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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PSMF1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
60.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
182.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
165.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
162.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
158.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
121.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
107.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
106.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
103.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
101.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
93.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
88.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
87.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
87.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
86.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
85.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
84.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
72.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
72.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
71.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
66.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
65.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
64.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
60.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
59.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
59.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
58.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
53.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
51.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
50.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
50.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
49.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
45.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
45.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
44.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
44.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
44.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
44.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
43.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
41.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
41.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
40.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
40.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
39.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
38.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
38.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
38.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
37.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
36.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
35.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
35.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
34.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
34.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
33.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
32.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
31.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
31.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
30.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
29.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
29.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
27.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
25.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
21.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
20.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PSMF1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
55.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
119.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
105.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
103.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
99.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
99.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
95.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
95.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
94.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
92.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
90.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
90.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
88.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
87.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
87.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
86.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
85.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
85.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
84.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
84.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
84.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
84.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
83.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
82.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
82.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
82.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
81.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
81.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
81.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
81.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
80.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
79.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
79.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
79.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
78.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
78.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
77.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
76.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
76.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
76.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
76.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
75.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
75.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
75.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
74.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
74.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
74.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
74.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
74.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
73.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
73.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
73.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
73.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
73.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
73.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
72.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
72.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
72.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
72.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
72.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
72.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
72.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
72.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
72.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
72.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
72.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
72.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
71.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
71.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
71.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
71.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
71.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
71.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
71.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
71.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
71.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
71.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
71.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
71.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
70.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
70.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
70.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
70.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
70.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
70.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
69.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
69.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
69.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
69.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
69.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
69.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
69.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
69.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
69.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
68.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
68.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
68.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
68.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
68.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
68.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
68.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
68.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
68.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
68.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
68.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
67.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
67.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
67.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
67.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
67.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
67.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
67.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
66.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
66.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
66.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
66.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
66.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
66.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
66.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
66.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
66.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
66.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
66.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
66.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
65.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
65.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
65.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
65.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
65.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
65.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
65.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
65.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
65.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
64.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
64.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
64.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
64.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
64.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
64.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
64.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
64.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
64.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
64.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
64.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
64.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
63.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
63.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
63.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
63.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
63.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
63.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
63.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
63.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
63.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
63.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
63.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
63.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
63.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
63.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
62.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
62.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
62.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
62.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
62.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
62.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
62.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
62.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
62.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
62.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
62.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
62.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
62.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
61.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
61.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
61.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
61.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
61.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
61.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
61.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
61.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
61.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
61.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
61.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
61.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
61.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
60.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
60.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
60.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
60.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
60.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
60.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
60.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
60.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
60.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
60.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
60.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
60.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
60.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
60.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
59.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
59.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
59.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
59.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
59.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
59.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
59.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
59.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
59.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
59.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
59.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
59.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
58.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
58.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
58.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
58.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
58.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
58.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
58.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
58.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
58.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
57.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
57.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
57.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
57.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
57.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
57.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
57.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
57.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
57.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
57.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
57.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
57.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
57.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
57.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
57.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
57.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
57.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
57.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
56.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
56.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
56.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
56.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
56.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
56.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
56.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
56.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
56.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
56.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
56.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
56.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
56.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
56.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
56.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
56.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
56.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
56.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
56.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
56.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
56.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
55.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
55.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
55.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
55.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
55.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
55.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
55.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
55.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
55.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
55.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
55.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
54.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
54.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
54.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
54.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
54.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
54.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
54.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
54.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
54.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
54.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
54.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
54.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
54.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
54.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
54.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
