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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
C3 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
2175.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
7613.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
5659.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
5529.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
5423.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
5420.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
5371.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
5361.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
5304.6
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
5252.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
5251.9
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
5199.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
5080.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
5071.5
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
5050.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
5037.4
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
5030.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
5009.9
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
4932.0
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
4861.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
4672.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
4539.6
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
4517.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
4451.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
4328.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
4290.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
4231.1
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
4218.9
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
4137.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
4077.7
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
4062.7
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
4015.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
4005.8
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
3981.9
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
3956.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
3906.4
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
3811.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
3807.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
3805.6
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
3768.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
3707.4
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
3699.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
3695.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
3694.0
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
3677.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
3657.1
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
3646.0
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
3639.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
3616.8
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
3613.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
3599.3
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
3595.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
3594.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
3589.6
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
3566.5
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
3524.1
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
3513.7
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
3510.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
3492.4
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
3486.4
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
3469.4
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
3439.2
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
3414.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
3390.4
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
3390.0
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
3370.8
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
3361.0
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
3334.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
3322.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
3303.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
3280.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
3254.7
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
3240.6
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
3235.4
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
3234.9
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
3202.0
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
3201.2
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
3190.6
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
3126.2
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
3125.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
3095.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
3088.1
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
3068.4
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
3062.2
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
3056.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
3047.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
3043.7
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
3037.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
3036.5
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
3011.3
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
3006.9
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
3000.9
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
2985.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
2969.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
2960.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
2932.6
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
2917.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
2916.2
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
2914.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
2905.9
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
2896.8
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
2869.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
2861.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
2860.6
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
2857.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
2856.5
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
2821.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
2820.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
2780.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
2778.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
2776.6
