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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RNF113A is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
23.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
18.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
16.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
14.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
14.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
14.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
14.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
13.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
13.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
12.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
12.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
12.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
12.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
11.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
11.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
11.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
11.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
11.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
11.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
11.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
10.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
10.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
10.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
10.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
10.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
10.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
10.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
9.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
9.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
9.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
9.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
9.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
9.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
9.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
8.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
8.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
8.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
8.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
8.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
8.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
7.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
7.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
7.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
7.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
7.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
7.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
7.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
6.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
6.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
6.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
6.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
6.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
6.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
5.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
5.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
5.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
5.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
5.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
5.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
3.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
2.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
2.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RNF113A is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
40.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
32.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
28.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
28.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
27.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
25.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
24.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
22.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
22.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
22.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
22.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
21.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
21.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
21.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
21.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
21.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
21.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
21.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
20.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
20.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
20.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
20.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
20.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
20.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
20.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
20.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
20.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
20.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
20.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
20.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
20.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
20.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
20.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
19.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
19.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
19.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
19.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
19.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
19.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
19.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
19.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
19.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
19.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
19.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
19.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
19.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
19.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
19.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
19.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
19.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
19.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
19.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
18.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
18.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
18.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
18.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
18.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
18.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
18.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
18.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
18.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
18.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
18.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
18.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
18.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
18.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
18.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
18.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
18.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
18.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
18.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
18.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
18.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
18.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
17.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
17.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
17.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
17.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
17.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
17.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
17.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
17.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
17.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
17.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
17.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
17.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
17.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
17.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
17.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
17.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
17.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
17.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
17.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
17.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
17.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
17.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
17.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
17.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
17.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
17.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
17.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
17.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
17.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
16.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
16.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
16.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
16.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
16.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
16.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
16.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
16.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
16.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
16.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
16.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
16.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
16.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
16.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
16.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
16.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
16.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
16.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
16.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
16.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
16.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
16.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
16.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
16.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
16.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
16.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
16.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
16.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
16.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
16.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
16.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
16.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
16.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
16.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
16.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
16.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
16.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
16.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
16.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
16.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
16.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
16.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
16.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
16.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
16.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
16.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
16.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
16.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
16.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
16.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
15.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
15.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
15.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
15.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
15.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
15.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
15.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
15.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
15.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
15.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
15.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
15.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
15.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
15.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
15.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
15.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
15.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
15.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
15.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
15.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
15.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
15.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
15.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
15.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
15.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
15.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
15.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
15.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
15.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
15.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
15.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
15.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
15.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
15.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
15.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
15.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
15.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
15.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
15.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
15.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
15.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
15.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
15.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
15.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
15.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
15.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
15.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
15.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
15.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
15.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
15.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
14.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
14.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
14.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
14.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
14.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
14.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
14.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
14.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
14.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
14.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
14.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
14.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
14.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
14.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
14.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
14.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
14.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
14.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
14.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
14.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
14.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
14.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
14.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
14.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
14.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
14.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
14.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
14.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
14.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
14.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
14.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
14.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
14.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
14.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
14.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
14.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
14.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
14.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
14.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
14.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
14.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
14.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
14.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
14.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
14.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
14.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
14.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
14.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
14.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
14.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
14.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
14.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
14.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
14.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
14.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
14.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
14.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
14.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
14.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
14.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
14.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
14.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
14.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
14.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
14.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
14.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
14.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
14.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
14.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
14.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
13.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
13.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
13.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
13.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
