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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SBDS is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
57.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
127.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
126.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
123.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
108.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
103.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
97.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
96.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
90.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
90.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
90.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
84.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
83.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
79.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
78.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
77.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
77.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
75.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
74.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
69.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
67.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
60.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
60.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
60.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
59.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
58.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
58.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
57.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
56.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
55.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
54.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
54.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
54.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
53.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
52.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
51.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
51.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
50.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
50.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
49.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
48.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
46.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
46.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
45.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
43.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
43.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
41.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
38.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
37.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
37.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
37.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
35.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
35.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
35.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
34.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
33.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
32.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
31.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
28.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
27.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
17.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
8.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SBDS is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
92.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
329.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
238.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
209.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
180.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
169.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
166.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
164.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
164.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
164.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
160.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
151.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
151.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
148.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
148.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
148.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
148.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
147.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
146.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
146.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
145.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
143.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
143.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
142.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
142.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
140.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
140.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
139.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
138.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
138.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
137.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
137.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
136.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
136.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
136.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
135.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
135.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
135.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
134.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
134.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
134.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
133.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
133.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
133.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
132.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
132.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
131.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
131.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
130.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
129.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
128.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
128.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
127.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
127.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
126.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
126.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
126.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
125.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
125.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
124.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
124.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
124.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
124.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
123.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
123.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
123.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
123.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
123.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
123.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
122.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
122.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
122.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
122.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
122.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
121.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
120.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
120.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
120.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
120.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
120.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
120.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
120.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
120.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
119.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
118.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
118.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
118.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
118.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
117.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
117.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
117.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
117.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
117.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
117.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
117.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
116.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
116.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
115.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
115.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
115.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
114.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
114.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
114.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
114.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
114.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
114.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
113.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
113.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
113.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
113.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
113.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
112.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
112.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
112.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
112.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
112.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
112.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
111.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
111.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
111.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
111.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
111.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
111.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
111.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
111.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
110.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
110.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
110.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
110.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
110.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
110.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
110.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
109.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
109.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
109.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
108.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
108.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
108.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
108.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
108.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
108.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
108.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
108.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
108.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
108.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
107.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
107.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
107.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
107.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
107.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
107.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
107.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
107.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
107.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
107.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
106.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
106.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
106.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
106.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
106.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
106.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
106.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
106.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
105.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
105.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
105.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
105.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
105.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
105.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
105.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
104.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
104.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
104.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
104.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
103.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
103.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
103.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
103.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
103.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
103.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
103.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
103.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
103.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
102.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
102.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
102.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
102.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
102.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
102.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
102.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
101.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
101.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
100.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
100.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
100.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
100.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
100.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
100.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
100.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
100.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
99.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
99.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
99.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
99.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
99.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
99.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
99.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
99.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
99.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
99.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
98.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
98.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
98.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
97.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
97.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
97.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
97.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
97.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
97.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
97.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
96.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
96.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
96.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
96.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
96.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
96.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
96.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
96.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
96.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
96.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
96.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
95.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
95.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
95.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
95.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
95.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
95.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
95.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
94.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
94.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
94.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
94.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
94.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
94.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
94.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
94.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
94.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
93.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
93.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
93.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
93.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
93.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
93.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
93.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
93.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
92.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
92.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
92.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
92.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
92.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
92.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
92.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
92.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
92.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
92.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
92.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
92.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
92.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
91.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
91.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
91.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
90.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
90.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
90.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
90.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