54.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
54.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
54.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
53.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
53.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
53.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
53.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
53.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
53.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
53.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
53.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
53.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
53.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
53.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
53.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
53.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
53.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
53.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
53.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
53.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
52.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
52.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
52.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
52.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
52.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
52.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
52.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
52.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
52.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
52.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
52.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
52.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
52.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
52.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
52.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
51.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
51.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
51.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
51.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
51.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
51.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
51.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
51.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
51.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
51.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
51.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
50.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
50.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
50.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
50.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
50.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
50.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
50.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
50.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
50.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
50.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
50.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
50.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
50.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
50.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
49.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
49.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
49.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
49.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
49.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
49.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
49.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
49.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
49.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
49.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
49.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
49.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
49.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
48.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
48.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
48.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
48.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
48.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
48.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
48.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
48.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
48.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
48.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
48.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
47.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
47.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
47.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
47.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
47.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
47.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
47.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
47.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
47.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
47.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
47.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
47.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
47.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
46.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
46.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
46.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
46.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
46.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
45.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
45.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
45.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
45.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
45.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
45.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
45.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
45.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
45.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
44.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
44.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
44.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
44.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
44.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
44.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
43.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
43.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
43.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
43.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
43.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
43.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
43.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
43.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
43.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
42.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
42.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
42.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
42.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
42.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
42.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
42.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
42.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
42.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
42.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
41.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
41.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
41.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
41.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
41.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
41.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
40.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
40.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
40.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
40.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
40.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
40.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
40.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
40.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
40.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
39.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
39.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
39.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
39.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
39.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
38.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
38.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
38.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
38.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
37.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
37.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
37.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
37.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
37.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
37.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
36.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
36.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
36.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
36.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
36.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
35.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
35.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
35.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
35.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
35.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
35.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
34.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
34.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
34.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
34.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
34.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
34.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
34.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
34.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
34.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
33.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
33.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
33.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
33.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
33.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
33.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
32.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
32.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
32.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
32.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
32.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
32.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
32.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
31.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
31.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
31.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
31.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
31.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
31.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
30.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
30.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
30.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
30.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
30.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
29.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
29.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
29.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
28.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
28.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
28.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
28.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
28.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
28.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
28.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
28.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
27.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
26.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
26.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
26.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
25.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
24.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
23.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
23.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
20.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
19.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
18.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
16.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
16.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
15.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
15.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PSMF1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
56.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
114.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
91.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
90.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
90.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
87.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
79.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
78.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
75.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
74.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
74.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
73.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
72.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
71.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
70.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
70.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
70.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
69.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
69.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
69.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
69.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
69.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
67.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
67.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
66.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
66.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
64.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
64.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
63.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
62.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
62.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
62.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
62.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
61.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
61.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
61.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
61.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
61.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
61.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
61.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
60.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
59.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
59.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
58.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
58.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
58.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
58.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
58.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
57.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
57.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
57.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
56.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
56.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
56.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
56.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
55.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
55.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
54.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
54.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
53.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
53.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
53.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
53.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
53.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
53.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
52.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
52.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
51.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
50.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
50.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
50.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
50.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
49.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
48.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
47.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
46.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
45.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
45.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
44.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
44.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
44.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
42.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
42.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
41.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
41.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
41.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
41.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
40.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
40.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
39.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
38.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
38.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
37.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
37.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
37.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
36.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
31.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
31.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
29.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
24.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PSMF1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
71.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
357.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
271.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
245.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
228.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
224.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
201.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
198.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
197.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
191.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
188.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
184.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
179.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
172.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
171.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
