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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
69.1
nTPM
GTEx:
69.1
nTPM
FANTOM5:
38.8
Scaled Tags Per Million
Pig:
113.9
nTPM
Mouse:
297.2
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
69.1
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 69.1
Samples: 105
Max nTPM: 135.8
Min nTPM: 15.7
Std nTPM: 27.8
Median nTPM:
218_1
71 years, female
135.8
356_1
87 years, female
132.8
319_1
81 years, male
126.0
353_1
82 years, female
122.1
163_1
78 years, male
120.6
321_1
62 years, female
118.4
350_1
84 years, female
113.5
320_1
89 years, female
112.3
293_1
68 years, female
111.1
351_1
91 years, male
108.0
352_1
62 years, male
106.2
354_1
81 years, female
105.3
377_1
82 years, female
104.0
406_1
79 years, male
103.2
243_1
75 years, male
102.1
172_1
72 years, female
100.4
355_1
70 years, female
99.8
177_1
74 years, male
99.7
292_1
71 years, male
97.6
349_1
83 years, male
97.3
376_1
75 years, female
96.9
452_1
88 years, female
94.9
335_1
73 years, female
93.5
503_1
68 years, male
93.3
318_1
68 years, male
93.0
386_1
76 years, male
90.1
425_1
59 years, female
89.5
506_1
65 years, male
88.8
394_1
75 years, female
88.7
295_1
61 years, female
86.5
189_1
76 years, male
82.8
251_1
78 years, male
82.8
322_1
76 years, male
82.2
389_1
86 years, female
80.0
6_1
73 years, female
79.6
286_1
68 years, female
78.7
517_1
88 years, male
78.3
237_1
82 years, male
77.5
2_1
77 years, female
76.5
316_1
62 years, male
76.4
447_1
81 years, male
76.4
246_1
77 years, male
75.9
405_1
91 years, male
75.4
291_1
76 years, male
75.0
317_1
60 years, male
72.8
480_1
63 years, male
72.7
384_1
83 years, male
72.6
526_1
61 years, male
71.5
404_1
82 years, female
70.8
229_1
69 years, female
69.2
145_1
84 years, male
69.0
115_1
83 years, male
67.5
137_1
83 years, male
67.5
379_1
60 years, male
66.8
347_1
72 years, male
65.8
264_1
73 years, female
65.6
348_1
84 years, male
64.3
375_1
74 years, female
64.2
173_1
67 years, male
62.9
35_1
74 years, female
61.9
18_1
88 years, male
61.4
265_1
87 years, male
60.7
99_1
64 years, male
59.4
311_1
78 years, male
59.3
4_1
88 years, female
58.9
518_1
75 years, female
58.8
266_1
85 years, male
58.2
254_1
77 years, female
57.9
217_1
76 years, male
55.6
41_1
94 years, female
54.7
9_1
66 years, female
54.2
468_1
89 years, male
53.8
499_1
55 years, female
53.6
17_1
71 years, male
51.1
109_1
81 years, female
50.8
153_1
70 years, female
50.3
117_1
61 years, male
50.2
396_1
62 years, male
48.8
126_1
63 years, male
47.9
307_1
66 years, female
47.7
314_1
67 years, male
47.2
495_1
57 years, female
45.7
324_1
76 years, male
44.5
315_1
62 years, female
42.4
288_1
66 years, female
41.0
313_1
79 years, female
40.8
139_1
64 years, female
40.7
120_1
70 years, female
39.6
414_1
84 years, female
38.4
42_1
85 years, male
37.8
415_1
77 years, female
37.1
81_1
67 years, male
35.6
142_1
61 years, female
34.1
162_1
79 years, female
32.9
466_1
57 years, female
30.0
501_1
88 years, male
28.8
32_1
67 years, male
28.7
308_1
70 years, female
28.4
119_1
70 years, female
27.8
149_1
88 years, male
27.3
43_1
64 years, female
27.2
413_1
59 years, female
25.1
89_1
63 years, male
24.5
490_1
67 years, female
22.7
491_1
89 years, female
15.7
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
