years, female, NA, stage:3, dead, 270 days
10.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
10.1
DO48746
0 years, male, NA, stage:3, alive, 570 days
10.0
DO45121
0 years, male, NA, stage:3, alive, 1530 days
9.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
9.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
9.8
DO50806
0 years, male, NA, stage:4, alive, 540 days
9.8
DO45235
0 years, female, NA, stage:1, alive, 900 days
9.8
DO50791
0 years, female, NA, stage:1, dead, 480 days
9.6
DO23516
0 years, male, NA, stage:3, dead, 20 days
9.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
9.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
9.5
DO45117
0 years, female, NA, stage:2, dead, 1110 days
9.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
9.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
9.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
9.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
9.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
9.2
DO23551
0 years, male, NA, stage:3, dead, 150 days
9.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
9.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
9.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
9.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
9.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
9.0
DO45103
0 years, male, NA, stage:3, alive, 450 days
8.9
DO45181
0 years, female, NA, stage:2, alive, 1200 days
8.9
DO45149
0 years, female, NA, stage:2, alive, 1260 days
8.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
8.9
DO45305
0 years, male, NA, stage:4, alive, 300 days
8.7
DO50793
0 years, male, NA, stage:4, alive, 540 days
8.6
DO45173
0 years, male, NA, stage:3, alive, 1170 days
8.6
DO23552
0 years, female, NA, stage:1, alive, 810 days
8.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
8.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
8.5
DO50844
0 years, male, NA, stage:4, alive, 300 days
8.4
DO50802
0 years, male, NA, stage:2, alive, 930 days
8.3
DO45161
0 years, male, NA, stage:2, dead, 540 days
8.2
DO23543
0 years, male, NA, stage:2, alive, 1020 days
8.2
DO50813
0 years, male, NA, stage:2, alive, 420 days
8.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
8.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
8.1
DO45123
0 years, female, NA, stage:2, dead, 570 days
8.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
8.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
8.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
8.0
DO50840
0 years, male, NA, stage:2, alive, 330 days
7.9
DO23541
0 years, male, NA, stage:2, alive, 930 days
7.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
7.9
DO45255
0 years, male, NA, stage:3, alive, 720 days
7.9
DO48697
0 years, female, NA, stage:2, dead, 810 days
7.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
7.8
DO45195
0 years, male, NA, stage:1, alive, 390 days
7.8
DO45133
0 years, male, NA, stage:3, dead, 660 days
7.8
DO48672
0 years, male, NA, stage:2, alive, 450 days
7.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
7.7
DO23519
0 years, male, NA, stage:3, alive, 630 days
7.7
DO48677
0 years, male, NA, stage:3, alive, 1140 days
7.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
7.6
DO45179
0 years, female, NA, stage:2, alive, 600 days
7.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
7.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
7.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
7.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
7.4
DO23512
0 years, male, NA, stage:1, alive, 1260 days
7.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
7.3
DO45101
0 years, male, NA, stage:2, alive, 1680 days
7.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
7.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
7.2
DO45229
0 years, male, NA, stage:1, alive, 990 days
7.2
DO23548
0 years, female, NA, stage:1, alive, 840 days
7.2
DO50829
0 years, male, NA, stage:3, alive, 570 days
7.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
7.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
7.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
7.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
7.1
DO45247
0 years, female, NA, stage:2, alive, 210 days
7.1
DO48716
