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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COX6B1 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
904.9
Number of samples
349
Samples
Sample
Description
TPM
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
3462.0
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
3062.0
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
3009.7
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
2838.3
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
2587.9
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
2587.6
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
2485.3
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
2135.8
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
2088.1
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
2060.5
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
1884.8
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
1791.2
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
1781.3
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
1730.5
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
1725.7
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
1672.1
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
1671.4
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
1648.3
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
1627.3
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
1627.2
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
1607.5
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
1583.6
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
1554.4
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
1549.2
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
1518.4
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
1515.0
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
1506.5
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
1478.2
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
1471.2
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
1460.4
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
1459.2
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
1457.3
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
1448.5
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
1446.9
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
1440.7
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
1435.2
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
1401.4
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
1389.5
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
1385.9
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
1372.7
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
1371.7
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
1365.1
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
1363.2
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
1359.4
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
1354.6
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
1340.5
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
1339.8
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
1329.1
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
1329.0
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
1328.9
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
1327.4
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
1318.7
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
1310.9
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
1310.3
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
1309.5
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
1293.9
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
1275.2
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
1268.5
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
1249.0
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
1248.5
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
1247.8
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
1236.7
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
1236.3
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
1233.8
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
1231.1
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
1227.2
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
1226.0
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
1220.5
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
1214.6
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
1209.4
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
1197.9
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
1196.9
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
1188.4
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
1183.4
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
1169.6
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
1165.0
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
1164.7
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
1163.8
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
1161.9
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
1154.4
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
1153.1
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
1152.7
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
1149.7
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
1141.4
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
1139.8
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
1139.2
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
1136.7
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
1136.1
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
1134.4
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
1127.8
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
1109.3
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
1105.6
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
1100.9
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
1083.3
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
1081.5
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
1070.6
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
1066.2
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
1065.5
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
1054.1
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
1045.4
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
1042.7
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
1037.8
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
1026.4
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
1023.8
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
1019.0
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
1013.9
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
1005.2
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
1003.7
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
999.7
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
997.6
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
997.1
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
995.3
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
994.5
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
992.2
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
989.1
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
981.6
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
980.8
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
980.1
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
977.2
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
974.5
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
973.2
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
968.6
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
959.4
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
955.7
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
955.5
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
943.6
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
941.8
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
932.8
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
932.5
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
929.5
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
929.0
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
923.4
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
921.5
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
921.2
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
919.8
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
918.9
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
916.1
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
913.9
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
911.7
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
905.9
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
905.9
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
902.5
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
900.3
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
899.8
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
899.6
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
894.7
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
893.7
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
884.4
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
878.7
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
874.8
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
871.6
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
869.7
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
869.4
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
869.1
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
862.9
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
862.2
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
861.3
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
860.1
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
859.0
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
858.8
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
857.9
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
841.9
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
836.0
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
833.7
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
832.9
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
825.5
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
822.4
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
821.0
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
820.6
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
818.6
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
818.1
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
809.4
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
809.3
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
806.7
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
803.1