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
2768.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
2747.3
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
2740.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
2737.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
2733.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
2717.4
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
2716.4
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
2716.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
2714.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
2705.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
2698.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
2694.9
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
2688.4
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
2684.1
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
2680.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
2672.7
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
2640.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
2608.9
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
2602.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
2597.8
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
2596.8
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
2586.9
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
2583.5
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
2574.3
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
2527.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
2523.7
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
2522.3
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
2508.8
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
2507.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
2484.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
2482.9
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
2477.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
2456.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
2403.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
2396.9
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
2387.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
2374.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
2371.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
2326.1
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
2312.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
2304.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
2300.0
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
2291.4
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
2291.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
2290.7
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
2282.8
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
2254.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
2253.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
2219.8
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
2215.0
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
2214.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
2211.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
2207.9
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
2202.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
2197.7
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
2192.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
2182.3
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
2160.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
2146.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
2114.3
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
2114.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
2109.1
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
2107.1
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
2104.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
2093.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
2092.8
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
2091.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
2090.3
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
2075.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
2075.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
2053.2
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
2031.9
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
2031.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
2025.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
2023.2
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
2011.3
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
2004.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
1985.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
1983.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
1982.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
1976.6
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
1972.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
1966.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
1963.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
1962.2
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
1953.3
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
1919.1
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
1918.7
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
1907.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
1896.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
1892.2
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
1889.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
1885.1
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
1876.8
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
1863.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
1861.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1832.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
1829.5
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
1825.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
1824.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
1809.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
1804.6
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
1804.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
1790.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
1782.9
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
1762.5
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
1742.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
1723.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
1722.3
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
1713.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
1679.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
1676.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
1670.8
