Expression of SSR1 in cervical cancer - The Human Protein Atlas

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SUMMARY

TISSUE

BRAIN

SINGLE CELL

SUBCELL

CANCER

BLOOD

CELL LINE

STRUCTURE

INTERACTION

SSR1

CERVICAL SQUAMOUS CELL CARCINOMA AND ENDOCERVICAL ADENOCARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

SSR1 is not prognostic in Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 55.97

Median expressionⁱ : 69.4

Median follow up timeⁱ : 1.96

P scoreⁱ 0.0080

5-year survival highⁱ 57%

5-year survival lowⁱ 84%

TCGA RNA samplesⁱ

Average pTPM

74.9

Number of samples

283

Samples

Sample	Description	pTPM
TCGA-EX-A449-01A	42 years, female, white, stage:Stage IVB, alive, 447 days	231.5
TCGA-C5-A1ML-01A	49 years, female, white, stage:Stage IB, dead, 636 days	210.0
TCGA-C5-A0TN-01A	21 years, female, black or african american, stage:Stage IB, dead, 348 days	206.7
TCGA-DS-A7WH-01A	34 years, female, white, stage:Stage IB, alive, 533 days	185.7
TCGA-LP-A4AU-01A	35 years, female, asian, stage:Stage IIIB, alive, 343 days	185.7
TCGA-DS-A1OC-01A	47 years, female, white, stage:Stage IB, alive, 376 days	183.8
TCGA-PN-A8MA-01A	43 years, female, black or african american, stage:Stage IIB, alive, 90 days	181.4
TCGA-C5-A2M1-01A	37 years, female, white, stage:Stage IB, alive, 1169 days	167.7
TCGA-EX-A69M-01A	62 years, female, white, stage:Stage IB, dead, 253 days	165.5
TCGA-FU-A5XV-01A	32 years, female, white, stage:Stage IIIB, alive, 321 days	162.2
TCGA-C5-A7CL-01A	48 years, female, white, stage:Stage IIIB, dead, 471 days	159.3
TCGA-DS-A1O9-01A	75 years, female, white, stage:Stage IVA, dead, 266 days	150.9
TCGA-VS-A9UL-01A	79 years, female, white, stage:Stage IIIB, dead, 442 days	145.4
TCGA-VS-A952-01A	66 years, female, white, stage:Stage IB, alive, 1778 days	145.1
TCGA-VS-A9UO-01A	43 years, female, white, stage:Stage IIB, alive, 1456 days	142.5
TCGA-VS-AA62-01A	51 years, female, white, stage:Stage IIB, dead, 469 days	141.1
TCGA-Q1-A73O-01A	37 years, female, stage:Stage IB, alive, 428 days	138.7
TCGA-VS-A9U6-01A	52 years, female, white, stage:Stage IVB, alive, 1320 days	138.4
TCGA-FU-A57G-01A	49 years, female, white, stage:Stage IB, alive, 1078 days	129.1
TCGA-EA-A5ZD-01A	40 years, female, asian, stage:Stage IB, alive, 830 days	128.9
TCGA-VS-A8EI-01A	38 years, female, white, stage:Stage IIB, alive, 729 days	126.9
TCGA-VS-A9UR-01A	53 years, female, white, stage:Stage IIA, alive, 793 days	125.2
TCGA-C5-A8YT-01A	36 years, female, white, stage:Stage IB, dead, 633 days	124.5
TCGA-EK-A2PK-01A	43 years, female, white, stage:Stage IB, alive, 12 days	122.4
TCGA-C5-A7CM-01A	35 years, female, white, stage:Stage IB, alive, 619 days	122.4
TCGA-EA-A5ZF-01A	56 years, female, asian, stage:Stage IB, alive, 828 days	121.4
TCGA-MA-AA3Y-01A	48 years, female, white, stage:Stage IB, alive, 542 days	120.9
