HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:36.1 nTPM
HPA Brain:133.6 nTPM
GTEx:36.1 nTPM
FANTOM5:110.7 Scaled Tags Per Million
Pig:40.7 nTPM
Mouse:56.9 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 133.6
Sample id Sample description nTPM
Hippocampus
nTPM: 113.5
2529 Female, age 94, left hemisphere 145.9
2148 Female, age 91, left hemisphere 125.7
2621 Female, age 67, right hemisphere 114.0
1855 Male, age 76, left hemisphere 107.6
1911 Female, age 85, right hemisphere 96.1
1898 Male, age 80, left hemisphere 91.6
Dentate gyrus
nTPM: 126.7
2530 Female, age 94, left hemisphere 156.8
2531 Female, age 67, both hemispheres 150.3
2246 Female, age 85, both hemispheres 129.0
2528 Male, age 74, both hemispheres 112.1
2010 Male, age 76, both hemispheres 109.9
1927 Female, age 91, both hemispheres 102.1
Entorhinal gyrus
nTPM: 133.6
2613 Female, age 94, left hemisphere 165.3
2686 Male, age 75, right hemisphere 151.7
2764 Male, age 80, right hemisphere 136.1
1938 Female, age 85, left hemisphere 126.2
1787 Male, age 76, left hemisphere 117.0
2117 Female, age 91, right hemisphere 105.5
Hippocampus, CA1
nTPM: 113.1
2045 Male, age 76, both hemispheres 132.0
1873 Female, age 85, both hemispheres 113.7
2527 Male, age 74, both hemispheres 112.4
2082 Female, age 91, right hemisphere 111.0
2749 Male, age 80, left hemisphere 96.7
Hippocampus, CA2
nTPM: 123.6
2437 Female, age 94, left hemisphere 157.4
1940 Female, age 85, left hemisphere 130.0
1963 Male, age 80, left hemisphere 123.1
1892 Male, age 76, both hemispheres 121.0
2113 Female, age 91, right hemisphere 116.2
2249 Male, age 74, both hemispheres 93.8
Hippocampus, CA3
nTPM: 121.9
2620 Female, age 94, left hemisphere 168.4
2861 Female, age 67, both hemispheres 149.2
1867 Male, age 76, both hemispheres 121.3
2436 Male, age 74, both hemispheres 105.0
1891 Female, age 85, both hemispheres 101.2
2137 Male, age 80, left hemisphere 86.1
Parahippocampal cortex
nTPM: 130.5
2622 Female, age 67, right hemisphere 196.9
2018 Male, age 76, both hemispheres 139.9
2532 Female, age 72, left hemisphere 139.5
2692 Male, age 74, both hemispheres 128.2
2250 Female, age 67, right hemisphere 125.5
2693 Female, age 94, both hemispheres 125.1
1933 Female, age 85, both hemispheres 118.2
1990 Female, age 91, right hemisphere 118.2
2245 Female, age 91, both hemispheres 110.7
1850 Male, age 80, both hemispheres 103.2
Perirhinal gyrus
nTPM: 113.7
1841 Female, age 85, right hemisphere 132.1
2848 Male, age 76, right hemisphere 121.7
1847 Female, age 91, left hemisphere 108.1
2521 Female, age 94, right hemisphere 107.2
1794 Male, age 80, right hemisphere 99.5
Subiculum
nTPM: 127.9
2438 Female, age 94, left hemisphere 143.0
2729 Female, age 91, right hemisphere 134.4
2619 Male, age 74, both hemispheres 133.5
2042 Male, age 76, both hemispheres 123.7
1977 Female, age 85, both hemispheres 119.8
1901 Male, age 80, both hemispheres 113.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 36.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.1
Samples: 197

Max nTPM: 94.2
Min nTPM: 13.7
Std nTPM: 13.4
Median nTPM: 34.0
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 94.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 89.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 88.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 81.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 78.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 64.8
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 63.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 63.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 62.9
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 59.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 58.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 110.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 110.7
FF:10153-102I9 76 years, female 155.0
FF:10169-103B7 60 years, female 66.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 40.7
Pig sample Sample description nTPM
Subiculum
nTPM: 33.1
Samples: 4

Max nTPM: 40.9
Min nTPM: 27.1
Sample A Female 40.9
Sample B Female 30.7
Sample C Male 33.7
Sample D Male 27.1
Dorsal hippocampus
nTPM: 26.8
Samples: 4

Max nTPM: 31.9
Min nTPM: 22.6
Sample A Female 22.6
Sample B Female 29.3
Sample C Male 23.3
Sample D Male 31.9
Entorhinal cortex
nTPM: 40.8
Samples: 4

Max nTPM: 47.1
Min nTPM: 37.1
Sample A Female 38.7
Sample B Female 40.1
Sample C Male 37.1
Sample D Male 47.1
Ventral hippocampus
nTPM: 30.8
Samples: 4

Max nTPM: 35.5
Min nTPM: 23.9
Sample A Female 23.9
Sample B Female 30.8
Sample C Male 35.5
Sample D Male 32.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 56.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 57.0
Samples: 4

Max nTPM: 63.6
Min nTPM: 53.5
Sample A Male 53.5
Sample B Male 56.1
Sample C Female 63.6
Sample D Female 54.6
Hippocampal formation
nTPM: 50.9
Samples: 4

Max nTPM: 55.8
Min nTPM: 45.7
Sample A Male 54.3
Sample B Male 47.7
Sample C Female 45.7
Sample D Female 55.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
71789807 Antisense, RP_050921_03_F07, Mouse strain C57BL/6J (56 days, male) 2.0

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