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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GPR108 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
41.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
238.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
150.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
90.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
80.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
67.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
64.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
63.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
57.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
55.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
53.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
52.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
51.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
50.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
50.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
46.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
45.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
45.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
44.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
44.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
44.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
43.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
43.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
42.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
41.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
40.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
39.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
38.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
38.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
35.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
35.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
34.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
34.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
33.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
33.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
33.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
32.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
32.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
31.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
30.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
30.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
30.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
30.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
29.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
29.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
29.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
29.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
29.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
27.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
27.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
27.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
26.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
24.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
24.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
23.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
23.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
22.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
21.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
19.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
17.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
9.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
5.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
1.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GPR108 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
42.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
97.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
97.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
92.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
87.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
86.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
85.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
85.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
82.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
81.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
80.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
78.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
75.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
74.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
71.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
71.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
71.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
71.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
70.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
70.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
70.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
70.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
69.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
69.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
69.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
68.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
68.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
67.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
67.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
67.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
66.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
66.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
66.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
65.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
65.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
65.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
65.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
65.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
64.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
63.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
63.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
63.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
63.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
62.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
62.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
62.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
61.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
61.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
61.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
61.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
61.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
61.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
61.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
60.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
60.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
60.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
60.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
60.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
60.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
60.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
59.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
59.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
59.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
59.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
59.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
59.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
59.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
58.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
58.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
58.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
58.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
58.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
58.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
58.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
57.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
57.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
57.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
57.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
57.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
57.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
56.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
56.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
56.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
56.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
56.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
56.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
56.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
56.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
56.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
56.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
56.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
55.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
55.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
55.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
55.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
55.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
55.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
55.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
55.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
55.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
55.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
55.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
55.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
54.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
54.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
54.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
54.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
54.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
54.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
54.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
54.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
54.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
54.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
54.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
54.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
54.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
53.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
53.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
53.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
53.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
53.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
53.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
53.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
53.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
53.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
53.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
53.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
53.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
53.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
52.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
52.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
52.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
52.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
52.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
52.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
52.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
52.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
52.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
52.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
52.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
52.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
52.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
52.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
52.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
51.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
51.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
51.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
51.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
51.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
51.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
51.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
51.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
51.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
51.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
51.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
51.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
51.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
51.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
51.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
50.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
50.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
50.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
50.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
50.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
50.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
50.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
50.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
50.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
50.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
49.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
49.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
49.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
49.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
49.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
49.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
49.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
49.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
49.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
49.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
48.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
48.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
48.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
48.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
48.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
48.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
48.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
48.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
48.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
48.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
48.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
48.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
48.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
47.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
47.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
47.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
47.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
