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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
11.3
nTPM
HPA Brain:
9.6
nTPM
GTEx:
11.3
nTPM
FANTOM5:
12.5
Scaled Tags Per Million
Pig:
4.6
nTPM
SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
9.6
Sample id
Sample description
nTPM
Cervical spinal cord, central gray nTPM: 9.6
2194
Female, age 79, both hemispheres
10.4
2816
Male, age 47, midline
9.8
2048
Male, age 55, midline
9.6
1981
Female, age 72, midline
9.3
2565
Male, age 75, midline
9.0
Cervical spinal cord, dorsal horn nTPM: 9.6
2296
Male, age 66, both hemispheres
10.8
2173
Female, age 72, unknown
9.7
2297
Male, age 75, both hemispheres
9.7
1877
Male, age 55, unknown
9.4
2069
Male, age 47, both hemispheres
9.3
2721
Male, age 90, both hemispheres
8.9
Cervical spinal cord, ventral horn nTPM: 8.6
2820
Female, age 79, both hemispheres
10.3
2068
Male, age 55, unknown
9.1
2098
Female, age 72, unknown
8.8
2809
Male, age 90, both hemispheres
8.7
2480
Male, age 75, both hemispheres
7.8
2295
Male, age 66, both hemispheres
6.8
SPINAL CORD - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
11.3
GTEx sample id
Sample description
nTPM
Brain - Spinal cord (cervical c-1) Average nTPM: 11.3
Samples: 159
Max nTPM: 18.3
Min nTPM: 6.3
Std nTPM: 2.2
Median nTPM: 11.2
GTEX-1LB8K-0011-R9a-SM-EZ6MP
50-59 years, male
18.3
GTEX-148VJ-0011-R9b-SM-5SI77
70-79 years, male
17.2
GTEX-1HBPH-0011-R9a-SM-CMKH3
40-49 years, female
16.9
GTEX-1CAV2-0011-R9b-SM-9WG5M
40-49 years, female
16.5
GTEX-1H1DF-0011-R9b-SM-CM2RN
40-49 years, female
16.1
GTEX-1I1CD-0011-R9a-SM-CMKHB
60-69 years, female
15.9
GTEX-1LVAO-0011-R9a-SM-EZ6MY
60-69 years, male
15.9
GTEX-13PLJ-0011-R9b-SM-5O9DV
60-69 years, female
15.3
GTEX-1GTWX-0011-R9a-SM-ADEH4
60-69 years, male
15.3
GTEX-1IDJH-0011-R9a-SM-ADEIN
70-79 years, male
15.1
GTEX-1KANB-0011-R9b-SM-EZ6MO
50-59 years, male
15.1
GTEX-18464-0011-R9a-SM-731BK
50-59 years, male
15.0
GTEX-YJ89-0011-R9a-SM-4SOK7
60-69 years, male
15.0
GTEX-11ONC-0011-R9b-SM-5NQ8J
60-69 years, male
14.8
GTEX-13FLV-0011-R9b-SM-5L3DA
50-59 years, male
14.6
GTEX-1HSMO-0011-R9b-SM-CM2T2
60-69 years, male
14.6
GTEX-13OVL-0011-R9a-SM-5P9GX
50-59 years, male
13.9
GTEX-14E6C-0011-R9a-SM-6EU33
40-49 years, male
13.7
GTEX-1J8JJ-0011-R9a-SM-ACKVF
60-69 years, female
13.7
GTEX-1I1GV-0011-R9b-SM-ARZLE
60-69 years, male
13.6
GTEX-1I1HK-0011-R9a-SM-CMKHK
60-69 years, male
13.6
GTEX-1GZ4I-0011-R9b-SM-B2LY8
