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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ITPA is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
39.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
75.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
66.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
65.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
63.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
63.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
62.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
60.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
59.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
56.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
55.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
55.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
54.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
54.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
53.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
50.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
50.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
48.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
48.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
47.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
46.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
44.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
44.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
44.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
44.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
44.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
43.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
42.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
41.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
40.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
40.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
40.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
40.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
40.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
40.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
39.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
37.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
36.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
36.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
36.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
35.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
34.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
34.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
33.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
33.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
33.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
33.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
31.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
30.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
28.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
28.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
28.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
27.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
26.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
26.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
25.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
25.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
23.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
20.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
20.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
19.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
19.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
14.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ITPA is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
37.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
101.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
92.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
88.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
78.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
77.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
69.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
68.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
67.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
65.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
63.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
63.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
63.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
62.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
62.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
62.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
61.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
61.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
61.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
61.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
59.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
59.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
59.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
59.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
58.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
58.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
58.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
57.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
57.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
57.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
56.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
55.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
55.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
54.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
54.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
54.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
54.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
53.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
53.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
52.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
52.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
52.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
52.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
52.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
52.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
52.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
51.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
51.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
51.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
51.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
51.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
51.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
51.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
51.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
51.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
50.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
50.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
50.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
50.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
50.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
50.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
50.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
50.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
50.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
50.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
50.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
50.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
50.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
49.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
49.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
49.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
49.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
48.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
48.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
48.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
48.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
48.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
48.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
48.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
48.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
48.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
48.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
48.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
48.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
48.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
48.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
48.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
47.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
47.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
47.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
47.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
47.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
47.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
47.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
46.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
46.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
46.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
46.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
46.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
46.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
46.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
46.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
46.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
46.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
46.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
46.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
45.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
45.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
45.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
45.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
45.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
45.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
45.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
44.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
44.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
44.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
44.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
44.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
44.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
44.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
44.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
43.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
43.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
43.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
43.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
43.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
43.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
43.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
43.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
43.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
43.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
43.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
43.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
42.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
42.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
42.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
42.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
42.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
42.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
42.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
42.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
42.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
42.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
42.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
42.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
42.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
42.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
42.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
42.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
42.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
41.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
41.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
41.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
41.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
41.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
41.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
41.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
41.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
41.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
41.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
41.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
41.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
41.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
41.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
41.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
41.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
41.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
41.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
41.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
40.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
40.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
40.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
40.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
40.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
40.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
40.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
40.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
40.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
40.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
40.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
40.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
40.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
40.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
40.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
40.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
40.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
40.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
40.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
40.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
40.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
40.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
40.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
40.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
39.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
39.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
39.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
