HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:56.6 nTPM
HPA Brain:44.7 nTPM
GTEx:56.6 nTPM
FANTOM5:33.4 Scaled Tags Per Million
Pig:69.6 nTPM
Mouse:4.8 nTPM
Allen mouse:7.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045472
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 44.7
Sample id Sample description nTPM
Hippocampus
nTPM: 42.3
1898 Male, age 80, left hemisphere 47.3
2148 Female, age 91, left hemisphere 42.7
2529 Female, age 94, left hemisphere 42.3
2621 Female, age 67, right hemisphere 41.2
1911 Female, age 85, right hemisphere 40.2
1855 Male, age 76, left hemisphere 40.1
Dentate gyrus
nTPM: 43.2
2530 Female, age 94, left hemisphere 49.4
2531 Female, age 67, both hemispheres 45.6
1927 Female, age 91, both hemispheres 41.8
2528 Male, age 74, both hemispheres 41.8
2010 Male, age 76, both hemispheres 40.5
2246 Female, age 85, both hemispheres 40.2
Entorhinal gyrus
nTPM: 43.9
2764 Male, age 80, right hemisphere 48.0
1787 Male, age 76, left hemisphere 45.0
2117 Female, age 91, right hemisphere 44.5
1938 Female, age 85, left hemisphere 43.9
2613 Female, age 94, left hemisphere 41.7
2686 Male, age 75, right hemisphere 40.2
Hippocampus, CA1
nTPM: 41.8
2527 Male, age 74, both hemispheres 45.7
2749 Male, age 80, left hemisphere 43.3
1873 Female, age 85, both hemispheres 40.9
2045 Male, age 76, both hemispheres 39.8
2082 Female, age 91, right hemisphere 39.2
Hippocampus, CA2
nTPM: 41.7
2249 Male, age 74, both hemispheres 43.2
2437 Female, age 94, left hemisphere 42.4
2113 Female, age 91, right hemisphere 41.6
1892 Male, age 76, both hemispheres 41.3
1940 Female, age 85, left hemisphere 41.0
1963 Male, age 80, left hemisphere 40.7
Hippocampus, CA3
nTPM: 41.8
2620 Female, age 94, left hemisphere 49.6
2436 Male, age 74, both hemispheres 48.0
2861 Female, age 67, both hemispheres 39.8
1867 Male, age 76, both hemispheres 39.1
1891 Female, age 85, both hemispheres 37.6
2137 Male, age 80, left hemisphere 36.7
Parahippocampal cortex
nTPM: 42.9
1990 Female, age 91, right hemisphere 48.3
2532 Female, age 72, left hemisphere 46.9
2245 Female, age 91, both hemispheres 46.4
1850 Male, age 80, both hemispheres 44.3
2250 Female, age 67, right hemisphere 44.2
1933 Female, age 85, both hemispheres 42.9
2622 Female, age 67, right hemisphere 42.3
2693 Female, age 94, both hemispheres 40.1
2018 Male, age 76, both hemispheres 37.6
2692 Male, age 74, both hemispheres 36.2
Perirhinal gyrus
nTPM: 44.7
1794 Male, age 80, right hemisphere 52.0
1841 Female, age 85, right hemisphere 46.4
1847 Female, age 91, left hemisphere 45.6
2521 Female, age 94, right hemisphere 40.8
2848 Male, age 76, right hemisphere 38.6
Subiculum
nTPM: 40.5
1977 Female, age 85, both hemispheres 47.9
1901 Male, age 80, both hemispheres 43.2
2619 Male, age 74, both hemispheres 43.0
2729 Female, age 91, right hemisphere 38.3
2042 Male, age 76, both hemispheres 35.5
2438 Female, age 94, left hemisphere 35.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 56.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 56.6
Samples: 197

Max nTPM: 109.7
Min nTPM: 21.3
Std nTPM: 12.6
Median nTPM: 56.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 109.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 95.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 91.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 91.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 89.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 89.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 86.0
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 83.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 81.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 81.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 79.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 33.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.4
FF:10153-102I9 76 years, female 36.8
FF:10169-103B7 60 years, female 30.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 69.6
Pig sample Sample description nTPM
Subiculum
nTPM: 60.5
Samples: 4

Max nTPM: 82.7
Min nTPM: 48.3
Sample A Female 82.7
Sample B Female 56.9
Sample C Male 54.1
Sample D Male 48.3
Dorsal hippocampus
nTPM: 69.6
Samples: 4

Max nTPM: 86.0
Min nTPM: 50.8
Sample A Female 86.0
Sample B Female 66.9
Sample C Male 74.7
Sample D Male 50.8
Entorhinal cortex
nTPM: 62.7
Samples: 4

Max nTPM: 74.9
Min nTPM: 50.0
Sample A Female 57.0
Sample B Female 68.8
Sample C Male 74.9
Sample D Male 50.0
Ventral hippocampus
nTPM: 64.5
Samples: 4

Max nTPM: 77.1
Min nTPM: 55.3
Sample A Female 55.9
Sample B Female 55.3
Sample C Male 77.1
Sample D Male 69.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 4.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.7
Samples: 4

Max nTPM: 4.9
Min nTPM: 4.5
Sample A Male 4.7
Sample B Male 4.9
Sample C Female 4.6
Sample D Female 4.5
Hippocampal formation
nTPM: 4.8
Samples: 4

Max nTPM: 5.1
Min nTPM: 4.4
Sample A Male 5.1
Sample B Male 5.0
Sample C Female 4.4
Sample D Female 4.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.8
69113841 Antisense, RP_050316_02_H06, Mouse strain C57BL/6J (56 days, male) 7.8

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