50-59 years, male
13.5
GTEX-1J8EW-0011-R9b-SM-D4P2F
60-69 years, female
13.5
GTEX-147GR-0011-R9a-SM-5S2UY
60-69 years, male
13.4
GTEX-11ZTS-0011-R9b-SM-DO93Q
60-69 years, female
13.3
GTEX-1H3NZ-0011-R9a-SM-ADEH7
60-69 years, male
13.3
GTEX-1JMLX-0011-R9a-SM-EYYXM
50-59 years, male
13.3
GTEX-1JN1M-0011-R9a-SM-EZ6MR
60-69 years, female
13.3
GTEX-1LSNL-0011-R9b-SM-EYYWK
50-59 years, male
13.3
GTEX-1ICLZ-0011-R9a-SM-ARL7E
60-69 years, male
13.2
GTEX-13S7M-0011-R9a-SM-5O9DW
60-69 years, female
13.1
GTEX-RU72-0011-R9A-SM-2TF67
50-59 years, female
13.1
GTEX-1GN1U-0011-R9b-SM-CMKFW
50-59 years, female
13.0
GTEX-1HBPM-0011-R9b-SM-ARL7C
60-69 years, female
13.0
GTEX-1I1GS-0011-R9b-SM-CMKHF
60-69 years, male
13.0
GTEX-13OVJ-0011-R9b-SM-5L3GD
50-59 years, female
12.9
GTEX-12WSD-0011-R9a-SM-5GU6W
60-69 years, female
12.8
GTEX-13N2G-0011-R9b-SM-5MR4E
60-69 years, male
12.8
GTEX-1H1DG-0011-R9b-SM-ACKVB
70-79 years, male
12.8
GTEX-11GSP-0011-R9b-SM-5NQ77
60-69 years, female
12.6
GTEX-13SLW-0011-R9a-SM-5O9BT
70-79 years, male
12.6
GTEX-1F6I4-0011-R9a-SM-CMKFU
60-69 years, male
12.5
GTEX-1IGQW-0011-R9b-SM-D4P25
60-69 years, male
12.4
GTEX-1RQEC-0011-R9a-SM-EZ6N3
60-69 years, male
12.4
GTEX-13X6I-0011-R9b-SM-5PNZJ
60-69 years, male
12.3
GTEX-11ZVC-0011-R9a-SM-57WC5
50-59 years, female
12.2
GTEX-12WSH-0011-R9b-SM-5LZUG
50-59 years, male
12.2
GTEX-1EWIQ-0011-R9a-SM-ARL8L
70-79 years, female
12.2
GTEX-1GN2E-0011-R9b-SM-9WG7F
60-69 years, male
12.2
GTEX-1GZHY-0011-R9a-SM-9WG5R
50-59 years, female
12.2
GTEX-11ZUS-0011-R9b-SM-5BC76
30-39 years, male
12.1
GTEX-1C6VS-0011-R9b-SM-9WG5W
60-69 years, male
12.1
GTEX-1F88F-0011-R9b-SM-9WG7L
60-69 years, female
12.1
GTEX-13JUV-0011-R9a-SM-5LZX3
40-49 years, female
12.0
GTEX-13N1W-0011-R9b-SM-5MR4R
70-79 years, male
12.0
GTEX-16Z82-0011-R9a-SM-7DUFA
60-69 years, male
12.0
GTEX-T6MN-0011-R9A-SM-32QOZ
50-59 years, male
12.0
GTEX-11EMC-0011-R9b-SM-DO921
60-69 years, female
12.0
GTEX-1192X-0011-R9b-SM-DO934
50-59 years, male
11.9
GTEX-12WSC-0011-R9a-SM-5GU4U
50-59 years, male
11.8
GTEX-16NPV-0011-R9b-SM-79ONF
50-59 years, female
11.8
GTEX-PWO3-0011-R9A-SM-EVR2V
60-69 years, female
11.8
GTEX-131XW-0011-R9a-SM-5N9EO
50-59 years, female
11.7
GTEX-14ABY-0011-R9a-SM-5PNZK
50-59 years, male
11.7
GTEX-NL4W-0011-R9a-SM-2I3G1
50-59 years, male
11.7
GTEX-1A32A-0011-R9b-SM-7MGXD
50-59 years, female
11.7
GTEX-1IY9M-0011-R9b-SM-D3L8J
60-69 years, male
11.6
GTEX-13RTJ-0011-R9a-SM-5Q5AY
60-69 years, male
