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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
C3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
152.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
85.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
68.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
64.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
57.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
50.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
46.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
44.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
42.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
40.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
37.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
37.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
30.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
30.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
29.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
24.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
23.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
22.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
22.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
22.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
21.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
20.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
20.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
20.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
15.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
15.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
14.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
13.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
12.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
10.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
9.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
9.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
9.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
8.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
8.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
8.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
7.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
6.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
6.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
6.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
4.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
4.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
4.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
4.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
3.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
3.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
2.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
2.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
1.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
1.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
1.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
1.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
1.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
1.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
1.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
1.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
1.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
C3 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
501.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
3497.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
3191.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
2861.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
2592.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
2500.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
2448.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
2446.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
2240.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
2158.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
2147.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
1996.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
1962.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
1915.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
1890.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
1887.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
1884.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
1845.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
1823.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
1742.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
1725.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
1713.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
1667.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
1639.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
1541.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
1514.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
1498.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
1482.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
1458.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
1452.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
1439.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
1428.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
1409.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
1381.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
1366.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
1358.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
1347.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
1344.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
1326.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
1319.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
1284.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
1281.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
1279.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
1278.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
1265.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
1248.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
1241.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
1232.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
1230.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
1207.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
1197.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
1193.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
1186.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
1162.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
1159.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
1154.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
1152.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
1149.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
1095.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
1083.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
1072.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
1054.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
1048.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
1041.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
1030.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
1024.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
1020.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
1009.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
998.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
982.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
969.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
955.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
949.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
932.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
930.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
923.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
916.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
909.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
905.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
904.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
885.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
882.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
876.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
866.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
859.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
856.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
853.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
848.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
845.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
820.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
806.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
802.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
800.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
795.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
790.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
789.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
784.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
780.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
779.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
777.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
776.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
776.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
769.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
768.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
763.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
762.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
762.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
758.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
755.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
744.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
741.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
741.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
741.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
736.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
729.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
727.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
727.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
726.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
720.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
713.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
710.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
706.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
704.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
700.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
698.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
697.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
697.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
696.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
693.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
692.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
690.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
688.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
656.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
655.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
654.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
649.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
642.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
641.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
639.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
625.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
623.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
622.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
621.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
620.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
620.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
616.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
615.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
613.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
609.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
602.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
596.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
595.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
594.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
593.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
590.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
589.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
588.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
586.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
577.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
575.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
575.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
572.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
570.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
560.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
559.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
554.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
552.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
548.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
547.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
544.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
543.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
542.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
538.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
534.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
534.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
532.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
531.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
527.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
521.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
519.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
518.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
516.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
515.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
513.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
511.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
508.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
502.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
501.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
500.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
500.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
496.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
494.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
493.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
490.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
486.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
482.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
482.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
476.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
474.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
473.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
471.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
469.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