171.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
161.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
149.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
148.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
145.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
144.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
140.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
140.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
139.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
136.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
136.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
136.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
135.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
134.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
134.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
128.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
128.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
124.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
122.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
121.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
120.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
116.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
111.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
107.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
107.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
106.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
106.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
104.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
103.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
102.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
101.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
101.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
100.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
99.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
99.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
98.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
96.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
96.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
95.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
91.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
91.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
89.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
89.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
88.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
87.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
87.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
87.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
86.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
86.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
86.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
86.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
85.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
84.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
84.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
83.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
83.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
83.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
82.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
82.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
81.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
80.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
80.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
80.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
80.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
80.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
79.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
78.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
77.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
76.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
76.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
75.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
74.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
74.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
74.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
74.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
73.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
72.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
72.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
72.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
71.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
71.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
71.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
71.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
70.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
69.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
69.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
69.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
68.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
67.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
67.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
66.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
66.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
65.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
65.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
65.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
64.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
64.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
63.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
63.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
63.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
62.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
62.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
61.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
61.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
61.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
61.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
61.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
61.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
61.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
61.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
61.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
60.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
60.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
60.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
60.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
60.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
60.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
59.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
59.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
59.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
59.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
59.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
59.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
59.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
58.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
58.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
58.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
58.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
58.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
58.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
58.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
57.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
57.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
57.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
57.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
56.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
56.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
56.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
56.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
55.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
55.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
55.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
55.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
54.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
54.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
54.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
54.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
54.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
54.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
53.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
53.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
53.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
53.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
53.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
53.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
52.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
52.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
52.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
52.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
52.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
52.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
52.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
51.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
51.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
51.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
51.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
51.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
50.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
50.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
50.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
49.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
49.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
49.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
49.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
49.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
49.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
49.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
48.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
48.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
48.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
48.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
48.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
48.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
47.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
47.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
46.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
46.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
46.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
46.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
46.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
45.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
45.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
45.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
44.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
44.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
44.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
44.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
44.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
44.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
44.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
43.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
43.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
43.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
43.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
43.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
43.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
43.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
42.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
42.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
42.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
42.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
42.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
41.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
41.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
41.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
41.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
41.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
41.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
40.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
40.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
40.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
40.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
39.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
38.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
38.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
38.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
38.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
38.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
37.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
37.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
37.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
36.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
36.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
35.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
35.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
34.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
34.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
34.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
34.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
34.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
34.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
33.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
33.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
32.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
32.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
32.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
31.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
31.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
31.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
30.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
29.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
29.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
28.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
28.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
28.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
28.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
27.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
27.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
27.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
26.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
26.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
25.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
25.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
25.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
23.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
22.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
16.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
15.5
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078510003
Tumor
0.9
CPT0092290003
Tumor
0.8
CPT0077310003
Tumor
0.6
CPT0025290003
Tumor
0.6
CPT0007860003
Tumor
0.6
CPT0064370003
Tumor
0.6
CPT0089460004
Tumor
0.6
CPT0066470004
Tumor
0.6
CPT0065930003
Tumor
0.6
CPT0020120003
Tumor
0.6
CPT0012550003
Tumor
0.6
CPT0092790003
Tumor
0.5
CPT0019990003
Tumor
0.5
CPT0023690003
Tumor
0.5
CPT0014160003
Tumor
0.5
CPT0078930003
Tumor
0.5
CPT0069160003
Tumor
0.5
CPT0025050003
Tumor
0.5
CPT0006630003
Tumor
0.5
CPT0015730003
Tumor
0.5
CPT0081880003
Tumor
0.4
CPT0066480003
Tumor
0.4
CPT0065690003
Tumor
0.4
CPT0021240003
Tumor
0.4
CPT0015910003
Tumor
0.4
CPT0086030003
Tumor
0.4
CPT0017410003
Tumor
0.4
CPT0063320003
Tumor
0.4
CPT0001500009
Tumor
0.4
CPT0025580004
Tumor
0.4
CPT0025170003
Tumor
0.4
CPT0065750003
Tumor
0.4
CPT0089020003
Tumor
0.4
CPT0012900004
Tumor
0.4
CPT0088760003
Tumor
0.4
CPT0000780007
Tumor
0.3
CPT0077490003
Tumor
0.3
CPT0006900003
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0079180003
Tumor
0.3
CPT0014370004
Tumor
0.3
CPT0086360003
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0001260009
Tumor
0.3
CPT0075560003
Tumor
0.3
CPT0010160003
Tumor
0.3
CPT0009000003
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0012670003
Tumor
0.3
CPT0079480003
Tumor
0.3
CPT0011240003
Tumor
0.3
CPT0012080003
Tumor
0.3
CPT0014450004
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0011410003
Tumor
0.2
CPT0000640003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0078990003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0012180003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0078660003
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0081990003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0076330003
Tumor
0.2
CPT0001540009
Tumor
0.2
CPT0092730003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0001220008
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0088970003
Tumor
0.1
CPT0063630003
Tumor
0.1
CPT0077110003
Tumor
0.1
CPT0001180009
Tumor
0.1
CPT0078830003
Tumor
0.1
CPT0025880003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0084560003
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0086950003
Tumor
0.1
CPT0086870003
Tumor
0.0
CPT0077500001
Normal
0.0
CPT0079510001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0088480003
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0065430003
Tumor
0.0
CPT0000790001
Normal
0.0
CPT0076350001
Normal
0.0
CPT0075720003
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0065450001
Normal
0.0
CPT0081600003
Tumor
0.0
CPT0066430001
Normal
0.0
CPT0010120001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0002370001
Normal
0.0
CPT0085670003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0012770003
Normal
0.0
CPT0078670001
Normal
0.0
CPT0001230001
Normal
0.0
CPT0017850003
Tumor
0.0
CPT0012920003
Normal
-0.1
CPT0088550004
Tumor
-0.1
CPT0009060003
Tumor
-0.1
CPT0081620001
Normal
-0.1
CPT0088630003
Tumor
-0.1
CPT0025920001
Normal
-0.1
CPT0078800003
Tumor
-0.1
CPT0078940001
Normal
-0.1
CPT0065870003
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0064400001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0001270001
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0069000003
Tumor
-0.1
CPT0001350001
Normal
-0.1
CPT0086820003
Tumor
-0.1
CPT0026420001
Normal
-0.1
CPT0009020003
Normal
-0.1
CPT0009080003
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0079270003
Tumor
-0.1
CPT0018250001
Normal
-0.1
CPT0001340003
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0026410003
Tumor
-0.1
CPT0063330001
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0025110003
Tumor
-0.1
CPT0063640001
Normal
-0.1
CPT0079300001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0079410003
Tumor
-0.1
CPT0086830003
Normal
-0.2
CPT0007870001
Normal
-0.2
CPT0082010001
Normal
-0.2
CPT0002270011
Tumor
-0.2
CPT0092190003
Normal
-0.2
CPT0084590001
Normal
-0.2
CPT0023350003
Tumor
-0.2
CPT0000660001
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0012570003
Normal
-0.2
CPT0010170001
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0075130003
Tumor
-0.2
CPT0014350001
Normal
-0.2
CPT0017450001
Normal
-0.2
CPT0088780001
Normal
-0.2
CPT0075170001
Normal
-0.2
CPT0001190001
Normal
-0.2
CPT0079000001
Normal
-0.2
CPT0069010001
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0077320001
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0075570001
Normal
-0.2
CPT0065820001
Normal
-0.2
CPT0012640003
Normal
-0.2
CPT0079430001
Normal
-0.2
CPT0069190001
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0006730001
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0012090003
Normal
-0.2
CPT0000890001
Normal
-0.2
CPT0006530001
Normal
-0.2
CPT0088500001
Normal
-0.3
CPT0013790003
Normal
-0.3
CPT0014130001
Normal
-0.3
CPT0092740003
Normal
-0.3
CPT0012290003
Normal
-0.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.