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
1667.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
1664.8
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
1648.0
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
1637.6
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
1613.7
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
1611.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
1599.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
1595.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
1594.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
1582.1
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
1563.7
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
1546.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
1545.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
1530.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
1511.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
1495.2
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
1488.7
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
1482.8
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
1475.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
1455.9
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
1448.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
1418.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
1416.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
1412.2
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
1410.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
1400.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
1363.7
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
1363.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
1360.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
1358.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
1348.3
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
1335.0
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
1326.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
1302.8
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
1280.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
1272.5
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
1250.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
1221.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
1220.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
1196.6
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
1191.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
1185.0
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
1174.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
1170.5
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
1140.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
1129.2
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
1126.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
1108.1
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
1102.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
1100.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
1097.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
1075.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
1053.7
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
1052.6
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
1029.0
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
1023.6
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
1014.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
1002.2
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
993.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
987.9
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
984.4
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
974.5
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
926.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
923.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
915.4
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
910.7
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
903.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
902.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
889.0
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
877.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
859.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
847.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
847.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
835.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
828.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
816.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
816.8
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
813.7
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
811.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
791.6
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
786.6
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
781.7
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
780.8
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
749.4
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
735.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
725.9
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
725.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
719.1
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
709.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
685.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
675.1
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
674.5
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
673.8
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
665.4
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
657.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
656.8
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
648.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
638.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
637.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
628.5
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
622.2
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
621.8
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
612.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
579.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
578.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
555.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
534.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
529.0
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
525.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
516.1
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
507.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
474.3
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
469.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