468.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
462.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
457.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
454.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
452.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
442.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
440.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
435.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
434.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
434.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
433.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
432.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
431.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
429.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
428.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
426.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
425.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
424.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
422.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
420.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
420.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
420.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
417.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
416.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
416.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
409.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
405.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
403.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
402.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
400.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
400.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
400.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
399.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
393.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
393.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
392.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
391.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
390.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
387.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
386.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
384.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
383.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
381.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
381.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
380.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
380.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
378.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
377.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
373.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
370.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
370.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
366.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
361.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
357.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
355.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
355.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
348.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
348.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
347.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
342.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
339.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
338.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
336.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
334.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
333.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
331.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
329.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
328.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
327.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
324.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
323.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
320.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
320.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
316.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
316.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
312.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
311.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
308.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
308.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
307.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
306.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
305.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
304.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
304.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
304.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
302.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
298.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
297.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
297.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
294.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
292.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
291.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
290.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
287.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
277.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
277.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
276.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
271.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
269.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
267.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
262.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
261.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
260.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
260.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
257.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
256.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
256.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
254.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
254.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
253.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
251.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
249.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
248.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
248.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
244.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
242.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
242.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
237.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
237.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
236.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
233.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
233.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
233.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
232.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
231.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
231.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
230.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
230.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
230.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
229.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
228.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
226.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
226.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
223.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
223.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
221.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
221.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
220.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
219.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
219.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
218.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
217.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
215.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
214.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
213.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
213.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
212.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
212.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
210.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
208.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
206.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
205.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
202.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
201.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
201.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
201.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
201.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
201.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
199.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
199.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
199.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
196.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
195.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
194.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
190.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
189.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
187.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
185.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
183.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
181.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
178.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
177.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
176.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
175.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
175.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
172.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
172.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
171.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
171.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
170.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
166.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
163.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
162.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
162.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
161.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
161.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
161.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
160.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
160.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
159.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
158.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
158.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
157.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
157.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
157.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
157.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
155.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
152.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
152.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
152.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
148.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
147.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
147.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
146.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
146.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
141.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
141.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
140.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
139.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
138.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
137.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
137.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
136.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
136.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
135.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
134.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
134.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
132.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
131.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
130.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
129.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
128.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
128.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
126.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
125.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
122.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
122.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
121.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
117.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
116.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
115.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
114.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
111.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
110.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
108.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
106.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
104.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
104.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
102.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
102.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
101.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
101.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
100.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
98.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
97.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
96.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
93.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
93.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
92.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
88.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
85.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
85.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
85.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
83.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
82.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
82.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
82.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
81.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
81.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
80.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
79.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
79.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