0 years, male, NA, stage:2, alive, 720 days
7.0
DO45261
0 years, male, NA, stage:3, alive, 990 days
7.0
DO23511
0 years, female, NA, stage:3, dead, 180 days
6.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
6.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
6.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
6.8
DO50859
0 years, male, NA, stage:2, alive, 180 days
6.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
6.7
DO23510
0 years, female, NA, stage:2, alive, 870 days
6.7
DO45187
0 years, female, NA, stage:1, alive, 1260 days
6.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
6.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
6.4
DO50855
0 years, male, NA, stage:2, alive, 570 days
6.4
DO50818
0 years, male, NA, stage:2, alive, 510 days
6.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
6.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
6.3
DO48737
0 years, male, NA, stage:1, alive, 720 days
6.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
6.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
6.2
DO45175
0 years, male, NA, stage:2, alive, 1140 days
6.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
6.1
DO227801
0 years, female, NA, stage:1, alive, 660 days
6.1
DO23528
0 years, female, NA, stage:2, alive, 1020 days
6.1
DO48701
0 years, male, NA, stage:2, alive, 780 days
6.0
DO48742
0 years, male, NA, stage:2, alive, 600 days
6.0
DO50811
0 years, male, NA, stage:1, alive, 450 days
5.7
DO50814
0 years, male, NA, stage:3, alive, 420 days
5.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
5.7
DO48682
0 years, female, NA, stage:3, dead, 120 days
5.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
5.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
5.6
DO45257
0 years, male, NA, stage:3, alive, 810 days
5.6
DO45145
0 years, male, NA, stage:3, dead, 60 days
5.6
DO48693
0 years, male, NA, stage:2, alive, 900 days
5.5
DO23508
0 years, female, NA, stage:2, alive, 390 days
5.4
DO48760
0 years, female, NA, stage:2, alive, 690 days
5.3
DO50789
0 years, female, NA, stage:2, alive, 570 days
5.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
5.2
DO50785
0 years, male, NA, stage:4, dead, 90 days
5.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
5.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
5.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
5.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
4.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
4.9
DO23525
0 years, male, NA, stage:4, alive, 1050 days
4.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
4.7
DO45093
0 years, male, NA, stage:2, dead, 720 days
4.7
DO50857
0 years, male, NA, stage:2, alive, 210 days
4.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
4.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
4.7
DO48759
0 years, male, NA, stage:3, alive, 720 days
4.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
4.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
4.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
4.5
DO48679
0 years, male, NA, stage:2, alive, 1200 days
4.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
4.3
DO48715
0 years, female, NA, stage:2, dead, 690 days
4.2
DO23533
0 years, male, NA, stage:2, alive, 900 days
4.2
DO45169
0 years, male, NA, stage:3, alive, 1350 days
4.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
4.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
4.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
3.7
DO50839
0 years, female, NA, stage:3, alive, 330 days
3.7
DO23545
0 years, male, NA, stage:2, dead, 570 days
3.7
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
527
Tumor
0.8
957
Tumor
0.8
545
Tumor
0.7
125
Tumor
0.6
425
Tumor
0.5
647
Tumor
0.5
283
Tumor
0.5
513
Tumor
0.5
943
Tumor
0.4
737
Tumor
0.4
685
Tumor
0.4
925
Tumor
0.4
537
Tumor
0.3
536
Normal
0.3
546
Normal
0.3
137
Tumor
0.3
865
Tumor
0.3
937
Tumor
0.3
824
Normal
0.3
1014
Normal
0.3
482
Normal
0.3
746
Normal
0.3
915
Tumor
0.3
478
Normal
0.3
257
Tumor
0.3
964
Normal
0.3
938
Normal
0.2
723
Tumor
0.2
742
Normal
0.2
778
Normal
0.2
515
Tumor
0.2
484
Normal
0.2
488
Normal
0.2
355
Tumor
0.2
882
Normal
0.2
1022
Normal
0.2
448
Normal
0.2
924
Normal
0.2
958
Normal
0.2
696
Normal
0.2
966
Normal
0.2
554
Normal
0.2
786
Normal
0.2
858
Normal
0.2
