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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PLEKHG3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
62.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
51.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
50.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
46.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
45.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
43.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
39.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
39.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
38.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
37.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
35.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
34.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
34.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
32.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
32.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
32.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
31.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
30.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
30.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
30.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
30.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
29.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
29.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
28.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
28.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
27.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
26.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
25.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
25.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
24.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
24.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
24.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
23.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
23.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
22.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
22.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
21.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
21.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
21.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
21.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
21.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
20.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
19.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
19.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
19.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
18.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
18.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
17.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
16.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
16.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
14.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
14.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
13.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
13.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
13.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
13.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
13.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
12.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
12.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
9.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
8.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
5.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
4.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PLEKHG3 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
60.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
49.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
46.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
44.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
43.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
43.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
39.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
39.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
39.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
37.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
37.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
37.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
37.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
36.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
36.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
35.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
34.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
33.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
33.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
33.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
32.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
32.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
31.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
31.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
31.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
30.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
30.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
30.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
29.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
29.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
29.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
28.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
28.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
28.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
28.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
28.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
28.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
28.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
27.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
27.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
27.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
27.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
27.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
27.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
27.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
27.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
27.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
26.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
26.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
26.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
26.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
26.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
26.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
25.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
25.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
25.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
25.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
25.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
25.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
24.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
24.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
24.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
24.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
24.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
24.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
24.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
24.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
24.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
24.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
24.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
23.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
23.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
23.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
23.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
23.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
23.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
22.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
22.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
22.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
22.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
22.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
22.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
22.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
22.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
22.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
22.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
21.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
21.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
21.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
21.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
21.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
21.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
21.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
21.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
20.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
20.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
20.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
20.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
20.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
20.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
20.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
20.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
20.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
20.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
20.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
20.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
20.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
20.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
20.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
20.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
20.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
19.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
19.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
19.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
19.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
19.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
19.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
19.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
19.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
19.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
19.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
19.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
19.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
19.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
18.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
18.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
18.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
18.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
18.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
18.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
18.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
18.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
18.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
18.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
18.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
18.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
18.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
18.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
18.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
18.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
17.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
17.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
17.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
17.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
17.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
17.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
17.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
17.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
17.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
17.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
17.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
17.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
17.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
17.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
17.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
17.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
17.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
17.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
17.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
17.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
17.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
16.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
16.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
16.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
16.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
16.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
16.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
16.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
16.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
16.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
16.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
16.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
16.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
16.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
16.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
16.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
16.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
16.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
16.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
15.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
15.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
15.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
15.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
15.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
15.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
15.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
15.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
15.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
15.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
15.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
15.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
15.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
15.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
15.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
15.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