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
800.8
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
800.8
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
797.0
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
796.3
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
795.9
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
793.4
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
792.5
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
791.3
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
788.0
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
788.0
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
787.6
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
787.6
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
786.7
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
786.5
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
782.3
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
776.4
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
775.5
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
774.7
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
774.0
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
773.9
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
772.2
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
769.1
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
767.4
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
765.7
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
760.8
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
759.6
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
749.0
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
747.9
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
747.2
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
746.7
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
738.7
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
736.9
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
730.7
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
727.2
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
725.4
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
725.4
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
725.1
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
724.2
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
723.4
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
715.7
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
712.9
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
708.7
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
702.5
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
698.1
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
696.4
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
692.6
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
692.3
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
692.1
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
689.3
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
689.3
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
686.8
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
684.1
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
683.0
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
681.4
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
681.2
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
672.4
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
667.6
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
666.7
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
666.1
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
665.2
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
660.9
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
658.1
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
645.6
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
644.9
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
642.6
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
642.3
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
641.6
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
638.2
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
637.1
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
636.1
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
631.1
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
629.1
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
625.5
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
623.8
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
619.8
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
618.8
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
618.3
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
613.0
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
608.9
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
608.3
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
607.4
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
605.5
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
603.5
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
601.6
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
601.4
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
600.9
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
597.7
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
593.0
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
592.7
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
592.4
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
592.1
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
591.6
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
590.1
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
586.0
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
585.0
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
584.6
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
582.4
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
574.8
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
569.5
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
562.1
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
558.6
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
556.0
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
554.3
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
553.7
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
551.0
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
549.2
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
546.3
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
543.4
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
536.0
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
534.8
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
534.1
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
531.7
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
529.8
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
526.1
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
524.3
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
517.0
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
516.5
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
515.2
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
514.2
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
513.9
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
513.6
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
512.5
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
510.7
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
505.1
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
503.9
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
498.2
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
493.7
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
491.9
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
486.1
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
480.5
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
480.2
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
477.0
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
475.5
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
472.0
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
469.8
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
467.1
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
465.7
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
464.5
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
463.3
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
457.7
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
441.4
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
441.2
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
441.1
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
435.6
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
432.3
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
431.5
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
427.9
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
427.4
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
423.0
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
419.7
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
416.7
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
415.4
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
408.6
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
403.4
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
401.9
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
390.0
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
381.6
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
380.2
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
377.8
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
368.5
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
357.6
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
356.9
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
352.6
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
349.5
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
343.2
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
339.9
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
320.7
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
301.5
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
300.5
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
255.1
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
246.5
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
242.4
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
218.8
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COX6B1 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
585.9
Number of samples
81
Samples
Sample
Description
TPM
DO46333
0 years, female, NA, stage:III, dead, 359 days
2334.2
DO46581
0 years, female, NA, stage:III, dead, 408 days
1613.5
DO46366
0 years, female, NA, stage:III, dead, 2054 days
1419.6
DO46356
0 years, female, NA, stage:III, dead, 911 days
1416.7
DO46350
0 years, female, NA, stage:III, dead, 886 days