13.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
13.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
13.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
13.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
13.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
13.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
13.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
13.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
13.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
13.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
13.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
13.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
13.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
13.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
13.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
13.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
13.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
13.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
13.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
13.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
13.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
13.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
13.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
13.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
13.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
13.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
13.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
13.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
13.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
13.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
13.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
13.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
13.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
13.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
13.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
13.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
13.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
13.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
13.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
13.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
13.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
13.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
13.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
13.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
13.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
13.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
13.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
13.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
13.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
13.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
13.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
12.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
12.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
12.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
12.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
12.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
12.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
12.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
12.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
12.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
12.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
12.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
12.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
12.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
12.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
12.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
12.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
12.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
12.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
12.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
12.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
12.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
12.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
12.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
12.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
12.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
12.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
12.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
12.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
12.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
12.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
12.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
12.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
12.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
12.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
12.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
12.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
12.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
12.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
12.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
12.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
12.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
12.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
12.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
12.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
12.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
12.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
12.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
12.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
12.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
12.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
12.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
12.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
12.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
12.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
12.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
12.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
12.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
12.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
12.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
12.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
12.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
12.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
11.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
11.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
11.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
11.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
11.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
11.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
11.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
11.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
11.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
11.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
11.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
11.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
11.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
11.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
11.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
11.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
11.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
11.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
11.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
11.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
11.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
11.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
11.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
11.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
11.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
11.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
11.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
11.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
11.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
11.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
11.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
11.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
11.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
11.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
11.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
11.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
11.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
11.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
11.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
10.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
10.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
10.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
10.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
10.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
10.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
10.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
10.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
10.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
10.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
10.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
10.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
10.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
10.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
10.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
10.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
10.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
10.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
10.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
10.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
10.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
10.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
10.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
10.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
10.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
10.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
10.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
10.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
10.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
9.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
9.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
9.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
9.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
9.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
9.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
9.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
9.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
9.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
9.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
9.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
9.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
9.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
9.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
9.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
9.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
9.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
9.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
9.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
9.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
9.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
9.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
9.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
9.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
9.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
9.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
8.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
8.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
8.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
8.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
8.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
8.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
8.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
8.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
8.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
8.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
8.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
8.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
8.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
8.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
8.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
7.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
7.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
7.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
7.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
7.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
7.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
7.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
6.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
6.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
5.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
5.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
4.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
4.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
3.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RNF113A is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
37.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
26.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
25.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
25.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
22.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
21.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
20.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
20.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
20.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
19.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
19.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
19.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
19.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
18.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
18.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
18.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
18.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
18.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
18.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
18.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
18.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
18.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
18.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
17.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
17.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
17.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
17.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
17.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
17.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
17.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
17.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
17.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
16.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
16.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
16.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
16.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
16.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
16.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
16.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
16.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
16.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
16.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
15.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
15.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
15.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
15.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
15.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
15.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
15.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
15.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
15.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
15.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
15.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
15.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
14.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
14.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
14.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
14.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
14.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
13.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
13.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
13.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
13.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
13.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
13.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
13.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
13.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
13.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
13.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
13.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
13.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
13.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
13.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
13.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
13.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
13.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
13.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
12.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
12.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
12.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
12.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
12.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
12.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
11.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
11.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
11.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
10.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
10.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
10.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
10.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
10.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
10.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
10.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
9.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
9.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
9.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
8.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
8.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
6.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RNF113A is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
36.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
33.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
30.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
29.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
28.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
24.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
22.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