461.3
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
393.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
388.8
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
387.6
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
371.1
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
364.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
361.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
344.4
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
342.3
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
332.2
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
327.2
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
326.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
316.8
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
304.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
274.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
184.8
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
182.7
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
147.8
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
144.2
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
116.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
106.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
97.2
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
58.8
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
20.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
8.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
C3 is potential prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1982.6
Number of samples
231
Samples
Sample
Description
TPM
DO50807
0 years, male, NA, stage:1, alive, 540 days
6282.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
5823.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
5632.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
5480.2
DO23518
0 years, male, NA, stage:2, alive, 1320 days
5301.9
DO50819
0 years, female, NA, stage:2, alive, 510 days
5218.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
5008.9
DO45137
0 years, male, NA, stage:1, alive, 1320 days
4880.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
4454.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
4332.8
DO45096
0 years, male, NA, stage:2, dead, 1290 days
4218.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
4206.8
DO45199
0 years, female, NA, stage:2, alive, 1350 days
4205.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
4173.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
4153.9
DO23536
0 years, male, NA, stage:2, alive, 930 days
3971.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
3943.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
3729.3
DO23539
0 years, male, NA, stage:1, alive, 1110 days
3659.5
DO48727
0 years, female, NA, stage:2, dead, 390 days
3640.6
DO50822
0 years, male, NA, stage:2, alive, 510 days
3543.7
DO45239
0 years, male, NA, stage:2, alive, 870 days
3521.2
DO50818
0 years, male, NA, stage:2, alive, 510 days
3471.7
DO45289
0 years, female, NA, stage:3, alive, 360 days
3447.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
3387.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
3255.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
3217.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
3211.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
3174.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
3145.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
3129.4
DO50800
0 years, male, NA, stage:2, alive, 510 days
3102.8
DO48679
0 years, male, NA, stage:2, alive, 1200 days
3088.4
DO50776
0 years, male, NA, stage:1, alive, 690 days
3088.1
DO45115
0 years, male, NA, stage:2, alive, 840 days
3063.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
3062.7
DO45213
0 years, male, NA, stage:1, alive, 1200 days
3060.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
3059.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
3039.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
3000.2
DO45109
0 years, male, NA, stage:2, alive, 1590 days
2978.7
DO48742
0 years, male, NA, stage:2, alive, 600 days
2959.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
2912.0
DO23524
0 years, female, NA, stage:2, alive, 1050 days
2895.1
DO227801
0 years, female, NA, stage:1, alive, 660 days
2881.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
2871.8
DO45135
0 years, male, NA, stage:1, alive, 1410 days
2859.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
2850.6
DO48693
0 years, male, NA, stage:2, alive, 900 days
2842.5
DO50789
0 years, female, NA, stage:2, alive, 570 days
2841.2
DO50805
0 years, male, NA, stage:2, alive, 690 days
2840.6
DO48674
0 years, male, NA, stage:2, alive, 1260 days
2839.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
2819.8
DO48716
0 years, male, NA, stage:2, alive, 720 days
2798.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
2795.6
DO48732
0 years, male, NA, stage:3, alive, 630 days
2771.5
DO48761
0 years, male, NA, stage:2, alive, 870 days
2768.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
2728.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
2710.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
2709.5
DO45261
0 years, male, NA, stage:3, alive, 990 days
2701.8
DO227643
0 years, male, NA, stage:2, alive, 1260 days
2665.2
DO45227
0 years, female, NA, stage:2, alive, 1020 days
2604.5
DO50855
0 years, male, NA, stage:2, alive, 570 days
2583.5
DO23529
0 years, male, NA, stage:4, alive, 930 days
2571.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
2568.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
2534.1
DO50774
0 years, female, NA, stage:2, alive, 720 days
2530.0
DO45129
0 years, male, NA, stage:3, alive, 1470 days
2477.8
DO23512
0 years, male, NA, stage:1, alive, 1260 days
2473.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
2460.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
2393.2
DO45233
0 years, male, NA, stage:3, alive, 900 days
2367.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
2360.9
DO23515
0 years, male, NA, stage:2, alive, 1230 days
2354.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
2337.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
2334.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
2314.7
DO45181
0 years, female, NA, stage:2, alive, 1200 days
2292.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
2288.4
DO45163
0 years, male, NA, stage:2, alive, 960 days
2280.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
2280.1
DO23542
0 years, male, NA, stage:3, alive, 960 days
2278.6
DO45125
0 years, male, NA, stage:3, alive, 1680 days
2269.5
DO48743
0 years, female, NA, stage:2, alive, 570 days
2242.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
2235.7
DO50793
0 years, male, NA, stage:4, alive, 540 days