79.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
77.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
76.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
70.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
70.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
69.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
68.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
68.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
67.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
65.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
65.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
65.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
65.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
62.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
62.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
61.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
60.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
57.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
57.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
55.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
54.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
54.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
54.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
52.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
50.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
47.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
47.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
47.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
44.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
42.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
40.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
39.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
37.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
33.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
32.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
29.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
29.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
25.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
24.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
23.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
22.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
22.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
19.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
16.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
15.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
13.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
12.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
12.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
8.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
8.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
7.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
5.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
5.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
3.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
2.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
2.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
2.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
C3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
553.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
2915.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
2011.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
1692.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
1676.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
1474.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
1430.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
1283.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
1246.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
1221.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
1182.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
1178.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
1133.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
1107.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
1064.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
1049.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
1041.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
1018.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
984.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
960.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
957.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
951.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
872.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
837.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
822.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
807.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
798.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
794.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
778.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
760.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
734.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
723.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
714.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
692.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
681.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
663.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
658.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
641.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
601.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
594.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
568.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
564.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
552.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
538.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
504.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
503.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
493.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
487.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
412.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
402.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
399.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
396.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
381.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
366.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
366.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
355.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
348.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
347.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
343.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
338.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
308.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
305.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
304.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
302.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
302.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
272.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
252.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
246.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
240.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
238.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
227.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
191.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
177.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
155.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
152.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
145.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
144.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
142.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
141.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
124.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
117.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
117.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
111.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
106.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
105.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
102.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
101.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
89.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
87.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
78.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
73.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
72.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
67.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
58.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
56.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
54.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
42.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
32.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
29.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
14.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
C3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
426.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
2972.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
2583.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
2568.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
2483.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
2273.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
2145.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
2133.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
1959.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
1913.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
1833.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
1766.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
1765.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
1693.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
1691.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
1641.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
1605.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
1594.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
1591.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
1583.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
1523.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
1429.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
1417.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
1411.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
1386.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
1316.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
1276.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
1264.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
1257.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
1243.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
1203.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
1201.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
1163.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
1144.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
1122.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
1121.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
1092.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
1085.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
1085.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
1081.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
1075.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
1062.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
1035.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
1002.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
989.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
988.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
873.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
854.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
836.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
791.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
781.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
778.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
761.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
742.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
728.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
715.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
705.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
676.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
629.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
628.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
611.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
581.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
574.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
555.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
539.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
537.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
525.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
522.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
521.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
489.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
480.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
474.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
471.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
470.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
469.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
468.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
466.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
454.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
446.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
426.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
415.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
414.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
404.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
404.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
400.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
399.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
385.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
382.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
379.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
368.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
366.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
364.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
356.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
355.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
353.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
344.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
340.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
334.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
333.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
330.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
329.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
320.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
310.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
309.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