39.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
39.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
39.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
39.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
39.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
39.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
39.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
39.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
39.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
39.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
39.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
39.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
39.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
39.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
39.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
39.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
39.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
38.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
38.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
38.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
38.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
38.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
38.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
38.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
38.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
38.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
38.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
38.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
38.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
38.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
38.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
38.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
38.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
38.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
38.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
38.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
38.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
38.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
37.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
37.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
37.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
37.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
37.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
37.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
37.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
37.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
37.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
37.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
37.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
37.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
37.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
37.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
37.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
37.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
37.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
37.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
37.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
37.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
37.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
37.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
37.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
37.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
36.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
36.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
36.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
36.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
36.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
36.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
36.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
36.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
36.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
36.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
36.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
36.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
36.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
36.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
36.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
36.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
36.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
36.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
36.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
36.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
36.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
35.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
35.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
35.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
35.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
35.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
35.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
35.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
35.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
35.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
35.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
35.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
35.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
35.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
35.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
35.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
35.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
35.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
35.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
35.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
35.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
35.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
35.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
35.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
34.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
34.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
34.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
34.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
34.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
34.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
34.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
34.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
34.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
34.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
34.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
34.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
34.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
34.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
34.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
34.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
33.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
33.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
33.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
33.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
33.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
33.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
33.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
33.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
33.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
33.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
33.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
33.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
33.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
33.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
33.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
33.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
33.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
33.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
33.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
33.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
32.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
32.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
32.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
32.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
32.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
32.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
32.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
32.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
32.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
32.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
32.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
32.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
32.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
32.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
32.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
32.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
32.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
32.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
32.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
32.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
32.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
32.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
31.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
31.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
31.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
31.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
31.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
31.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
31.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
31.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
31.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
31.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
31.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
31.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
31.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
31.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
31.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
31.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
30.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
30.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
30.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
30.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
30.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
30.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
30.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
30.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
30.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
30.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
30.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
30.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
30.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
30.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
30.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
30.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
30.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
30.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
30.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
30.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
30.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
29.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
29.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
29.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
29.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
29.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
29.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
29.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
29.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
29.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
29.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
29.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
29.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
29.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
29.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
29.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
29.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
28.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
28.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
28.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
28.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
28.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
28.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
28.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
28.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
28.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
28.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
28.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
28.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
28.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
28.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
28.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
28.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
28.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
28.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
28.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
27.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
27.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
27.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
27.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
27.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
27.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
27.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
27.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
27.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
27.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
27.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
27.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
27.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
26.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
26.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
26.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
26.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
26.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
26.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
26.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
26.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
26.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
25.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
25.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
25.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
25.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
25.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
25.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