11.5
GTEX-OXRO-0011-R9A-SM-3NB1X
60-69 years, female
11.5
GTEX-1I19N-0011-R9a-SM-CMKHN
70-79 years, male
11.5
GTEX-13PVQ-0011-R9b-SM-5LU3B
50-59 years, male
11.4
GTEX-14PJM-0011-R9b-SM-6EU35
50-59 years, female
11.4
GTEX-14PJO-0011-R9b-SM-62LE9
60-69 years, male
11.4
GTEX-15DYW-0011-R9b-SM-6PALB
60-69 years, female
11.4
GTEX-QVUS-0011-R9A-SM-3GIJA
60-69 years, female
11.4
GTEX-QDT8-0011-R9A-SM-CYPRD
30-39 years, female
11.4
GTEX-139UW-0011-R9b-SM-5LZYT
60-69 years, male
11.3
GTEX-13PL6-0011-R9b-SM-5O9CH
40-49 years, female
11.3
GTEX-TSE9-0011-R9A-SM-3DB7Q
60-69 years, female
11.3
GTEX-YFC4-0011-R9a-SM-4SOK4
40-49 years, female
11.2
GTEX-13NYB-0011-R9b-SM-5MR5P
40-49 years, male
11.1
GTEX-14BIM-0011-R9a-SM-6LLJL
60-69 years, female
11.1
GTEX-14BIN-0011-R9a-SM-5SI76
50-59 years, female
11.1
GTEX-14BMV-0011-R9b-SM-5ZZUA
50-59 years, male
11.1
GTEX-ZE9C-0011-R9a-SM-4WWCY
60-69 years, male
11.1
GTEX-1H23P-0011-R9a-SM-CM2T1
60-69 years, male
11.1
GTEX-145LU-0011-R9b-SM-5SI66
50-59 years, male
11.0
GTEX-RNOR-0011-R9A-SM-2TF52
50-59 years, female
10.9
GTEX-1H3O1-0011-R9b-SM-CM2SQ
60-69 years, male
10.9
GTEX-1HR98-0011-R9b-SM-ARL79
60-69 years, male
10.9
GTEX-1R46S-0011-R9a-SM-EZ6N7
60-69 years, female
10.9
GTEX-15DCD-0011-R9b-SM-7KUED
70-79 years, female
10.8
GTEX-1GZ2Q-0011-R9a-SM-9WG7A
40-49 years, male
10.7
GTEX-1HBPI-0011-R9b-SM-ARL76
50-59 years, male
10.7
GTEX-13CZV-0011-R9a-SM-5LZXT
60-69 years, male
10.6
GTEX-14JIY-0011-R9a-SM-6EU34
60-69 years, male
10.6
GTEX-13NZA-0011-R9b-SM-5MR5I
60-69 years, male
10.5
GTEX-11UD2-0011-R9b-SM-DO926
50-59 years, male
10.5
GTEX-13FTY-0011-R9b-SM-5KM2U
40-49 years, female
10.4
GTEX-13NYS-0011-R9b-SM-5MR44
60-69 years, male
10.4
GTEX-WL46-0011-R9A-SM-3MJFP
50-59 years, male
10.3
GTEX-1F52S-0011-R9a-SM-9WG62
60-69 years, female
10.3
GTEX-1GF9V-0011-R9a-SM-CL53K
60-69 years, male
10.3
GTEX-OHPN-0011-R9A-SM-5TDEJ
60-69 years, female
10.2
GTEX-Q2AG-0011-R9A-SM-2HMJ6
40-49 years, female
10.2
GTEX-1HGF4-0011-R9a-SM-ADEH9
60-69 years, male
10.2
GTEX-1OJC4-0011-R9a-SM-EZ6N1
50-59 years, female
10.2
GTEX-13O1R-0011-R9b-SM-5KM33
60-69 years, male
10.1
GTEX-13QJC-0011-R9b-SM-5PNX3
60-69 years, female
10.1
GTEX-15CHQ-0011-R9a-SM-6LLHX
60-69 years, male
10.1
GTEX-15G19-0011-R9b-SM-7KUEE
60-69 years, male
10.1
GTEX-17EVQ-0011-R9b-SM-79OJY
70-79 years, male
10.1
GTEX-1GN73-0011-R9a-SM-CKZO5
60-69 years, male
10.1
GTEX-15DDE-0011-R9b-SM-6M46U
50-59 years, female