1394.9
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
1323.3
DO46576
0 years, female, NA, stage:III, alive, 133 days
1308.5
DO46408
0 years, female, NA, stage:III, dead, 489 days
1276.0
DO46380
0 years, female, NA, stage:III, dead, 1423 days
1004.1
DO46453
0 years, female, NA, stage:III, dead, 3294 days
966.4
DO46591
0 years, female, NA, stage:III, dead, 195 days
928.9
DO46331
0 years, female, NA, stage:III, dead, 612 days
857.3
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
845.2
DO46611
0 years, female, NA, stage:III, dead, 734 days
838.6
DO46364
0 years, female, NA, stage:III, dead, 806 days
814.4
DO46370
0 years, female, NA, stage:III, dead, 1727 days
762.9
DO46390
0 years, female, NA, stage:III, dead, 374 days
744.6
DO46330
0 years, female, NA, stage:III, dead, 684 days
721.2
DO46560
0 years, female, NA, stage:IV, dead, 286 days
718.1
DO46436
0 years, female, NA, stage:III, alive, 3193 days
716.6
DO46376
0 years, female, NA, stage:III, dead, 1430 days
694.7
DO46400
0 years, female, NA, stage:III, dead, 719 days
656.2
DO46396
0 years, female, NA, stage:III, dead, 583 days
655.9
DO46348
0 years, female, NA, stage:IV, dead, 287 days
643.8
DO46538
0 years, female, NA, stage:III, dead, 1527 days
640.8
DO46586
0 years, female, NA, stage:III, dead, 1019 days
638.5
DO46493
0 years, female, NA, stage:IV, alive, 839 days
630.6
DO46342
0 years, female, NA, stage:III, dead, 1398 days
616.5
DO46468
0 years, female, NA, stage:III, alive, 2776 days
613.4
DO46352
0 years, female, NA, stage:III, dead, 677 days
605.9
DO46463
0 years, female, NA, stage:III, dead, 2451 days
587.2
DO46358
0 years, female, NA, stage:III, dead, 423 days
579.1
DO46338
0 years, female, NA, stage:III, dead, 596 days
563.0
DO46329
0 years, female, NA, stage:III, dead, 1699 days
557.5
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
548.4
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
546.5
DO46372
0 years, female, NA, stage:III, dead, 1326 days
540.7
DO46382
0 years, female, NA, stage:IV, dead, 311 days
540.1
DO46374
0 years, female, NA, stage:III, dead, 1409 days
533.4
DO46378
0 years, female, NA, stage:III, alive, 843 days
529.8
DO46368
0 years, female, NA, stage:III, dead, 2879 days
504.9
DO46388
0 years, female, NA, stage:III, dead, 413 days
503.2
DO46546
0 years, female, NA, stage:III, dead, 1889 days
501.1
DO46551
0 years, female, NA, stage:III, dead, 1055 days
488.1
DO46533
0 years, female, NA, stage:III, alive, 3667 days
479.3
DO46398
0 years, female, NA, stage:III, alive, 437 days
469.1
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
442.3
DO46448
0 years, female, NA, stage:III, dead, 654 days
416.8
DO46602
0 years, female, NA, stage:III, dead, 205 days
405.2
DO46606
0 years, female, NA, stage:III, alive, 804 days
398.9
DO46392
0 years, female, NA, stage:III, dead, 628 days
398.4
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
396.0
DO46346
0 years, female, NA, stage:III, dead, 1187 days
390.7
DO46568
0 years, female, NA, stage:III, dead, 320 days
383.1
DO46528
0 years, female, NA, stage:III, alive, 6139 days
379.2
DO46432
0 years, female, NA, stage:III, alive, 2218 days
366.7
DO46412
0 years, female, NA, stage:III, dead, 597 days
364.6
DO46566
0 years, female, NA, stage:III, dead, 673 days
358.2
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
349.7
DO46334
0 years, female, NA, stage:III, dead, 496 days
332.3
DO46384
0 years, female, NA, stage:III, dead, 614 days
323.9
DO46362
0 years, female, NA, stage:III, dead, 1639 days
323.9
DO46571
0 years, female, NA, stage:III, dead, 243 days
321.4
DO46386
0 years, female, NA, stage:III, dead, 1162 days
311.0
DO46325
0 years, female, NA, stage:III, dead, 477 days
309.3
DO46332
0 years, female, NA, stage:III, dead, 689 days
290.0
DO46508
0 years, female, NA, stage:III, dead, 2101 days
286.2
DO46561
0 years, female, NA, stage:III, dead, 195 days
281.1
DO46443
0 years, female, NA, stage:III, dead, 2464 days
277.0
DO46340
0 years, female, NA, stage:III, dead, 616 days
274.8
DO46354
0 years, female, NA, stage:III, dead, 843 days
264.3
DO46518
0 years, female, NA, stage:III, alive, 2960 days
237.5
DO46402
0 years, female, NA, stage:III, dead, 511 days
236.1
DO46326
0 years, female, NA, stage:III, dead, 701 days
208.4
DO46588
0 years, female, NA, stage:III, dead, 438 days
205.3
DO46597
0 years, female, NA, stage:III, dead, 393 days
197.9
DO46336
0 years, female, NA, stage:IV, dead, 664 days
190.7
DO46327
0 years, female, NA, stage:III, dead, 184 days
189.3
DO46328
0 years, female, NA, stage:III, dead, 972 days
183.2
DO46404
0 years, female, NA, stage:III, dead, 690 days
173.6
DO46344
0 years, female, NA, stage:III, dead, 642 days
124.6
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
1.7
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
1.4
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
1.3
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
1.2
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
1.2
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
1.1
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
1.0
161317f3-1a39-438e-af45-cd2502_D2
Tumor
1.0
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
1.0
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
0.9
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
0.9
285fed94-1495-448e-879b-b55de9_D2
Tumor
0.9
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
0.9
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
0.9
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
0.9
15524912-685a-47ce-a824-567848_D2
Tumor
0.9
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
0.9
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
0.8
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
0.8
1db5574d-aca7-403c-8100-6e705f_D2
Normal
0.8
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
0.8
1772e913-f62e-446a-8cf3-720348_D2
Tumor
0.8
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
0.8
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
0.8
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
0.8
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
0.8
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
0.8
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
0.8
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
0.7
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
0.7
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
0.7
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
0.7
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
0.7
1a10c200-3895-4648-b951-94f99f_D2
Tumor
0.7
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
0.7
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
0.7
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
0.7
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
0.6
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
0.6
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
0.6
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
0.6
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
0.6
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
0.6
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
0.6
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
0.6
340a3769-3031-41ae-bb08-a2f696_D2
Normal
0.6
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
0.5
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
0.5
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
0.5
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
0.5
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
0.5
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
0.5
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
0.5
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
0.5
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
0.5
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
0.5
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
0.5
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
0.4
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
0.4
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
0.4
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
0.4
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
0.4
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
0.4
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
0.4
a65d8e76-640f-4341-a561-afbb57_D2
Normal
0.4
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
0.4
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
0.4
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
0.4
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
0.3
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
0.3
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
0.3
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
0.3
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
0.3
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
0.3
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
0.3
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
0.3
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
0.2
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
0.2
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
0.2
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
0.2
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
0.2
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
0.2
10c2d629-0287-4511-ac25-f29031_D2
Tumor
0.2
2f901c90-617e-46da-9fac-d68369_D2
Tumor
0.2
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
0.1
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
0.1
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
0.0
e9d416e7-f661-400a-896e-388545_D2
Tumor
0.0
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
0.0
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
0.0
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
0.0
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
0.0
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
0.0
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
0.0
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
-0.1
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
-0.1
a3a26070-fb84-406a-8280-d555e6_D2
Normal
-0.1
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
-0.1
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
-0.1
21efd60f-6a31-4b98-9477-16a905_D2
Normal
-0.1
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
-0.2
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
-0.3
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
-0.3
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
-0.4
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
-0.4
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
-0.4
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
-0.4
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
-0.7
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