TCGA-MA-AA3W-01A	54 years, female, white, stage:Stage IB, alive, 685 days	119.3
TCGA-C5-A8YR-01A	56 years, female, white, stage:Stage IB, dead, 837 days	115.8
TCGA-C5-A1MJ-01A	61 years, female, white, stage:Stage IB, dead, 14 days	115.6
TCGA-VS-A9V0-01A	58 years, female, stage:Stage IB, alive, 573 days	115.0
TCGA-VS-A9U5-01A	57 years, female, white, stage:Stage IIB, alive, 1535 days	114.8
TCGA-MY-A913-01A	28 years, female, black or african american, stage:Stage IIA, alive, 524 days	113.3
TCGA-JX-A3Q8-01A	40 years, female, asian, stage:Stage IB, alive, 1357 days	112.3
TCGA-C5-A1MP-01A	34 years, female, black or african american, stage:Stage IB, alive, 109 days	111.3
TCGA-EA-A439-01A	50 years, female, asian, stage:Stage IIA, alive, 965 days	110.6
TCGA-EA-A97N-01A	38 years, female, white, stage:Stage IB, alive, 11 days	110.0
TCGA-MA-AA3Z-01A	43 years, female, white, stage:Stage IB, alive, 595 days	109.6
TCGA-C5-A8XJ-01A	74 years, female, white, stage:Stage IB, alive, 4467 days	109.3
TCGA-C5-A1MI-01A	50 years, female, white, stage:Stage IB, dead, 1083 days	109.1
TCGA-EK-A2RJ-01A	51 years, female, white, stage:Stage IB, alive, 53 days	107.6
TCGA-C5-A1M9-01A	46 years, female, white, stage:Stage IB, dead, 1065 days	107.2
TCGA-BI-A0VS-01A	48 years, female, white, stage:Stage IB, alive, 1735 days	106.4
TCGA-VS-A94Z-01A	38 years, female, white, stage:Stage IIB, alive, 1015 days	106.1
TCGA-IR-A3LC-01A	40 years, female, white, stage:Stage IB, alive, 3935 days	105.9
TCGA-EA-A411-01A	50 years, female, white, stage:Stage IB, alive, 747 days	105.5
TCGA-FU-A2QG-01A	29 years, female, white, stage:Stage IB, alive, 579 days	104.2
TCGA-MA-AA43-01A	48 years, female, white, stage:Stage IIIB, alive, 346 days	104.1
TCGA-EK-A2RK-01A	67 years, female, white, stage:Stage IA, alive, 13 days	103.4
TCGA-DS-A1OB-01A	45 years, female, white, stage:Stage IB, dead, 861 days	103.2
TCGA-C5-A1M7-01A	37 years, female, white, stage:Stage IB, alive, 1409 days	103.1
TCGA-EA-A3HU-01A	43 years, female, white, stage:Stage II, alive, 1013 days	102.5
TCGA-C5-A3HE-01A	44 years, female, white, stage:Stage IB, alive, 548 days	101.3
TCGA-VS-A9V2-01A	29 years, female, white, stage:Stage IB, alive, 555 days	101.0
TCGA-JW-A5VH-01A	53 years, female, american indian or alaska native, stage:Stage IVB, dead, 100 days	100.7
TCGA-VS-A9V1-01A	46 years, female, white, stage:Stage IVB, dead, 157 days	100.3
TCGA-HM-A6W2-01A	34 years, female, black or african american, stage:Stage IVB, alive, 287 days	99.9
TCGA-FU-A23L-01A	60 years, female, white, stage:Stage IIA, alive, 725 days	99.8
TCGA-JW-AAVH-01A	46 years, female, white, stage:Stage IB, alive, 552 days	99.4
TCGA-VS-A9UQ-01A	32 years, female, stage:Stage IB, alive, 1263 days	99.1
TCGA-EK-A2PM-01A	81 years, female, white, stage:Stage IIB, alive, 18 days	98.4