15.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
15.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
15.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
15.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
15.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
15.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
14.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
14.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
14.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
14.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
14.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
14.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
14.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
14.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
14.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
14.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
14.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
14.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
14.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
14.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
14.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
14.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
14.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
14.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
14.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
14.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
14.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
13.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
13.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
13.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
13.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
13.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
13.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
13.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
13.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
13.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
13.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
13.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
13.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
13.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
13.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
13.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
13.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
13.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
13.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
13.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
13.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
13.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
13.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
13.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
13.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
13.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
13.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
13.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
13.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
13.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
13.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
13.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
12.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
12.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
12.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
12.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
12.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
12.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
12.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
12.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
12.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
12.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
12.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
12.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
12.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
12.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
12.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
12.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
12.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
12.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
12.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
12.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
12.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
12.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
12.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
12.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
12.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
12.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
12.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
12.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
11.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
11.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
11.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
11.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
11.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
11.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
11.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
11.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
11.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
11.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
11.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
11.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
11.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
11.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
11.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
11.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
11.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
11.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
11.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
11.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
11.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
11.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
11.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
11.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
11.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
11.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
11.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
11.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
11.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
11.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
11.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
11.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
11.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
11.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
10.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
10.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
10.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
10.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
10.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
10.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
10.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
10.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
10.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
10.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
10.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
10.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
10.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
10.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
10.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
10.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
10.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
10.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
10.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
10.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
10.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
10.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
10.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
10.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
10.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
10.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
10.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
10.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
10.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
10.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
10.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
10.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
10.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
10.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
9.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
9.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
9.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
9.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
9.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
9.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
9.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
9.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
9.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
9.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
9.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
9.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
9.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
9.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
9.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
9.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
9.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
9.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
9.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
9.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
9.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
9.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
9.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
9.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
9.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
9.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
9.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
9.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
9.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
8.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
8.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
8.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
8.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
8.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
8.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
8.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
8.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
8.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
8.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
8.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
8.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
8.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
8.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
8.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
8.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
8.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
8.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
8.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
8.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
8.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
8.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
8.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
8.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
8.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
8.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
8.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
8.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
8.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
8.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
8.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
8.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
8.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
7.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
7.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
7.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
7.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
7.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
7.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
7.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
7.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
7.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
7.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
7.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
7.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
7.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
7.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
7.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
7.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
7.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
7.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
7.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
7.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
7.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
7.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
6.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
6.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
6.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
6.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
6.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
6.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
6.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
6.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
6.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
6.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
6.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
6.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
6.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
6.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
6.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
6.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
6.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
6.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
6.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
6.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
6.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
6.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
6.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
6.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
6.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
6.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