47.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
47.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
47.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
47.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
47.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
47.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
47.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
46.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
46.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
46.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
46.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
46.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
46.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
46.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
46.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
46.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
46.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
46.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
45.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
45.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
45.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
45.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
45.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
45.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
45.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
45.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
45.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
44.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
44.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
44.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
44.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
44.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
44.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
44.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
44.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
44.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
44.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
44.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
44.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
44.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
44.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
44.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
44.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
44.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
44.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
44.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
43.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
43.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
43.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
43.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
43.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
43.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
43.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
43.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
43.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
43.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
43.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
43.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
42.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
42.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
42.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
42.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
42.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
42.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
42.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
42.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
42.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
42.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
42.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
41.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
41.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
41.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
41.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
41.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
41.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
41.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
41.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
41.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
41.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
41.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
40.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
40.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
40.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
40.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
40.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
40.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
40.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
40.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
40.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
40.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
40.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
40.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
39.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
39.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
39.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
39.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
39.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
39.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
39.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
39.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
39.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
39.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
39.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
39.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
38.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
38.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
38.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
38.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
38.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
38.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
38.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
38.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
38.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
37.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
37.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
37.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
37.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
37.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
37.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
37.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
37.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
37.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
37.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
36.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
36.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
36.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
36.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
36.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
36.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
36.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
36.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
36.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
35.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
35.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
35.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
35.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
35.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
35.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
35.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
35.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
35.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
35.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
35.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
35.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
35.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
35.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
35.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
35.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
35.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
35.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
34.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
34.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
34.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
34.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
34.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
34.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
34.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
34.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
34.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
34.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
34.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
34.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
34.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
34.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
34.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
34.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
33.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
33.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
33.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
33.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
33.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
33.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
33.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
33.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
32.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
32.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
32.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
32.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
32.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
32.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
31.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
31.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
31.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
31.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
31.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
31.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
31.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
31.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
31.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
30.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
30.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
30.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
30.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
30.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
30.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
30.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
30.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
30.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
30.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
30.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
30.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
30.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
30.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
30.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
30.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
29.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
29.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
29.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
29.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
29.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
29.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
29.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
29.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
29.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
29.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
29.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
29.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
29.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
28.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
28.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
28.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
28.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
28.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
28.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
28.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
28.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
27.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
27.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
27.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
27.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
27.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
27.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
27.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
27.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
27.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
27.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
27.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
27.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
27.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
27.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
26.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
26.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
26.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
26.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
26.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
26.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
26.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
26.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
26.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
25.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
25.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
25.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
25.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
25.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
24.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
24.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
24.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
24.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
24.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
24.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
23.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
23.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