10.0
GTEX-1MJK2-0011-R9b-SM-EZ6MZ
50-59 years, male
10.0
GTEX-13VXU-0011-R9b-SM-5SI73
50-59 years, male
9.9
GTEX-NPJ8-0011-R9a-SM-2YUN5
40-49 years, male
9.9
GTEX-QVJO-0011-R9A-SM-2S1QH
60-69 years, female
9.8
GTEX-R55E-0011-R9A-SM-2TC6C
20-29 years, male
9.8
GTEX-11DZ1-0011-R9a-SM-DO933
50-59 years, male
9.8
GTEX-14PN4-0011-R9a-SM-6LLH9
50-59 years, male
9.7
GTEX-1H2FU-0011-R9b-SM-CE6S4
60-69 years, female
9.7
GTEX-1BAJH-0011-R9b-SM-7EPIQ
70-79 years, male
9.6
GTEX-1JJ6O-0011-R9a-SM-EYYXP
60-69 years, male
9.6
GTEX-13FXS-0011-R9a-SM-5K7UI
50-59 years, male
9.4
GTEX-ZF28-0011-R9a-SM-4WWDY
60-69 years, male
9.4
GTEX-XMD1-0011-R9A-SM-4AT49
60-69 years, male
9.3
GTEX-1J1OQ-0011-R9b-SM-ARZMK
40-49 years, female
9.2
GTEX-13SLX-0011-R9b-SM-5SI6X
50-59 years, female
9.1
GTEX-15ER7-0011-R9b-SM-6PALF
20-29 years, female
9.1
GTEX-1B8L1-0011-R9b-SM-9WG5U
60-69 years, male
9.1
GTEX-XLM4-0011-R9A-SM-4AT45
60-69 years, male
9.0
GTEX-ZVZQ-0011-R9a-SM-51MRH
60-69 years, female
9.0
GTEX-11WQK-0011-R9b-SM-5BC6N
50-59 years, male
8.9
GTEX-15EO6-0011-R9a-SM-6PALG
50-59 years, male
8.9
GTEX-1B933-0011-R9a-SM-79OOR
50-59 years, female
8.8
GTEX-NPJ7-0011-R9a-SM-2TC5R
60-69 years, female
8.8
GTEX-1LVA9-0011-R9a-SM-EYYWF
50-59 years, male
8.7
GTEX-1CAMQ-0011-R9a-SM-9WG5Z
40-49 years, male
8.4
GTEX-1CB4H-0011-R9a-SM-CKZNL
60-69 years, female
8.4
GTEX-1GF9W-0011-R9b-SM-9WG7J
60-69 years, male
8.4
GTEX-14BIL-0011-R9a-SM-5SI7A
50-59 years, male
8.3
GTEX-ZAB4-0011-R9a-SM-4SOKG
40-49 years, male
8.3
GTEX-1EH9U-0011-R9b-SM-9WG5T
60-69 years, male
8.3
GTEX-1HFI6-0011-R9b-SM-CMKH4
40-49 years, male
8.3
GTEX-13CIG-0011-R9a-SM-5K7VU
50-59 years, male
8.2
GTEX-139T4-0011-R9b-SM-5HL6S
50-59 years, female
8.1
GTEX-T5JC-0011-R9A-SM-32PLV
20-29 years, male
8.1
GTEX-13OW5-0011-R9b-SM-5O9CL
60-69 years, male
8.0
GTEX-16XZZ-0011-R9b-SM-7DHKX
60-69 years, male
7.9
GTEX-1EU9M-0011-R9a-SM-9WG61
60-69 years, male
7.8
GTEX-14E7W-0011-R9a-SM-62LE6
70-79 years, male
7.7
GTEX-1IKJJ-0011-R9a-SM-ARZLI
60-69 years, male
7.7
GTEX-12126-0011-R9b-SM-5BC6P
20-29 years, male
7.6
GTEX-1A8G7-0011-R9b-SM-7IGQH
60-69 years, male
7.2
GTEX-1EKGG-0011-R9a-SM-CMKFV
60-69 years, male
7.2
GTEX-131YS-0011-R9b-SM-5EQLY
60-69 years, female
7.0
GTEX-1C6VQ-0011-R9a-SM-7SB85
50-59 years, male
7.0
GTEX-1H1ZS-0011-R9a-SM-CM2SO
70-79 years, male
6.3
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SPINAL CORD - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