2216.8
DO45259
0 years, male, NA, stage:3, alive, 330 days
2205.9
DO45191
0 years, female, NA, stage:2, alive, 1200 days
2189.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
2184.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
2177.5
DO45141
0 years, male, NA, stage:2, alive, 1320 days
2165.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
2157.8
DO45189
0 years, female, NA, stage:2, alive, 1200 days
2143.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
2106.3
DO48712
0 years, male, NA, stage:2, alive, 810 days
2088.6
DO45165
0 years, male, NA, stage:2, alive, 690 days
2072.0
DO45215
0 years, male, NA, stage:2, alive, 1170 days
2062.1
DO45099
0 years, male, NA, stage:3, alive, 1590 days
2061.3
DO48715
0 years, female, NA, stage:2, dead, 690 days
2053.9
DO45201
0 years, male, NA, stage:1, alive, 900 days
2033.5
DO23533
0 years, male, NA, stage:2, alive, 900 days
2031.3
DO45113
0 years, male, NA, stage:3, alive, 1560 days
2030.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
2025.9
DO48717
0 years, male, NA, stage:4, dead, 180 days
2018.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
2004.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
2001.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
1994.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
1989.9
DO50803
0 years, female, NA, stage:1, alive, 540 days
1980.3
DO45101
0 years, male, NA, stage:2, alive, 1680 days
1930.6
DO48721
0 years, female, NA, stage:1, alive, 900 days
1921.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
1914.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
1908.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
1892.8
DO48746
0 years, male, NA, stage:3, alive, 570 days
1887.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
1867.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
1854.2
DO45105
0 years, male, NA, stage:1, alive, 1680 days
1802.9
DO45183
0 years, female, NA, stage:2, dead, 570 days
1778.8
DO45221
0 years, female, NA, stage:4, dead, 390 days
1773.7
DO23537
0 years, male, NA, stage:2, dead, 900 days
1767.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
1745.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
1743.4
DO50839
0 years, female, NA, stage:3, alive, 330 days
1735.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
1731.2
DO23525
0 years, male, NA, stage:4, alive, 1050 days
1679.7
DO50814
0 years, male, NA, stage:3, alive, 420 days
1674.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
1664.5
DO23548
0 years, female, NA, stage:1, alive, 840 days
1646.9
DO45203
0 years, female, NA, stage:2, alive, 1170 days
1627.3
DO45155
0 years, male, NA, stage:2, alive, 2160 days
1613.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
1595.5
DO23552
0 years, female, NA, stage:1, alive, 810 days
1574.5
DO45093
0 years, male, NA, stage:2, dead, 720 days
1570.7
DO23549
0 years, male, NA, stage:3, alive, 990 days
1561.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
1544.5
DO45153
0 years, female, NA, stage:2, alive, 1380 days
1541.1
DO45097
0 years, male, NA, stage:3, alive, 1620 days
1521.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
1518.9
DO23535
0 years, male, NA, stage:1, alive, 960 days
1504.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
1487.2
DO48720
0 years, female, NA, stage:2, alive, 570 days
1474.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
1468.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
1466.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
1446.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
1431.7
DO45255
0 years, male, NA, stage:3, alive, 720 days
1423.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
1423.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
1419.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
1411.1
DO50806
0 years, male, NA, stage:4, alive, 540 days
1409.6
DO45171
0 years, male, NA, stage:3, alive, 600 days
1404.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
1392.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
1369.1
DO45219
0 years, male, NA, stage:2, alive, 1080 days
1361.6
DO45175
0 years, male, NA, stage:2, alive, 1140 days
1357.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
1346.2
DO48682
0 years, female, NA, stage:3, dead, 120 days
1340.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
1338.1
DO48728
0 years, female, NA, stage:2, alive, 150 days
1332.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
1325.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
1323.5
DO45223
0 years, male, NA, stage:4, alive, 1020 days
1317.5
DO45265
0 years, male, NA, stage:3, alive, 1020 days
1307.8
DO48677
0 years, male, NA, stage:3, alive, 1140 days
1297.4
DO45275
0 years, male, NA, stage:3, dead, 10 days
1259.0
DO23511
0 years, female, NA, stage:3, dead, 180 days
1253.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
1244.8
DO50832
0 years, male, NA, stage:3, alive, 90 days
1238.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
1212.2
DO45267
0 years, male, NA, stage:3, dead, 570 days
1187.4
DO45161
0 years, male, NA, stage:2, dead, 540 days
1178.0
DO45305
0 years, male, NA, stage:4, alive, 300 days
1144.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
1138.6
DO50791
0 years, female, NA, stage:1, dead, 480 days
1120.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
1118.8
DO48723
0 years, male, NA, stage:1, alive, 600 days
1112.0
DO45273
0 years, male, NA, stage:2, alive, 480 days
1091.6
DO48741
0 years, male, NA, stage:3, alive, 240 days
1084.1
DO23546
0 years, male, NA, stage:2, alive, 1050 days
1057.4
DO23530
0 years, male, NA, stage:4, dead, 180 days
996.7
DO23521
0 years, male, NA, stage:3, alive, 1110 days
983.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
973.4
DO48719
0 years, male, NA, stage:2, alive, 690 days
971.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
949.6
DO45249
0 years, male, NA, stage:1, alive, 630 days
948.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
928.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
921.0
DO50778
0 years, male, NA, stage:4, alive, 630 days
915.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
887.9
DO23519
0 years, male, NA, stage:3, alive, 630 days
866.8
DO45185
0 years, male, NA, stage:2, alive, 600 days
862.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
814.4
DO23513
0 years, male, NA, stage:3, alive, 1200 days
812.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
799.6
DO48757
0 years, female, NA, stage:3, alive, 480 days
712.7
DO48759
0 years, male, NA, stage:3, alive, 720 days
698.0
DO45235
0 years, female, NA, stage:1, alive, 900 days
692.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
689.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
636.0
DO45209