6.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
6.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
5.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
5.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
5.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
5.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
5.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
5.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
5.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
5.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
5.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
5.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
5.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
5.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
5.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
5.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
5.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
5.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
5.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
5.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
5.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
4.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
4.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
4.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
4.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
4.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
4.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
4.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
4.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
4.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
4.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
4.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
4.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
4.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
4.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
4.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
4.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
4.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
4.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
3.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
3.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
3.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
3.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
3.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
3.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
2.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
2.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
2.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
2.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
2.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
2.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
2.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
2.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
1.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
1.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
1.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
1.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PLEKHG3 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
87.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
61.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
47.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
46.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
38.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
37.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
35.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
34.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
34.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
33.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
31.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
30.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
29.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
28.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
28.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
28.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
27.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
26.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
26.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
25.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
25.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
24.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
24.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
24.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
24.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
24.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
23.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
23.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
23.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
23.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
23.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
22.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
22.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
22.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
22.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
22.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
22.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
22.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
21.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
21.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
21.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
20.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
20.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
19.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
19.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
19.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
19.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
19.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
18.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
18.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
18.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
17.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
17.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
17.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
16.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
16.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
16.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
15.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
15.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
15.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
15.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
14.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
14.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
14.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
14.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
14.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
13.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
13.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
13.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
12.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
12.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
12.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
11.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
11.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
11.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
11.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
11.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
10.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
10.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
10.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
10.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
9.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
9.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
9.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
9.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
8.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
8.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
8.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
8.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
8.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
7.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
7.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
7.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
7.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
6.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
5.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
5.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
5.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PLEKHG3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
137.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
99.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
83.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
82.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
79.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
78.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
76.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
74.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
72.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
69.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
68.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
65.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
64.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
64.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
61.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
59.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
59.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
59.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
59.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
57.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
55.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
54.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
54.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
53.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
52.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
52.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
52.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
51.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
51.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
50.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
50.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
50.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
50.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
49.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
49.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
49.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
48.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
48.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
47.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
47.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
46.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
46.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
45.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
45.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
45.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
45.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
45.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
44.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
44.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
44.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
44.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
44.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
44.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
43.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
43.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
43.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
43.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
43.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
43.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
42.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
41.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
41.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
40.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
40.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
40.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
38.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
38.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
38.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
38.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
38.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
37.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
36.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
36.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
36.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
36.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
36.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
36.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
36.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
36.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
36.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
35.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
35.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
35.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
35.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
34.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
34.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
34.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
34.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
34.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
34.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
34.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
34.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
34.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
34.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
34.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
34.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
33.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
33.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
33.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
33.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
32.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
32.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
32.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
32.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
32.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
31.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