90.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
90.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
90.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
89.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
89.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
89.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
89.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
89.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
89.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
89.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
88.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
88.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
88.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
88.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
88.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
88.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
88.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
87.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
87.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
87.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
87.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
87.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
86.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
86.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
86.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
86.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
86.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
86.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
86.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
86.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
86.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
86.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
86.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
86.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
86.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
86.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
86.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
85.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
85.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
85.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
85.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
85.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
85.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
85.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
84.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
84.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
84.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
84.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
84.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
84.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
83.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
83.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
83.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
83.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
83.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
82.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
82.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
82.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
82.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
82.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
82.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
82.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
82.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
81.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
81.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
81.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
81.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
81.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
80.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
80.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
80.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
80.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
80.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
80.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
80.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
80.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
79.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
79.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
79.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
79.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
79.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
79.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
79.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
79.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
79.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
78.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
78.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
78.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
77.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
77.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
77.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
77.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
77.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
76.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
76.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
76.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
76.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
76.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
76.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
76.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
76.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
76.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
76.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
76.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
76.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
76.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
75.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
75.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
75.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
75.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
75.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
74.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
74.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
74.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
74.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
74.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
74.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
74.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
74.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
73.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
73.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
73.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
73.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
73.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
72.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
72.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
72.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
72.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
71.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
71.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
71.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
70.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
70.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
70.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
70.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
70.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
70.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
70.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
69.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
69.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
69.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
68.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
68.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
68.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
67.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
67.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
67.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
67.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
67.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
67.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
66.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
66.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
66.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
66.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
66.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
66.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
65.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
65.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
65.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
65.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
64.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
64.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
64.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
63.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
63.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
63.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
63.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
63.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
63.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
62.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
62.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
62.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
61.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
61.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
61.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
61.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
61.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
61.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
61.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
61.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
61.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
61.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
60.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
60.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
60.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
60.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
59.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
59.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
59.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
59.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
58.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
56.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
56.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
55.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
55.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
55.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
55.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
54.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
54.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
54.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
53.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
53.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
53.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
52.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
52.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
52.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
52.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
52.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
50.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
50.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
50.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
50.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
50.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
49.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
48.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
46.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
46.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
45.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
44.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
43.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
43.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
43.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
42.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
42.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
42.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
42.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
42.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
40.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
40.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
39.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
39.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
39.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
39.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
37.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
36.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
35.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
33.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
31.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
29.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
27.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
26.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
25.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
25.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
24.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
24.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
20.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SBDS is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
115.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
259.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
206.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
196.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
195.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
182.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
170.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
167.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
158.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
157.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
154.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
154.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
151.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
149.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
145.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
144.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
143.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
143.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
142.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
142.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
142.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
141.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
141.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
138.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
136.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
136.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
136.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
133.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
131.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
131.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
131.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
130.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
129.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
128.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
127.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
127.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
127.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
126.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
122.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
119.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
119.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
119.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
118.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
118.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
118.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
117.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
117.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
117.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
116.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
115.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
114.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
112.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
112.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
112.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
110.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
110.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
108.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
106.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
106.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
105.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
105.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
104.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
104.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
103.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
103.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
103.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
101.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
99.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
99.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
99.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
98.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
98.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
98.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
97.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
97.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
97.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
96.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
95.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
94.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
91.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
90.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
88.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
87.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
85.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
85.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
80.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
80.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
76.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
76.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
76.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
73.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
72.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
70.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
69.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
65.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
64.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
54.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