25.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
25.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
25.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
25.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
25.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
25.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
24.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
24.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
24.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
24.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
24.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
24.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
24.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
24.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
24.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
23.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
23.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
23.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
23.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
23.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
22.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
22.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
22.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
22.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
22.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
22.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
22.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
21.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
21.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
21.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
21.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
21.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
21.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
20.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
20.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
20.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
20.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
20.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
19.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
19.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
19.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
18.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
18.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
18.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
18.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
18.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
17.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
17.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
17.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
16.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
16.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
16.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
16.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
15.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
14.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
13.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
12.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
12.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
10.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
10.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
8.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ITPA is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
39.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
82.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
77.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
71.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
62.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
59.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
58.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
57.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
53.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
52.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
50.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
50.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
48.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
47.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
47.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
46.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
46.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
46.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
46.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
46.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
45.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
45.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
45.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
45.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
44.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
44.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
44.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
44.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
43.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
43.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
43.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
43.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
43.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
43.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
42.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
42.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
42.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
42.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
42.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
42.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
41.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
40.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
40.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
39.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
39.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
39.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
39.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
38.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
38.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
38.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
38.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
37.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
37.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
37.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
37.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
36.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
36.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
36.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
36.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
36.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
35.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
35.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
35.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
35.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
34.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
34.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
34.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
34.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
33.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
33.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
33.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
33.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
33.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
33.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
32.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
32.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
31.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
31.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
31.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
31.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
31.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
30.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
30.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
30.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
29.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
29.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
29.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
28.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
28.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
27.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
26.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
26.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
24.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
23.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
23.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
22.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
22.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
22.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
21.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
20.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ITPA is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
65.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
244.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
156.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
155.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
152.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
148.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
148.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
144.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
144.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
138.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
128.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
128.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
127.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
127.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
125.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
124.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
124.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
123.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
120.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
120.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
119.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
117.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
117.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
114.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
113.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
111.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
110.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
108.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
104.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
104.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
101.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
101.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
100.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
98.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
98.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
98.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
98.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
97.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
96.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
95.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
95.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
93.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
92.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
92.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
91.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
91.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
91.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
91.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
90.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
89.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
89.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
89.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
88.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
87.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
87.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
86.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
86.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
86.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
86.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
85.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
85.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
84.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
84.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
83.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
83.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
82.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
82.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
82.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
81.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
81.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
79.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
79.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
79.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
78.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
78.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
77.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
77.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
76.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
76.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
76.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
75.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
75.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
74.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
74.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
73.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
73.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
73.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
73.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
73.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
72.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
72.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
72.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
71.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
71.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
70.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
70.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
70.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
70.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
69.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