30.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
30.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
30.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
30.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
30.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
30.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
30.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
30.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
30.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
30.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
30.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
30.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
30.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
29.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
29.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
29.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
29.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
29.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
29.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
29.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
29.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
29.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
29.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
28.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
28.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
28.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
28.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
28.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
28.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
28.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
28.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
28.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
28.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
28.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
28.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
27.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
27.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
27.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
27.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
27.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
27.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
27.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
27.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
26.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
26.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
26.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
26.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
26.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
26.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
26.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
26.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
25.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
25.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
25.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
25.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
25.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
25.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
25.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
25.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
24.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
24.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
24.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
24.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
24.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
24.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
24.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
24.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
24.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
23.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
23.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
23.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
23.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
23.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
23.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
23.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
23.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
22.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
22.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
22.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
22.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
22.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
22.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
22.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
22.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
21.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
21.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
21.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
21.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
21.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
20.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
20.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
20.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
20.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
20.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
20.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
20.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
20.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
20.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
20.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
19.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
19.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
19.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
19.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
19.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
19.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
19.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
18.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
18.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
18.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
18.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
18.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
18.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
18.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
18.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
17.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
17.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
17.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
17.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
17.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
17.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
16.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
16.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
16.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
16.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
16.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
16.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
16.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
16.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
16.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
16.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
16.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
16.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
16.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
16.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
15.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
15.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
15.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
15.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
15.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
15.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
15.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
15.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
14.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
14.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
14.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
14.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
14.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
12.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
12.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
12.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
12.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
12.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
12.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
11.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
11.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
11.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
11.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
11.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
11.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
11.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
10.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
10.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
9.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
9.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
9.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
9.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
9.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
9.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
8.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
7.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
7.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
7.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
5.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
5.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
5.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
5.4
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088970003
Tumor
1.1
CPT0012770003
Normal
0.8
CPT0012570003
Normal
0.8
CPT0012090003
Normal
0.7
CPT0007870001
Normal
0.6
CPT0065450001
Normal
0.6
CPT0023360001
Normal
0.5
CPT0001230001
Normal
0.5
CPT0077500001
Normal
0.5
CPT0079430001
Normal
0.5
CPT0063640001
Normal
0.5
CPT0012640003
Normal
0.5
CPT0079300001
Normal
0.5
CPT0010170001
Normal
0.5
CPT0000790001
Normal
0.5
CPT0001350001
Normal
0.5
CPT0077140001
Normal
0.5
CPT0078530001
Normal
0.5
CPT0009080003
Normal
0.5
CPT0092800003
Normal
0.5
CPT0087050003
Normal
0.5
CPT0025060001
Normal
0.5
CPT0079510001
Normal
0.4
CPT0025610001
Normal
0.4
CPT0078940001
Normal
0.4
CPT0088500001
Normal
0.4
CPT0020130001
Normal
0.4
CPT0086970003
Normal
0.4
CPT0088920001
Normal
0.4
CPT0081620001
Normal
0.4
CPT0026420001
Normal
0.4
CPT0001270001
Normal
0.4
CPT0079000001
Normal
0.4
CPT0001190001
Normal
0.4
CPT0076350001
Normal
0.4
CPT0007470001
Normal
0.4
CPT0012290003
Normal
0.4
CPT0020020001
Normal
0.4
CPT0014350001
Normal
0.4
CPT0001510001
Normal
0.4
CPT0086890003
Normal
0.4
CPT0019160001
Normal
0.4
CPT0018250001
Normal
0.4
CPT0088780001
Normal
0.4
CPT0066430001
Normal
0.4
CPT0069010001
Normal
0.4
CPT0086830003
Normal
0.4
CPT0013790003
Normal
0.3
CPT0082010001
Normal
0.3
CPT0023710001
Normal
0.3
CPT0017450001
Normal
0.3
CPT0012920003
Normal
0.3
CPT0006730001
Normal
0.3
CPT0063330001
Normal
0.3
CPT0086370003
Normal
0.3
CPT0075570001
Normal
0.3
CPT0009020003
Normal
0.3
CPT0092740003
Normal
0.3
CPT0025920001
Normal
0.3
CPT0064400001
Normal
0.3
CPT0088640003
Normal
0.3
CPT0078670001
Normal
0.3
CPT0088710001
Normal
0.3
CPT0089480003
Normal
0.3
CPT0000890001
Normal
0.3
CPT0089040001
Normal
0.3
CPT0001550001
Normal
0.3
CPT0002370001
Normal
0.3
CPT0078840001
Normal
0.3
CPT0006950001
Normal
0.3
CPT0000660001
Normal
0.3
CPT0088570001
Normal
0.3
CPT0069000003
Tumor
0.3
CPT0010120001
Normal
0.3
CPT0006530001
Normal
0.2
CPT0065820001
Normal
0.2
CPT0092310003
Normal
0.2
CPT0014130001
Normal
0.2
CPT0075170001
Normal
0.2
CPT0019130003
Tumor
0.2
CPT0066520001
Normal
0.2
CPT0077310003
Tumor
0.2
CPT0014470001
Normal
0.2
CPT0069190001
Normal
0.2
CPT0007320003
Tumor
0.2
CPT0025580004
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0092190003
Normal
0.1
CPT0001500009
Tumor
0.0
CPT0078660003
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0078930003
Tumor
0.0
CPT0078800003
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0000870016
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0002270011
Tumor
0.0
CPT0065430003
Tumor
0.0
CPT0079180003
Tumor
-0.1
CPT0079480003
Tumor
-0.1
CPT0020120003
Tumor
-0.1
CPT0081990003
Tumor
-0.1
CPT0089460004
Tumor
-0.1
CPT0011410003
Tumor
-0.1
CPT0077320001
Normal
-0.1
CPT0088480003
Tumor
-0.1
CPT0006900003
Tumor
-0.1
CPT0065750003
Tumor
-0.2
CPT0064370003
Tumor
-0.2
CPT0023690003
Tumor
-0.2
CPT0006630003
Tumor
-0.2
CPT0026410003
Tumor
-0.2
CPT0014370004
Tumor
-0.2
CPT0014160003
Tumor
-0.2
CPT0012900004
Tumor
-0.3
CPT0071150004
Tumor
-0.3
CPT0088900003
Tumor
-0.3
CPT0086870003
Tumor
-0.3
CPT0014450004
Tumor
-0.3
CPT0065810003
Tumor
-0.3
CPT0079380003
Tumor
-0.3
CPT0086360003
Tumor
-0.3
CPT0015730003
Tumor
-0.3
CPT0015910003
Tumor
-0.3
CPT0092790003
Tumor
-0.3
CPT0066470004
Tumor
-0.4
CPT0015810003
Tumor
-0.4
CPT0025290003
Tumor
-0.4
CPT0000780007
Tumor
-0.4
CPT0075560003
Tumor
-0.4
CPT0089020003
Tumor
-0.4
CPT0006440003
Tumor
-0.4
CPT0078510003
Tumor
-0.4
CPT0001220008
Tumor
-0.4
CPT0065870003
Tumor
-0.4
CPT0066480003
Tumor
-0.4
CPT0086030003
Tumor
-0.4
CPT0084560003
Tumor
-0.5
CPT0078990003
Tumor
-0.5
CPT0088760003
Tumor
-0.5
CPT0001260009
Tumor
-0.5
CPT0079270003
Tumor
-0.5
CPT0092730003
Tumor
-0.5
CPT0088690003
Tumor
-0.5
CPT0010110003
Tumor
-0.5
CPT0075720003
Tumor
-0.5
CPT0077490003
Tumor
-0.5
CPT0086950003
Tumor
-0.5
CPT0079410003
Tumor
-0.6
CPT0017850003
Tumor
-0.6
CPT0019990003
Tumor
-0.6
CPT0007860003
Tumor
-0.6
CPT0086820003
Tumor
-0.6
CPT0009060003
Tumor
-0.6
CPT0065930003
Tumor
-0.6
CPT0079230003
Tumor
-0.6
CPT0075130003
Tumor
-0.7
CPT0025350003
Tumor
-0.7
CPT0077110003
Tumor
-0.7
CPT0021240003
Tumor
-0.7
CPT0063630003
Tumor
-0.7
CPT0002350011
Tumor
-0.7
CPT0092290003
Tumor
-0.7
CPT0009000003
Tumor
-0.7
CPT0081600003
Tumor
-0.7
CPT0000640003
Tumor
-0.7
CPT0001180009
Tumor
-0.7
CPT0025230003
Tumor
-0.8
CPT0025050003
Tumor
-0.8
CPT0017410003
Tumor
-0.8
CPT0069160003
Tumor
-0.8
CPT0088630003
Tumor
-0.9
CPT0076330003
Tumor
-0.9
CPT0092160003
Tumor
-0.9
CPT0078830003
Tumor
-0.9
CPT0085670003
Tumor
-0.9
CPT0012280003
Tumor
-0.9
CPT0010160003
Tumor
-0.9
CPT0011240003
Tumor
-1.0
CPT0001540009
Tumor
-1.0
CPT0023350003
Tumor
-1.0
CPT0001340003
Tumor
-1.0
CPT0025880003
Tumor
-1.0
CPT0025110003
Tumor
-1.0
CPT0012670003
Tumor
-1.1
CPT0065690003
Tumor
-1.2
CPT0012180003
Tumor
-1.3
CPT0012080003
Tumor
-1.3
CPT0012370003
Tumor
-1.4
CPT0081880003
Tumor
-1.4
CPT0088550004
Tumor
-1.4
CPT0024670003
Tumor
-1.4
CPT0012550003
Tumor
-1.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