0 years, male, NA, stage:4, alive, 1350 days
623.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
612.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
601.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
592.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
557.5
DO50829
0 years, male, NA, stage:3, alive, 570 days
520.1
DO48751
0 years, male, NA, stage:2, dead, 480 days
508.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
486.3
DO45303
0 years, female, NA, stage:3, alive, 990 days
473.7
DO45217
0 years, female, NA, stage:3, dead, 270 days
471.0
DO48681
0 years, male, NA, stage:2, alive, 900 days
469.3
DO50799
0 years, female, NA, stage:2, alive, 540 days
456.5
DO45283
0 years, male, NA, stage:3, alive, 510 days
443.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
403.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
402.9
DO50815
0 years, male, NA, stage:3, alive, 150 days
379.2
DO48672
0 years, male, NA, stage:2, alive, 450 days
346.9
DO45245
0 years, female, NA, stage:2, dead, 240 days
273.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
243.8
DO45279
0 years, male, NA, stage:3, alive, 1290 days
202.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
199.0
DO45127
0 years, male, NA, stage:3, dead, 420 days
139.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
137.9
DO50785
0 years, male, NA, stage:4, dead, 90 days
98.4
DO45287
0 years, male, NA, stage:1, alive, 390 days
86.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
42.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
41.1
DO45211
0 years, male, NA, stage:3, alive, 240 days
21.9
DO45299
0 years, female, NA, stage:1, alive, 1440 days
20.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
6.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
863
Tumor
1.3
877
Tumor
1.2
113
Tumor
1.1
192
Normal
1.1
395
Tumor
1.0
131
Tumor
0.8
227
Tumor
0.8
1045
Tumor
0.8
425
Tumor
0.8
375
Tumor
0.7
527
Tumor
0.7
665
Tumor
0.6
743
Tumor
0.6
777
Tumor
0.6
311
Tumor
0.6
224
Normal
0.6
223
Tumor
0.5
785
Tumor
0.5
217
Tumor
0.5
778
Normal
0.4
487
Tumor
0.4
384
Normal
0.4
884
Normal
0.4
218
Normal
0.4
697
Tumor
0.4
343
Tumor
0.4
823
Tumor
0.4
671
Tumor
0.4
393
Tumor
0.4
392
Normal
0.4
672
Normal
0.4
444
Normal
0.4
536
Normal
0.3
461
Tumor
0.3
615
Tumor
0.3
142
Normal
0.3
396
Normal
0.3
135
Tumor
0.3
813
Tumor
0.3
286
Normal
0.3
1022
Normal
0.3
523
Tumor
0.3
526
Normal
0.3
517
Tumor
0.3
514
Normal
0.3
573
Tumor
0.3
364
Normal
0.2
964
Normal
0.2
713
Tumor
0.2
553
Tumor
0.2
297
Tumor
0.2
391
Tumor
0.2
498
Normal
0.2
431
Tumor
0.2
647
Tumor
0.2
414
Normal
0.2
445
Tumor
0.2
141
Tumor
0.2
545
Tumor
0.2
916
Normal
0.2
1025
Tumor
0.2
723
Tumor
0.2
546
Normal
0.2
471
Tumor
0.2
424
Normal
0.2
881
Tumor
0.2
968
Normal
0.2
363
Tumor
0.2
195
Tumor
0.2
1046
Normal
0.2
1044
Normal
0.2
221
Tumor
0.2
963
Tumor
0.2
228
Normal
0.2
866
Normal
0.2
428
Normal
0.2
696
Normal
0.2
857
Tumor
0.2
353
Tumor
0.2
354
Normal
0.2
558
Normal
0.2
926
Normal
0.2
967
Tumor
0.2
277
Tumor
0.2
327
Tumor
0.2
137
Tumor
0.2
124
Normal
0.2
1016
Normal
0.2
426
Normal
0.2
568
Normal
0.2
212
Normal
0.2
111
Normal
0.2
742
Normal
0.2
447
Tumor
0.2
528
Normal
0.2
915
Tumor
0.2
352
Normal
0.2
524
Normal
0.1
191
Tumor
0.1
271
Tumor
0.1
663
Tumor
0.1
574
Normal
0.1
636
Normal
0.1
921
Tumor
0.1
737
Tumor
0.1
1042
Normal
0.1
423
Tumor
0.1
618
Normal
0.1
1026
Normal
0.1
448
Normal
0.1
455
Tumor
0.1
746
Normal
0.1
816
Normal
0.1
328
Normal
0.1
432
Normal
0.1
914
Normal
0.1
817
Tumor
0.1
954
Normal
0.1
922
Normal
0.1
464
Normal
0.1
686
Normal
0.1
744
Normal
0.1
975
Tumor
0.1
635
Tumor
0.1
138
Normal
0.1
981
Tumor
0.1
868
Normal
0.1
394
Normal
0.1
474
Normal
0.1
446
Normal
0.1
756
Normal
0.1
383
Tumor
0.1
666
Normal
0.1
515
Tumor
0.1
1015
Tumor
0.1
186
Normal
0.1
342
Normal
0.1
368
Normal
0.1
535
Tumor
0.1
114
Normal
0.1
196
Normal
0.1
518
Normal
0.1
146
Normal
0.1
261
Tumor
0.1
862
Normal
0.1
386
Normal
0.1
422
Normal
0.1
452
Normal
0.1
365
Tumor
0.1
648
Normal
0.1
616
Normal
0.1
564
Normal
0.1
262
Normal
0.1
716
Normal
0.1
882
Normal
0.1
642
Normal
0.1
284
Normal
0.1
956
Normal
0.1
462
Normal
0.1
468
Normal
0.1
818
Normal
0.1
755
Tumor
0.0
355
Tumor
0.0
572
Normal
0.0
285
Tumor
0.0
851
Tumor
0.0
132
Normal
0.0
148
Normal
0.0
852
Normal
0.0
958
Normal
0.0
727
Tumor
0.0
538
Normal
0.0
924
Normal
0.0
741
Tumor
0.0
492
Normal
0.0
662
Normal
0.0
467
Tumor
0.0
472
Normal
0.0
858
Normal
0.0
982
Normal
0.0
494
Normal
0.0
786
Normal
0.0
145
Tumor
0.0
814
Normal
0.0
488
Normal
0.0
878
Normal
0.0
232
Normal
0.0
332
Normal
0.0
874
Normal
0.0
1021
Tumor
0.0
456
Normal
0.0
641
Tumor
0.0
728
Normal
0.0
331
Tumor
0.0
162
Normal
0.0
864
Normal
0.0
983
Tumor
0.0
188
Normal
0.0
222
Normal
0.0
388
Normal
0.0
918
Normal
0.0
187
Tumor
0.0
722
Normal
0.0
358
Normal
0.0
917
Tumor
0.0
1041
Tumor
-0.1
516
Normal
-0.1
344
Normal
-0.1
738
Normal
-0.1
938
Normal
-0.1
376
Normal
-0.1
112
Tumor
-0.1
1028
Normal
-0.1
466
Normal
-0.1
1014
Normal
-0.1
214
Normal
-0.1
463
Tumor
-0.1
258
Normal
-0.1
824
Normal
-0.1
314
Normal
-0.1
883
Tumor
-0.1
491
Tumor
-0.1
554
Normal
-0.1
126
Normal
-0.1
436
Normal
-0.1
136
Normal
-0.1
312
Normal
-0.1
534
Normal
-0.1
484
Normal
-0.1
953
Tumor
-0.1
944
Normal
-0.1
362
Normal
-0.1
421
Tumor
-0.1
361
Tumor
-0.1
664
Normal
-0.1
172
Normal
-0.1
557
Tumor
-0.1
617
Tumor
-0.1
478
Normal
-0.1
955
Tumor
-0.1
366
Normal
-0.1
873
Tumor
-0.1
482
Normal
-0.1
298
Normal
-0.1
451
Tumor
-0.1
563
Tumor
-0.1
937
Tumor
-0.2
628
Normal
-0.2
695
Tumor
-0.2
481
Tumor
-0.2
913
Tumor
-0.2
497
Tumor
-0.2
571
Tumor
-0.2
1043
Tumor
-0.2
341
Tumor
-0.2
966
Normal
-0.2
627
Tumor
-0.2
356
Normal
-0.2
125
Tumor
-0.2
745
Tumor
-0.2
976
Normal
-0.2
268
Normal
-0.2
147
Tumor
-0.2
412
Normal
-0.2
278
Normal
-0.2
1032
Normal
-0.2
185
Tumor
-0.2
912
Normal
-0.2
272
Normal
-0.2
984
Normal
-0.2
525
Tumor
-0.2
925
Tumor
-0.2
978
Normal
-0.2
952
Normal
-0.2
977
Tumor
-0.2
465
Tumor
-0.2
513
Tumor
-0.2
434
Normal
-0.2
443
Tumor
-0.2
715
Tumor
-0.3
714
Normal
-0.3
721
Tumor
-0.3
867
Tumor
-0.3
416
Normal
-0.3
943
Tumor
-0.3
283
Tumor
-0.3
865
Tumor
-0.3
413
Tumor
-0.3
128
Normal
-0.4
427
Tumor
-0.4
698
Normal
-0.4
861
Tumor
-0.4
385
Tumor
-0.4
415
Tumor
-0.4
483
Tumor
-0.4
123
Tumor
-0.4
923
Tumor
-0.5
685
Tumor
-0.5
724
Normal
-0.5
367
Tumor
-0.5
257
Tumor
-0.5
433
Tumor
-0.5
477
Tumor
-0.5
411
Tumor
-0.5
911
Tumor
-0.5
351
Tumor
-0.5
387
Tumor
-0.5
267
Tumor
-0.5
567
Tumor
-0.5
1031
Tumor
-0.6
161
Tumor
-0.6
213
Tumor
-0.6
1027
Tumor
-0.6
951
Tumor
-0.6
493
Tumor
-0.7
313
Tumor
-0.7
815
Tumor
-0.7
1013
Tumor
-0.7
435
Tumor
-0.7
357
Tumor
-0.8
533
Tumor
-0.8
965
Tumor
-0.8
957
Tumor
-0.9
473
Tumor
-0.9
127
Tumor
-0.9
171
Tumor
-1.0
211
Tumor
-1.0
537
Tumor
-1.1
231
Tumor
-1.2
661
Tumor
-1.4
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.