69.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
69.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
69.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
69.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
69.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
69.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
68.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
68.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
68.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
68.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
67.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
67.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
67.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
67.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
67.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
67.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
66.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
66.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
66.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
66.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
65.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
65.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
65.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
65.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
65.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
64.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
64.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
64.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
64.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
63.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
63.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
63.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
62.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
62.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
62.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
62.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
62.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
61.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
61.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
61.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
61.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
61.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
61.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
61.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
61.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
60.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
60.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
60.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
60.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
60.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
60.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
59.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
59.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
59.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
59.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
59.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
59.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
59.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
58.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
58.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
58.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
58.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
57.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
57.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
57.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
57.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
57.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
57.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
57.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
57.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
56.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
56.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
56.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
56.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
56.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
56.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
56.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
55.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
55.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
55.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
55.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
55.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
54.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
54.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
54.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
54.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
53.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
53.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
53.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
53.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
52.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
52.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
52.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
52.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
52.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
52.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
52.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
51.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
51.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
51.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
51.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
50.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
50.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
50.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
49.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
49.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
49.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
49.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
49.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
49.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
49.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
48.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
48.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
48.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
48.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
48.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
48.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
47.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
47.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
47.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
47.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
47.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
47.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
46.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
46.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
46.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
46.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
45.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
45.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
44.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
44.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
44.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
44.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
43.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
43.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
43.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
42.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
42.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
41.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
40.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
40.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
40.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
40.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
39.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
38.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
38.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
37.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
37.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
37.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
37.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
37.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
36.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
36.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
36.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
35.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
34.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
34.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
33.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
31.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
31.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
30.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
29.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
29.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
28.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
28.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
26.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
25.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
22.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
22.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
22.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
19.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
19.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
17.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
15.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
8.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
8.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
7.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
3.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0025050003
Tumor
1.3
CPT0012670003
Tumor
1.1
CPT0084560003
Tumor
1.0
CPT0079180003
Tumor
1.0
CPT0021240003
Tumor
1.0
CPT0000640003
Tumor
0.8
CPT0025880003
Tumor
0.8
CPT0024670003
Tumor
0.8
CPT0065430003
Tumor
0.7
CPT0010110003
Tumor
0.7
CPT0009060003
Tumor
0.6
CPT0000780007
Tumor
0.6
CPT0026410003
Tumor
0.5
CPT0014450004
Tumor
0.5
CPT0012280003
Tumor
0.5
CPT0006440003
Tumor
0.5
CPT0001500009
Tumor
0.5
CPT0078660003
Tumor
0.5
CPT0092790003
Tumor
0.5
CPT0077110003
Tumor
0.5
CPT0001220008
Tumor
0.5
CPT0088480003
Tumor
0.5
CPT0065930003
Tumor
0.5
CPT0012370003
Tumor
0.5
CPT0017410003
Tumor
0.4
CPT0025110003
Tumor
0.4
CPT0019130003
Tumor
0.4
CPT0007320003
Tumor
0.4
CPT0085670003
Tumor
0.4
CPT0079410003
Tumor
0.4
CPT0086820003
Tumor
0.4
CPT0066480003
Tumor
0.4
CPT0081990003
Tumor
0.4
CPT0011240003
Tumor
0.3
CPT0001260009
Tumor
0.3
CPT0088760003
Tumor
0.3
CPT0089460004
Tumor
0.3
CPT0081600003
Tumor
0.3
CPT0023350003
Tumor
0.3
CPT0063630003
Tumor
0.3
CPT0077490003
Tumor
0.3
CPT0078830003
Tumor
0.3
CPT0006630003
Tumor
0.3
CPT0086360003
Tumor
0.3
CPT0015810003
Tumor
0.3
CPT0001230001
Normal
0.3
CPT0010120001
Normal
0.3
CPT0071150004
Tumor
0.3
CPT0001540009
Tumor
0.3
CPT0092160003
Tumor
0.2
CPT0007860003
Tumor
0.2
CPT0014370004
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0069000003
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0075570001
Normal
0.2
CPT0088630003
Tumor
0.2
CPT0082010001
Normal
0.2
CPT0066520001
Normal
0.2
CPT0012640003
Normal
0.2
CPT0012770003
Normal
0.2
CPT0088550004
Tumor
0.2
CPT0000790001
Normal
0.2
CPT0023690003
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0001270001
Normal
0.2
CPT0006530001
Normal
0.2
CPT0009080003
Normal
0.1
CPT0020120003
Tumor
0.1
CPT0015910003
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0075560003
Tumor
0.1
CPT0078990003
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0076330003
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0086870003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0065810003
Tumor
0.1
CPT0081880003
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0024680001
Normal
0.1
CPT0017850003
Tumor
0.1
CPT0001510001
Normal
0.1
CPT0002270011
Tumor
0.1
CPT0092800003
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0009000003
Tumor
0.0
CPT0088970003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0025290003
Tumor
0.0
CPT0012080003
Tumor
0.0
CPT0078800003
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0077310003
Tumor
0.0
CPT0065450001
Normal
0.0
CPT0092290003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0086030003
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0019160001
Normal
0.0
CPT0001340003
Tumor
0.0
CPT0092310003
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0079230003
Tumor
-0.1
CPT0079300001
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0018250001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0065690003
Tumor
-0.1
CPT0001180009
Tumor
-0.1
CPT0013790003
Normal
-0.1
CPT0010160003
Tumor
-0.1
CPT0001350001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0065750003
Tumor
-0.1
CPT0088780001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0000660001
Normal
-0.2
CPT0006900003
Tumor
-0.2
CPT0000870016
Tumor
-0.2
CPT0063640001
Normal
-0.2
CPT0025920001
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0075170001
Normal
-0.2
CPT0076350001
Normal
-0.2
CPT0079430001
Normal
-0.2
CPT0025170003
Tumor
-0.2
CPT0086830003
Normal
-0.2
CPT0065820001
Normal
-0.2
CPT0007870001
Normal
-0.2
CPT0014160003
Tumor
-0.2
CPT0006950001
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0088690003
Tumor
-0.2
CPT0063320003
Tumor
-0.2
CPT0086970003
Normal
-0.3
CPT0025350003
Tumor
-0.3
CPT0012550003
Tumor
-0.3
CPT0086950003
Tumor
-0.3
CPT0086890003
Normal
-0.3
CPT0001190001
Normal
-0.3
CPT0065870003
Tumor
-0.3
CPT0012180003
Tumor
-0.3
CPT0079380003
Tumor
-0.3
CPT0011410003
Tumor
-0.3
CPT0006730001
Normal
-0.3
CPT0087050003
Normal
-0.3
CPT0023360001
Normal
-0.3
CPT0092740003
Normal
-0.4
CPT0025580004
Tumor
-0.4
CPT0002370001
Normal
-0.4
CPT0078510003
Tumor
-0.4
CPT0088900003
Tumor
-0.4
CPT0079000001
Normal
-0.5
CPT0088710001
Normal
-0.5
CPT0066470004
Tumor
-0.5
CPT0063330001
Normal
-0.5
CPT0012090003
Normal
-0.5
CPT0000890001
Normal
-0.6
CPT0012570003
Normal
-0.6
CPT0025060001
Normal
-0.6
CPT0064370003
Tumor
-0.6
CPT0009020003
Normal
-0.6
CPT0010170001
Normal
-0.6
CPT0089020003
Tumor
-0.6
CPT0066430001
Normal
-0.6
CPT0019990003
Tumor
-0.7
CPT0088920001
Normal
-0.7
CPT0014130001
Normal
-0.7
CPT0015730003
Tumor
-0.7
CPT0089040001
Normal
-0.8
CPT0001550001
Normal
-0.8
CPT0079480003
Tumor
-0.8
CPT0020020001
Normal
-0.9
CPT0012900004
Tumor
-1.0
CPT0064400001
Normal
-1.0
CPT0075720003
Tumor
-1.1
CPT0069160003
Tumor
-1.1
CPT0025610001
Normal
-1.1
CPT0012920003
Normal
-1.3
CPT0079510001
Normal
-1.6
CPT0069190001
Normal
-1.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