23.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
23.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
23.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
23.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
23.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
22.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
22.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
22.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
22.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
22.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
22.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
21.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
21.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
21.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
21.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
21.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
21.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
21.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
21.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
21.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
21.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
20.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
20.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
20.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
20.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
20.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
20.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
20.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
19.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
19.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
19.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
19.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
19.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
19.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
19.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
19.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
18.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
18.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
18.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
18.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
18.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
18.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
18.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
18.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
18.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
17.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
17.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
17.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
17.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
17.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
17.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
17.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
17.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
16.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
15.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
15.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
13.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
13.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
13.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
11.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
11.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
10.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
4.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GPR108 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
44.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
80.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
79.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
77.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
74.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
73.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
71.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
71.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
64.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
63.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
62.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
61.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
61.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
61.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
58.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
58.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
56.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
56.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
56.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
54.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
54.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
53.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
53.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
53.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
53.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
52.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
52.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
52.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
51.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
51.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
50.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
50.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
50.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
50.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
49.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
49.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
47.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
47.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
47.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
46.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
46.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
46.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
46.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
45.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
45.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
44.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
44.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
44.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
44.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
43.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
43.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
43.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
43.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
43.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
42.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
42.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
41.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
40.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
39.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
39.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
39.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
39.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
38.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
38.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
38.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
38.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
38.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
37.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
37.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
37.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
36.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
36.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
36.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
36.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
36.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
35.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
35.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
35.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
34.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
34.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
34.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
34.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
33.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
33.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
33.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
32.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
31.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
31.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
29.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
28.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
28.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
28.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
27.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
26.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
26.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
26.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
25.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
25.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
23.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GPR108 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
41.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
150.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
144.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
137.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
134.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
94.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
92.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
89.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
87.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
85.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
83.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
83.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
83.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
82.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
82.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
81.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
78.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
78.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
77.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
77.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
73.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
73.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
72.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
72.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
71.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
71.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
71.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
66.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
66.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
66.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
66.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
66.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
65.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
64.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
64.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
63.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
63.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
62.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
61.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
61.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
60.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
58.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
58.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
57.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
57.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
56.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
56.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
56.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
56.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
56.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
56.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
56.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
55.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
55.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
54.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
54.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
54.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
54.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
54.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
54.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
54.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
54.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
54.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
53.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
53.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
53.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
53.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
52.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
51.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
51.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
51.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
51.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
51.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
51.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
50.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
50.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
50.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
50.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
50.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
50.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
49.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
49.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
49.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
49.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
48.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
47.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
47.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
47.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
47.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
47.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
47.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
46.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
46.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
46.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
46.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
46.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
46.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
46.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
45.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