472
Normal
0.2
462
Normal
0.2
1032
Normal
0.2
912
Normal
0.2
412
Normal
0.2
916
Normal
0.2
524
Normal
0.2
534
Normal
0.2
686
Normal
0.2
1026
Normal
0.2
1046
Normal
0.2
922
Normal
0.2
431
Tumor
0.2
395
Tumor
0.2
698
Normal
0.2
777
Tumor
0.2
142
Normal
0.2
492
Normal
0.2
436
Normal
0.2
343
Tumor
0.2
498
Normal
0.2
944
Normal
0.2
538
Normal
0.2
616
Normal
0.2
852
Normal
0.2
311
Tumor
0.2
636
Normal
0.2
982
Normal
0.2
314
Normal
0.2
356
Normal
0.2
878
Normal
0.2
465
Tumor
0.2
818
Normal
0.2
738
Normal
0.2
342
Normal
0.2
494
Normal
0.2
862
Normal
0.2
866
Normal
0.2
222
Normal
0.2
487
Tumor
0.2
528
Normal
0.2
298
Normal
0.2
618
Normal
0.2
722
Normal
0.2
648
Normal
0.2
756
Normal
0.2
861
Tumor
0.2
514
Normal
0.2
984
Normal
0.2
952
Normal
0.2
868
Normal
0.2
976
Normal
0.2
328
Normal
0.2
953
Tumor
0.1
474
Normal
0.1
1044
Normal
0.1
714
Normal
0.1
387
Tumor
0.1
864
Normal
0.1
421
Tumor
0.1
1027
Tumor
0.1
926
Normal
0.1
162
Normal
0.1
432
Normal
0.1
364
Normal
0.1
956
Normal
0.1
954
Normal
0.1
427
Tumor
0.1
713
Tumor
0.1
563
Tumor
0.1
981
Tumor
0.1
132
Normal
0.1
341
Tumor
0.1
284
Normal
0.1
228
Normal
0.1
211
Tumor
0.1
558
Normal
0.1
1016
Normal
0.1
1045
Tumor
0.1
1028
Normal
0.1
526
Normal
0.1
728
Normal
0.1
874
Normal
0.1
451
Tumor
0.1
744
Normal
0.1
568
Normal
0.1
572
Normal
0.1
918
Normal
0.1
978
Normal
0.1
196
Normal
0.1
444
Normal
0.1
716
Normal
0.1
423
Tumor
0.1
497
Tumor
0.1
461
Tumor
0.1
1042
Normal
0.1
968
Normal
0.1
212
Normal
0.1
873
Tumor
0.1
516
Normal
0.1
518
Normal
0.1
533
Tumor
0.1
332
Normal
0.1
146
Normal
0.1
816
Normal
0.1
286
Normal
0.1
186
Normal
0.1
114
Normal
0.1
145
Tumor
0.1
258
Normal
0.1
128
Normal
0.1
867
Tumor
0.1
466
Normal
0.1
745
Tumor
0.1
464
Normal
0.1
574
Normal
0.1
923
Tumor
0.1
573
Tumor
0.1
376
Normal
0.1
477
Tumor
0.1
354
Normal
0.1
481
Tumor
0.1
884
Normal
0.1
663
Tumor
0.1
112
Tumor
0.1
468
Normal
0.1
456
Normal
0.1
394
Normal
0.1
136
Normal
0.1
422
Normal
0.1
672
Normal
0.1
426
Normal
0.1
416
Normal
0.1
813
Tumor
0.1
628
Normal
0.1
195
Tumor
0.1
124
Normal
0.1
662
Normal
0.0
428
Normal
0.0
415
Tumor
0.0
414
Normal
0.0
883
Tumor
0.0
666
Normal
0.0
564
Normal
0.0
446
Normal
0.0
857
Tumor
0.0
1025
Tumor
0.0
388
Normal
0.0
224
Normal
0.0
424
Normal
0.0
642
Normal
0.0
483
Tumor
0.0
214
Normal
0.0
172
Normal
0.0
278
Normal
0.0
383
Tumor
0.0
1021
Tumor
0.0
358
Normal
0.0
111
Normal
0.0
344
Normal
0.0
455
Tumor
0.0
384
Normal
0.0
148
Normal
0.0
232
Normal
0.0
785
Tumor
0.0
313
Tumor
0.0
192
Normal
0.0
368
Normal
0.0
452
Normal
0.0
277
Tumor
0.0
312
Normal
0.0
268
Normal
0.0
138
Normal
0.0
917
Tumor
0.0
434
Normal
0.0
188
Normal
0.0
664
Normal
0.0
161
Tumor
0.0
493
Tumor
0.0
375
Tumor
0.0
721
Tumor
0.0
367
Tumor
0.0
272
Normal
0.0
823
Tumor
0.0
525
Tumor
0.0
396
Normal
0.0
185
Tumor
0.0
392
Normal
0.0
141
Tumor
0.0
366
Normal
0.0
213
Tumor
0.0
447
Tumor
0.0
126
Normal
0.0
352
Normal
0.0
697
Tumor
0.0
435
Tumor
0.0
755
Tumor
0.0
297
Tumor
0.0
617
Tumor
0.0
463
Tumor
0.0
965
Tumor
0.0
386
Normal
0.0
218
Normal
0.0
955
Tumor
0.0
443
Tumor
0.0
913
Tumor
0.0
365
Tumor
0.0
362
Normal
0.0
433
Tumor
0.0
741
Tumor
0.0
914
Normal
0.0
445
Tumor
0.0
1015
Tumor
0.0
393
Tumor
0.0
1013
Tumor
0.0
615
Tumor
-0.1
814
Normal
-0.1
223
Tumor
-0.1
231
Tumor
-0.1
353
Tumor
-0.1
413
Tumor
-0.1
261
Tumor
-0.1
851
Tumor
-0.1
727
Tumor
-0.1
262
Normal
-0.1
473
Tumor
-0.1
627
Tumor
-0.1
361
Tumor
-0.1
977
Tumor
-0.1
467
Tumor
-0.1
661
Tumor
-0.1
123
Tumor
-0.1
635
Tumor
-0.1
911
Tumor
-0.1
327
Tumor
-0.2
983
Tumor
-0.2
391
Tumor
-0.2
491
Tumor
-0.2
535
Tumor
-0.2
411
Tumor
-0.2
724
Normal
-0.2
815
Tumor
-0.2
863
Tumor
-0.2
171
Tumor
-0.2
331
Tumor
-0.2
557
Tumor
-0.2
881
Tumor
-0.2
571
Tumor
-0.2
1041
Tumor
-0.2
217
Tumor
-0.2
695
Tumor
-0.2
357
Tumor
-0.2
1043
Tumor
-0.3
567
Tumor
-0.3
135
Tumor
-0.3
131
Tumor
-0.3
147
Tumor
-0.3
951
Tumor
-0.3
471
Tumor
-0.3
285
Tumor
-0.3
363
Tumor
-0.3
523
Tumor
-0.3
191
Tumor
-0.3
227
Tumor
-0.4
127
Tumor
-0.4
671
Tumor
-0.4
743
Tumor
-0.4
975
Tumor
-0.4
665
Tumor
-0.4
963
Tumor
-0.4
967
Tumor
-0.4
113
Tumor
-0.4
817
Tumor
-0.4
267
Tumor
-0.4
715
Tumor
-0.4
187
Tumor
-0.4
351
Tumor
-0.5
1031
Tumor
-0.5
385
Tumor
-0.5
921
Tumor
-0.5
553
Tumor
-0.5
517
Tumor
-0.6
221
Tumor
-0.6
271
Tumor
-0.6
877
Tumor
-0.7
641
Tumor
-0.7
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