53.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
50.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SBDS is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
75.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
253.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
235.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
214.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
200.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
186.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
183.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
178.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
177.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
174.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
168.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
160.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
155.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
153.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
151.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
148.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
142.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
141.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
140.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
140.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
139.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
139.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
138.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
137.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
137.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
136.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
135.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
134.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
133.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
132.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
131.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
129.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
129.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
128.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
127.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
127.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
126.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
126.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
126.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
124.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
123.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
121.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
121.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
121.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
121.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
120.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
118.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
117.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
116.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
115.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
115.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
114.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
112.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
110.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
110.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
110.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
108.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
108.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
107.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
107.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
106.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
104.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
103.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
99.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
99.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
98.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
97.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
97.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
97.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
97.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
96.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
95.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
95.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
95.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
95.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
95.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
95.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
95.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
94.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
94.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
93.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
93.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
93.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
92.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
92.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
92.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
91.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
91.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
90.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
90.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
89.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
89.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
89.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
89.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
88.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
88.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
87.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
87.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
87.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
87.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
86.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
86.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
86.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
86.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
86.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
86.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
86.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
85.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
84.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
84.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
84.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
84.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
83.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
83.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
83.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
81.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
81.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
80.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
80.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
80.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
80.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
80.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
80.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
80.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
80.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
79.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
79.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
79.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
78.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
78.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
77.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
77.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
77.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
76.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
76.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
76.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
76.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
76.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
76.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
75.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
75.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
74.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
73.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
73.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
73.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
73.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
72.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
72.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
72.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
71.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
71.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
71.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
71.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
70.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
69.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
68.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
68.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
67.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
67.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
66.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
66.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
66.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
66.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
65.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
65.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
65.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
65.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
65.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
64.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
63.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
62.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
62.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
62.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
61.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
61.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
60.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
59.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
59.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
59.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
58.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
58.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
57.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
57.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
56.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
56.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
56.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
56.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
55.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
55.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
55.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
55.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
54.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
52.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
52.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
51.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
51.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
51.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
50.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
50.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
50.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
50.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
50.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
49.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
49.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
49.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
49.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
49.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
48.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
47.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
47.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
47.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
47.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
47.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
46.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
45.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
45.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
45.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
45.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
44.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
44.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
44.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
44.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
44.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
44.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
44.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
43.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
42.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
42.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
40.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
40.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
40.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
40.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
40.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
39.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
38.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
38.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
37.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
35.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
35.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
35.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
35.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
33.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
32.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
32.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
32.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
31.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
31.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
31.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
30.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
29.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
29.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
28.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
28.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
27.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
24.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
21.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
16.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0084560003
Tumor
0.8
CPT0014450004
Tumor
0.8
CPT0000640003
Tumor
0.7
CPT0086950003
Tumor
0.6
CPT0078830003
Tumor
0.6
CPT0078660003
Tumor
0.6
CPT0012280003
Tumor
0.5
CPT0069000003
Tumor
0.5
CPT0079410003
Tumor
0.5
CPT0017410003
Tumor
0.5
CPT0019130003
Tumor
0.4
CPT0071150004
Tumor
0.4
CPT0010160003
Tumor
0.4
CPT0077110003
Tumor
0.4
CPT0015810003
Tumor
0.4
CPT0011240003
Tumor
0.4
CPT0006440003
Tumor
0.4
CPT0079510001
Normal
0.4
CPT0009060003
Tumor
0.4
CPT0086870003
Tumor
0.4
CPT0085670003
Tumor
0.3
CPT0025580004
Tumor
0.3
CPT0001500009
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0000780007
Tumor
0.3
CPT0007320003
Tumor
0.3
CPT0081600003
Tumor
0.3
CPT0088900003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0089460004
Tumor
0.3
CPT0066480003
Tumor
0.3
CPT0010120001
Normal
0.3
CPT0063320003
Tumor
0.3
CPT0088690003
Tumor
0.3
CPT0089020003
Tumor
0.3
CPT0078800003
Tumor
0.3
CPT0088630003
Tumor
0.3
CPT0025050003
Tumor
0.2
CPT0023350003
Tumor
0.2
CPT0002350011
Tumor
0.2
CPT0015910003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0001270001
Normal
0.2
CPT0001340003
Tumor
0.2
CPT0065430003
Tumor
0.2
CPT0011410003
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0065930003
Tumor
0.2
CPT0076350001
Normal
0.2
CPT0092190003
Normal
0.2
CPT0001540009
Tumor
0.2
CPT0076330003
Tumor
0.2
CPT0009080003
Normal
0.2
CPT0077490003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0078530001
Normal
0.2
CPT0001220008
Tumor
0.2
CPT0006530001
Normal
0.2
CPT0088760003
Tumor
0.2
CPT0079480003
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0012640003
Normal
0.1
CPT0000660001
Normal
0.1
CPT0063640001
Normal
0.1
CPT0075720003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0078990003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0009000003
Tumor
0.1
CPT0081880003
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0065810003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0065820001
Normal
0.1
CPT0063630003
Tumor
0.1
CPT0075570001
Normal
0.1
CPT0092310003
Normal
0.1
CPT0018250001
Normal
0.1
CPT0086820003
Tumor
0.1
CPT0014350001
Normal
0.1
CPT0026410003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0009020003
Normal
0.1
CPT0064370003
Tumor
0.1
CPT0017850003
Tumor
0.1
CPT0075170001
Normal
0.1
CPT0079180003
Tumor
0.1
CPT0023710001
Normal
0.1
CPT0065690003
Tumor
0.1
CPT0078940001
Normal
0.1
CPT0001180009
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0025610001
Normal
0.1
CPT0084590001
Normal
0.1
CPT0014470001
Normal
0.1
CPT0064400001
Normal
0.1
CPT0065870003
Tumor
0.1
CPT0089480003
Normal
0.1
CPT0007870001
Normal
0.1
CPT0026420001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0014370004
Tumor
0.1
CPT0019160001
Normal
0.1
CPT0025920001
Normal
0.1
CPT0079430001
Normal
0.1
CPT0024680001
Normal
0.1
CPT0065450001
Normal
0.1
CPT0020120003
Tumor
0.0
CPT0014160003
Tumor
0.0
CPT0079300001
Normal
0.0
CPT0066430001
Normal
0.0
CPT0088920001
Normal
0.0
CPT0002370001
Normal
0.0
CPT0006630003
Tumor
0.0
CPT0000790001
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0086830003
Normal
0.0
CPT0092790003
Tumor
0.0
CPT0010170001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0006730001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0079380003
Tumor
0.0
CPT0092800003
Normal
0.0
CPT0013790003
Normal
0.0
CPT0081620001
Normal
0.0
CPT0065750003
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0077140001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0092730003
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0086890003
Normal
0.0
CPT0020020001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0012080003
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0089040001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0092290003
Tumor
0.0
CPT0001260009
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0007860003
Tumor
0.0
CPT0006900003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0077310003
Tumor
0.0
CPT0092740003
Normal
0.0
CPT0012670003
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0012550003
Tumor
0.0
CPT0075560003
Tumor
0.0
CPT0012770003
Normal
-0.1
CPT0078930003
Tumor
-0.1
CPT0001190001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0088480003
Tumor
-0.1
CPT0086360003
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0012570003
Normal
-0.1
CPT0015730003
Tumor
-0.1
CPT0078510003
Tumor
-0.1
CPT0087050003
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0002270011
Tumor
-0.1
CPT0088710001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0012180003
Tumor
-0.2
CPT0012920003
Normal
-0.2
CPT0019990003
Tumor
-0.2
CPT0066470004
Tumor
-0.2
CPT0086030003
Tumor
-0.2
CPT0088970003
Tumor
-0.2
CPT0088550004
Tumor
-0.2
CPT0025110003
Tumor
-0.4
CPT0069190001
Normal
-0.5
CPT0069160003
Tumor
-0.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