22.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
22.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
21.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
20.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
20.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
19.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
19.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
19.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
18.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
18.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
18.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
18.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
18.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
18.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
17.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
17.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
17.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
17.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
17.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
17.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
17.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
17.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
17.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
16.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
16.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
16.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
16.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
16.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
16.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
16.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
16.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
15.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
15.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
15.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
15.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
15.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
15.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
15.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
15.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
15.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
15.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
15.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
15.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
14.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
14.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
14.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
14.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
14.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
14.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
14.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
14.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
14.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
14.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
14.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
14.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
14.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
14.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
14.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
14.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
13.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
13.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
13.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
13.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
13.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
13.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
13.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
13.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
13.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
13.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
13.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
13.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
13.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
13.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
13.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
13.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
12.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
12.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
12.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
12.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
12.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
12.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
12.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
12.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
12.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
12.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
12.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
12.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
12.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
12.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
12.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
12.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
12.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
12.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
12.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
12.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
12.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
12.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
12.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
12.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
12.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
12.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
12.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
12.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
11.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
11.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
11.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
11.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
11.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
11.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
11.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
11.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
11.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
11.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
11.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
11.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
11.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
11.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
11.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
11.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
11.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
11.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
11.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
11.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
11.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
11.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
11.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
11.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
11.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
11.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
11.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
11.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
11.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
11.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
11.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
10.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
10.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
10.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
10.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
10.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
10.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
10.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
10.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
10.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
10.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
10.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
10.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
10.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
10.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
10.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
10.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
10.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
10.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
10.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
10.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
10.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
10.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
10.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
10.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
10.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
10.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
10.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
10.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
10.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
10.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
10.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
10.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
10.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
10.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
10.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
10.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
10.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
10.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
9.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
9.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
9.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
9.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
9.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
9.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
9.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
9.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
9.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
9.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
9.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
9.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
9.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
9.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
9.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
9.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
9.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
9.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
9.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
9.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
9.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
9.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
9.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
8.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
8.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
8.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
8.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
8.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
8.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
8.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
8.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
8.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
8.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
8.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
8.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
8.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
8.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
8.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
8.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
8.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
8.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
8.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
8.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
8.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
7.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
7.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
7.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
7.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
7.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
7.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
7.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
7.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
7.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
7.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
7.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
7.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
7.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
7.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
7.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
6.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
6.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
6.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
6.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
6.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
6.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
6.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
6.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
6.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
6.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
6.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
6.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
6.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
6.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
6.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
6.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
5.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
5.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
5.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
5.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
5.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
5.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
5.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
5.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
5.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
4.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
3.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
3.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
3.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
3.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
3.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
3.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
3.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
3.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
2.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
2.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
2.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
2.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
2.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088550004
Tumor
0.9
CPT0014450004
Tumor
0.6
CPT0086950003
Tumor
0.6
CPT0006440003
Tumor
0.6
CPT0001180009
Tumor
0.5
CPT0012180003
Tumor
0.5
CPT0017410003
Tumor
0.5
CPT0086870003
Tumor
0.5
CPT0078990003
Tumor
0.5
CPT0081990003
Tumor
0.5
CPT0001260009
Tumor
0.5
CPT0079380003
Tumor
0.5
CPT0001340003
Tumor
0.5
CPT0069160003
Tumor
0.4
CPT0002350011
Tumor
0.4
CPT0012900004
Tumor
0.4
CPT0065870003
Tumor
0.4
CPT0009060003
Tumor
0.4
CPT0026410003
Tumor
0.4
CPT0023350003
Tumor
0.4
CPT0078830003
Tumor
0.4
CPT0071150004
Tumor
0.3
CPT0086820003
Tumor
0.3
CPT0092190003
Normal
0.3
CPT0078930003
Tumor
0.3
CPT0015910003
Tumor
0.3
CPT0025350003
Tumor
0.3
CPT0025580004
Tumor
0.3
CPT0063320003
Tumor
0.3
CPT0092730003
Tumor
0.3
CPT0014370004
Tumor
0.3
CPT0085670003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0025230003
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0088900003
Tumor
0.3
CPT0066470004
Tumor
0.3
CPT0081600003
Tumor
0.3
CPT0006900003
Tumor
0.3
CPT0010160003
Tumor
0.3
CPT0089460004
Tumor
0.3
CPT0077110003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0092790003
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0000640003
Tumor
0.2
CPT0025050003
Tumor
0.2
CPT0075720003
Tumor
0.2
CPT0077320001
Normal
0.2
CPT0079300001
Normal
0.2
CPT0000870016
Tumor
0.2
CPT0081880003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0084560003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0079230003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0014160003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0001270001
Normal
0.1
CPT0065430003
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0088970003
Tumor
0.1
CPT0088480003
Tumor
0.1
CPT0009000003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0012370003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0012550003
Tumor
0.1
CPT0010120001
Normal
0.1
CPT0069000003
Tumor
0.1
CPT0012640003
Normal
0.1
CPT0000780007
Tumor
0.1
CPT0065690003
Tumor
0.1
CPT0089020003
Tumor
0.0
CPT0092290003
Tumor
0.0
CPT0015730003
Tumor
0.0
CPT0066480003
Tumor
0.0
CPT0084590001
Normal
0.0
CPT0021240003
Tumor
0.0
CPT0001500009
Tumor
0.0
CPT0025110003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0025610001
Normal
0.0
CPT0064370003
Tumor
0.0
CPT0075570001
Normal
0.0
CPT0018250001
Normal
0.0
CPT0078660003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0078800003
Tumor
0.0
CPT0012280003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0078940001
Normal
0.0
CPT0079510001
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0025290003
Tumor
-0.1
CPT0075560003
Tumor
-0.1
CPT0086890003
Normal
-0.1
CPT0012670003
Tumor
-0.1
CPT0065930003
Tumor
-0.1
CPT0012290003
Normal
-0.1
CPT0086030003
Tumor
-0.1
CPT0017850003
Tumor
-0.1
CPT0001230001
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0078530001
Normal
-0.1
CPT0065750003
Tumor
-0.1
CPT0063630003
Tumor
-0.1
CPT0088690003
Tumor
-0.1
CPT0078510003
Tumor
-0.1
CPT0063330001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0009080003
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0092740003
Normal
-0.1
CPT0002270011
Tumor
-0.1
CPT0006950001
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0009020003
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0012920003
Normal
-0.2
CPT0000790001
Normal
-0.2
CPT0077310003
Tumor
-0.2
CPT0001550001
Normal
-0.2
CPT0025170003
Tumor
-0.2
CPT0001190001
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0006730001
Normal
-0.2
CPT0063640001
Normal
-0.2
CPT0065450001
Normal
-0.2
CPT0076350001
Normal
-0.2
CPT0078670001
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0069010001
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0092800003
Normal
-0.2
CPT0020020001
Normal
-0.2
CPT0025920001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0010170001
Normal
-0.2
CPT0000890001
Normal
-0.2
CPT0079430001
Normal
-0.2
CPT0007860003
Tumor
-0.2
CPT0079180003
Tumor
-0.2
CPT0088710001
Normal
-0.3
CPT0076330003
Tumor
-0.3
CPT0092310003
Normal
-0.3
CPT0023710001
Normal
-0.3
CPT0024680001
Normal
-0.3
CPT0077500001
Normal
-0.3
CPT0012770003
Normal
-0.3
CPT0020120003
Tumor
-0.3
CPT0026420001
Normal
-0.3
CPT0011410003
Tumor
-0.3
CPT0088780001
Normal
-0.3
CPT0066430001
Normal
-0.3
CPT0013790003
Normal
-0.3
CPT0012570003
Normal
-0.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