45.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
45.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
45.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
45.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
45.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
45.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
44.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
44.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
44.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
44.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
44.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
44.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
44.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
43.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
43.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
43.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
43.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
43.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
43.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
43.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
42.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
42.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
42.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
41.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
41.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
41.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
41.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
41.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
40.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
40.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
40.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
40.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
40.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
39.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
39.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
39.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
39.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
39.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
39.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
39.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
39.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
39.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
38.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
38.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
38.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
38.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
38.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
38.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
38.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
37.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
37.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
37.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
37.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
37.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
37.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
36.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
36.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
35.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
35.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
35.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
35.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
34.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
34.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
34.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
34.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
34.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
33.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
33.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
33.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
33.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
33.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
32.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
32.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
32.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
32.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
31.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
31.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
31.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
31.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
31.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
31.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
31.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
31.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
31.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
31.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
31.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
31.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
31.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
30.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
30.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
30.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
30.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
30.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
30.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
30.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
30.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
30.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
30.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
30.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
29.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
29.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
29.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
29.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
29.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
29.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
29.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
29.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
29.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
29.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
29.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
28.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
28.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
28.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
28.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
28.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
28.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
28.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
27.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
27.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
27.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
27.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
27.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
27.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
27.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
27.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
26.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
26.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
26.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
26.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
26.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
26.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
25.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
25.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
24.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
24.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
24.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
24.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
24.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
23.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
23.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
23.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
23.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
23.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
23.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
23.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
23.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
23.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
22.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
22.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
22.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
22.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
21.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
20.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
20.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
20.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
20.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
20.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
19.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
19.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
19.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
19.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
18.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
17.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
17.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
16.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
16.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
16.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
15.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
15.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
13.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
13.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
13.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
12.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
12.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
10.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
8.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
7.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
7.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
5.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0081880003
Tumor
1.4
CPT0015730003
Tumor
1.1
CPT0002350011
Tumor
1.0
CPT0086360003
Tumor
0.7
CPT0065430003
Tumor
0.7
CPT0007320003
Tumor
0.7
CPT0065750003
Tumor
0.6
CPT0064370003
Tumor
0.6
CPT0006440003
Tumor
0.6
CPT0001180009
Tumor
0.6
CPT0025050003
Tumor
0.6
CPT0000890001
Normal
0.5
CPT0001540009
Tumor
0.5
CPT0078990003
Tumor
0.5
CPT0024680001
Normal
0.4
CPT0092790003
Tumor
0.4
CPT0079000001
Normal
0.4
CPT0078660003
Tumor
0.4
CPT0065930003
Tumor
0.4
CPT0000870016
Tumor
0.4
CPT0071150004
Tumor
0.4
CPT0065870003
Tumor
0.4
CPT0001500009
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0001340003
Tumor
0.3
CPT0079480003
Tumor
0.3
CPT0087040003
Tumor
0.3
CPT0086870003
Tumor
0.3
CPT0020120003
Tumor
0.3
CPT0001220008
Tumor
0.3
CPT0026420001
Normal
0.3
CPT0012900004
Tumor
0.3
CPT0086820003
Tumor
0.3
CPT0079230003
Tumor
0.3
CPT0014160003
Tumor
0.2
CPT0023350003
Tumor
0.2
CPT0002270011
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0007860003
Tumor
0.2
CPT0063320003
Tumor
0.2
CPT0009060003
Tumor
0.2
CPT0066430001
Normal
0.2
CPT0092290003
Tumor
0.2
CPT0092730003
Tumor
0.2
CPT0000640003
Tumor
0.2
CPT0012180003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0025110003
Tumor
0.1
CPT0087050003
Normal
0.1
CPT0075130003
Tumor
0.1
CPT0023710001
Normal
0.1
CPT0085670003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0006630003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0088900003
Tumor
0.1
CPT0075170001
Normal
0.1
CPT0076330003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0077310003
Tumor
0.1
CPT0092800003
Normal
0.1
CPT0023360001
Normal
0.1
CPT0089460004
Tumor
0.1
CPT0088920001
Normal
0.0
CPT0077110003
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0006730001
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0019990003
Tumor
0.0
CPT0066480003
Tumor
0.0
CPT0012090003
Normal
0.0
CPT0025880003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0092740003
Normal
0.0
CPT0089480003
Normal
0.0
CPT0001350001
Normal
0.0
CPT0079180003
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0000780007
Tumor
0.0
CPT0075560003
Tumor
0.0
CPT0006950001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0079380003
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0006900003
Tumor
0.0
CPT0081990003
Tumor
0.0
CPT0009000003
Tumor
0.0
CPT0001260009
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0026410003
Tumor
0.0
CPT0078930003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0025060001
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0079410003
Tumor
-0.1
CPT0077140001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0075570001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0088480003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0069000003
Tumor
-0.1
CPT0065450001
Normal
-0.1
CPT0025580004
Tumor
-0.1
CPT0078830003
Tumor
-0.1
CPT0077500001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0088690003
Tumor
-0.1
CPT0012280003
Tumor
-0.2
CPT0001270001
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0014450004
Tumor
-0.2
CPT0078840001
Normal
-0.2
CPT0088550004
Tumor
-0.2
CPT0021240003
Tumor
-0.2
CPT0069160003
Tumor
-0.2
CPT0092310003
Normal
-0.2
CPT0023690003
Tumor
-0.2
CPT0025350003
Tumor
-0.2
CPT0010160003
Tumor
-0.2
CPT0025290003
Tumor
-0.2
CPT0077490003
Tumor
-0.2
CPT0066520001
Normal
-0.2
CPT0078670001
Normal
-0.2
CPT0009080003
Normal
-0.2
CPT0079510001
Normal
-0.2
CPT0014370004
Tumor
-0.2
CPT0086950003
Tumor
-0.2
CPT0088970003
Tumor
-0.2
CPT0078530001
Normal
-0.2
CPT0063630003
Tumor
-0.2
CPT0084590001
Normal
-0.2
CPT0066470004
Tumor
-0.2
CPT0065820001
Normal
-0.2
CPT0012670003
Tumor
-0.2
CPT0007870001
Normal
-0.2
CPT0001550001
Normal
-0.2
CPT0010170001
Normal
-0.2
CPT0018250001
Normal
-0.2
CPT0086370003
Normal
-0.3
CPT0001510001
Normal
-0.3
CPT0001190001
Normal
-0.3
CPT0088760003
Tumor
-0.3
CPT0088630003
Tumor
-0.3
CPT0082010001
Normal
-0.3
CPT0025170003
Tumor
-0.3
CPT0014470001
Normal
-0.3
CPT0086970003
Normal
-0.3
CPT0086830003
Normal
-0.3
CPT0000790001
Normal
-0.3
CPT0086890003
Normal
-0.3
CPT0020130001
Normal
-0.3
CPT0009020003
Normal
-0.3
CPT0019160001
Normal
-0.4
CPT0077320001
Normal
-0.4
CPT0079300001
Normal
-0.4
CPT0084560003
Tumor
-0.4
CPT0010120001
Normal
-0.4
CPT0002370001
Normal
-0.4
CPT0069010001
Normal
-0.4
CPT0012920003
Normal
-0.4
CPT0012640003
Normal
-0.4
CPT0063330001
Normal
-0.4
CPT0012550003
Tumor
-0.4
CPT0088500001
Normal
-0.4
CPT0069190001
Normal
-0.4
CPT0011410003
Tumor
-0.4
CPT0012370003
Tumor
-0.5
CPT0012570003
Normal
-0.5
CPT0017850003
Tumor
-0.5
CPT0092190003
Normal
-0.5
CPT0078510003
Tumor
-0.5
CPT0064400001
Normal
-0.5
CPT0012080003
Tumor
-0.6
CPT0011240003
Tumor
-0.6
CPT0013790003
Normal
-0.7
CPT0078800003
Tumor
-0.7
CPT0017410003
Tumor
-0.8
CPT0012770003
Normal
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