308.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
306.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
304.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
290.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
289.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
285.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
282.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
282.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
281.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
280.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
278.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
277.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
274.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
272.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
264.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
262.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
256.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
256.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
254.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
254.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
253.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
248.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
247.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
246.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
242.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
241.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
230.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
228.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
226.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
222.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
219.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
215.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
207.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
207.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
202.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
202.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
200.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
198.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
198.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
196.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
195.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
195.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
195.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
188.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
182.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
175.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
175.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
171.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
171.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
170.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
169.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
167.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
167.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
167.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
164.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
160.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
156.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
156.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
156.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
153.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
151.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
151.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
145.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
140.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
139.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
135.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
135.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
133.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
133.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
132.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
129.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
129.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
129.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
129.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
128.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
125.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
124.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
122.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
122.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
119.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
117.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
116.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
116.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
114.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
114.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
113.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
113.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
112.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
111.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
110.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
110.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
107.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
104.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
104.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
103.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
101.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
100.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
100.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
100.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
99.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
99.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
97.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
94.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
93.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
89.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
88.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
81.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
80.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
79.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
77.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
77.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
74.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
72.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
71.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
70.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
70.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
70.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
69.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
68.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
66.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
65.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
64.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
62.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
62.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
61.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
60.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
60.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
59.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
57.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
56.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
56.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
55.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
55.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
53.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
53.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
51.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
50.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
49.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
47.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
47.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
46.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
42.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
42.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
41.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
40.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
39.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
38.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
37.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
37.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
35.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
35.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
34.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
34.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
34.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
32.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
31.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
31.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
30.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
30.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
29.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
28.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
28.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
28.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
27.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
24.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
20.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
20.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
19.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
17.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
16.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
14.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
14.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
14.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
12.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
12.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
11.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
10.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
8.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
7.6
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0063320003
Tumor
1.7
CPT0076330003
Tumor
1.6
CPT0064370003
Tumor
1.4
CPT0065930003
Tumor
1.4
CPT0066480003
Tumor
1.3
CPT0063630003
Tumor
1.2
CPT0089020003
Tumor
1.1
CPT0012550003
Tumor
1.0
CPT0000640003
Tumor
1.0
CPT0015910003
Tumor
1.0
CPT0086030003
Tumor
0.9
CPT0019130003
Tumor
0.9
CPT0006900003
Tumor
0.9
CPT0077310003
Tumor
0.9
CPT0069160003
Tumor
0.8
CPT0075170001
Normal
0.8
CPT0001220008
Tumor
0.8
CPT0087040003
Tumor
0.7
CPT0002350011
Tumor
0.7
CPT0076350001
Normal
0.7
CPT0069190001
Normal
0.7
CPT0001550001
Normal
0.6
CPT0081990003
Tumor
0.6
CPT0025110003
Tumor
0.6
CPT0014160003
Tumor
0.6
CPT0011240003
Tumor
0.6
CPT0092730003
Tumor
0.6
CPT0079510001
Normal
0.6
CPT0023690003
Tumor
0.6
CPT0079300001
Normal
0.5
CPT0078510003
Tumor
0.5
CPT0019990003
Tumor
0.5
CPT0066520001
Normal
0.5
CPT0011410003
Tumor
0.5
CPT0065750003
Tumor
0.5
CPT0000780007
Tumor
0.5
CPT0012900004
Tumor
0.5
CPT0079230003
Tumor
0.5
CPT0088780001
Normal
0.5
CPT0088480003
Tumor
0.5
CPT0065690003
Tumor
0.5
CPT0078930003
Tumor
0.4
CPT0088760003
Tumor
0.4
CPT0075720003
Tumor
0.4
CPT0007860003
Tumor
0.4
CPT0075560003
Tumor
0.3
CPT0081880003
Tumor
0.3
CPT0092790003
Tumor
0.3
CPT0010120001
Normal
0.3
CPT0012570003
Normal
0.3
CPT0065870003
Tumor
0.3
CPT0025230003
Tumor
0.3
CPT0012920003
Normal
0.3
CPT0025170003
Tumor
0.3
CPT0009020003
Normal
0.2
CPT0084560003
Tumor
0.2
CPT0088640003
Normal
0.2
CPT0089480003
Normal
0.2
CPT0087050003
Normal
0.2
CPT0086970003
Normal
0.2
CPT0075130003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0088900003
Tumor
0.2
CPT0007470001
Normal
0.2
CPT0000870016
Tumor
0.2
CPT0019160001
Normal
0.1
CPT0085670003
Tumor
0.1
CPT0001350001
Normal
0.1
CPT0089040001
Normal
0.1
CPT0012640003
Normal
0.1
CPT0092290003
Tumor
0.1
CPT0078840001
Normal
0.1
CPT0001500009
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0079380003
Tumor
0.1
CPT0063330001
Normal
0.1
CPT0002370001
Normal
0.1
CPT0078670001
Normal
0.1
CPT0077320001
Normal
0.1
CPT0092190003
Normal
0.0
CPT0007320003
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0012090003
Normal
N/A
CPT0018250001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0071150004
Tumor
0.0
CPT0025580004
Tumor
0.0
CPT0069000003
Tumor
0.0
CPT0025050003
Tumor
-0.1
CPT0017410003
Tumor
-0.1
CPT0079480003
Tumor
-0.1
CPT0025920001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0001260009
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0012080003
Tumor
-0.1
CPT0025060001
Normal
-0.1
CPT0020120003
Tumor
-0.1
CPT0001510001
Normal
-0.1
CPT0066470004
Tumor
-0.1
CPT0088920001
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0017850003
Tumor
-0.2
CPT0077490003
Tumor
-0.2
CPT0006730001
Normal
-0.2
CPT0069010001
Normal
-0.2
CPT0079410003
Tumor
-0.2
CPT0014370004
Tumor
-0.2
CPT0092160003
Tumor
-0.2
CPT0079000001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0065430003
Tumor
-0.2
CPT0064400001
Normal
-0.2
CPT0086360003
Tumor
-0.2
CPT0015730003
Tumor
-0.2
CPT0020020001
Normal
-0.2
CPT0006440003
Tumor
-0.2
CPT0075570001
Normal
-0.2
CPT0088690003
Tumor
-0.2
CPT0088630003
Tumor
-0.3
CPT0014350001
Normal
-0.3
CPT0024680001
Normal
-0.3
CPT0025880003
Tumor
-0.3
CPT0081600003
Tumor
-0.3
CPT0092310003
Normal
-0.3
CPT0089460004
Tumor
-0.3
CPT0007870001
Normal
-0.3
CPT0012370003
Tumor
-0.3
CPT0078830003
Tumor
-0.3
CPT0065810003
Tumor
-0.3
CPT0025350003
Tumor
-0.3
CPT0014470001
Normal
-0.3
CPT0010110003
Tumor
-0.4
CPT0000890001
Normal
-0.4
CPT0012290003
Normal
-0.4
CPT0025290003
Tumor
-0.4
CPT0012280003
Tumor
-0.4
CPT0086870003
Tumor
-0.4
CPT0001340003
Tumor
-0.4
CPT0001190001
Normal
-0.4
CPT0088500001
Normal
-0.4
CPT0086830003
Normal
-0.4
CPT0079430001
Normal
-0.4
CPT0063640001
Normal
-0.4
CPT0078660003
Tumor
-0.4
CPT0001230001
Normal
-0.4
CPT0012770003
Normal
-0.4
CPT0012670003
Tumor
-0.5
CPT0078530001
Normal
-0.5
CPT0077500001
Normal
-0.5
CPT0023710001
Normal
-0.5
CPT0092800003
Normal
-0.5
CPT0088710001
Normal
-0.5
CPT0086820003
Tumor
-0.5
CPT0020130001
Normal
-0.5
CPT0082010001
Normal
-0.5
CPT0010160003
Tumor
-0.5
CPT0006950001
Normal
-0.5
CPT0065820001
Normal
-0.5
CPT0088570001
Normal
-0.5
CPT0006530001
Normal
-0.5
CPT0001270001
Normal
-0.5
CPT0009080003
Normal
-0.5
CPT0023350003
Tumor
-0.6
CPT0002270011
Tumor
-0.6
CPT0066430001
Normal
-0.6
CPT0017450001
Normal
-0.6
CPT0078940001
Normal
-0.6
CPT0065450001
Normal
-0.6
CPT0010170001
Normal
-0.7
CPT0025610001
Normal
-0.7
CPT0092740003
Normal
-0.7
CPT0024670003
Tumor
-0.7
CPT0078990003
Tumor
-0.7
CPT0000790001
Normal
-0.7
CPT0001540009
Tumor
-0.7
CPT0026420001
Normal
-0.8
CPT0014450004
Tumor
-0.8
CPT0086950003
Tumor
-0.8
CPT0009060003
Tumor
-0.8
CPT0077110003
Tumor
-0.8
CPT0023360001
Normal
-0.8
CPT0079270003
Tumor
-0.9
CPT0001180009
Tumor
-1.0
CPT0088970003
Tumor
-1.1
CPT0079180003
Tumor
-1.1
CPT0012180003
Tumor
-1.2
CPT0000660001
Normal
-1.3
CPT0026410003
Tumor
-1.3
CPT0088550004
Tumor
-1.4
CPT0078800003
Tumor
-1.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