TCGA-EK-A2H0-01A	24 years, female, white, stage:Stage IIB, alive, 1847 days	97.4
TCGA-EK-A3GK-01A	33 years, female, white, stage:Stage IB, alive, 15 days	97.2
TCGA-C5-A1MN-01A	42 years, female, white, stage:Stage IIIB, dead, 1245 days	97.1
TCGA-C5-A1BL-01A	32 years, female, white, stage:Stage IB, alive, 5271 days	97.0
TCGA-HM-A4S6-01A	51 years, female, white, stage:Stage IIIB, alive, 454 days	96.9
TCGA-C5-A2M2-01A	56 years, female, white, stage:Stage IB, dead, 1011 days	96.0
TCGA-C5-A8XK-01A	30 years, female, black or african american, stage:'--, alive, 3039 days	95.8
TCGA-EA-A3HS-01A	35 years, female, white, stage:Stage IB, alive, 959 days	93.7
TCGA-VS-A950-01A	42 years, female, stage:Stage IIIA, alive, 1221 days	92.8
TCGA-EA-A410-01A	51 years, female, white, stage:Stage IIA, alive, 803 days	92.2
TCGA-C5-A3HF-01A	24 years, female, white, stage:Stage IB, dead, 543 days	91.8
TCGA-JW-A5VG-01A	35 years, female, american indian or alaska native, stage:Stage IIA, alive, 834 days	91.7
TCGA-EX-A3L1-01A	32 years, female, white, stage:Stage IIA, alive, 463 days	91.6
TCGA-C5-A1BJ-01A	34 years, female, white, stage:Stage IIB, alive, 4385 days	91.1
TCGA-EX-A8YF-01A	44 years, female, white, stage:Stage IB, alive, 473 days	90.1
TCGA-IR-A3LH-01A	49 years, female, black or african american, stage:Stage IIA, alive, 2394 days	90.0
TCGA-C5-A905-01A	37 years, female, black or african american, stage:Stage IB, alive, 4879 days	89.9
TCGA-C5-A1M5-01A	53 years, female, white, stage:Stage IB, dead, 2052 days	88.9
TCGA-VS-A9V4-01A	63 years, female, white, stage:Stage IVA, dead, 132 days	88.6
TCGA-Q1-A73R-01A	45 years, female, white, stage:Stage I, alive, 567 days	88.3
TCGA-EA-A3HR-01A	57 years, female, white, stage:Stage II, alive, 940 days	88.1
TCGA-LP-A4AW-01A	52 years, female, asian, stage:Stage IA, alive, 27 days	88.1
TCGA-Q1-A5R1-01A	32 years, female, white, stage:Stage IB, alive, 474 days	87.8
TCGA-EK-A2R8-01A	48 years, female, white, stage:Stage IB, alive, 44 days	86.9
TCGA-C5-A7XC-01A	26 years, female, white, stage:Stage IB, alive, 1551 days	86.6
TCGA-C5-A3HL-01A	76 years, female, white, stage:Stage IB, alive, 621 days	86.1
TCGA-LP-A4AX-01A	45 years, female, asian, stage:Stage IB, alive, 380 days	85.2
TCGA-C5-A1BM-01A	78 years, female, black or african american, stage:Stage IB, dead, 2520 days	85.1
TCGA-HM-A3JJ-01A	40 years, female, black or african american, stage:Stage IB, dead, 659 days	84.5
TCGA-C5-A2LZ-01A	65 years, female, white, stage:Stage IIIB, dead, 3046 days	84.4
TCGA-LP-A5U3-01A	40 years, female, asian, stage:Stage IB, alive, 25 days	84.4
TCGA-FU-A3HZ-01A	64 years, female, white, stage:Stage IIA, alive, 1103 days	84.2
TCGA-C5-A8ZZ-01A	41 years, female, white, stage:Stage IIB, alive, 636 days	84.2
TCGA-VS-A9UC-01A	32 years, female, stage:Stage IIB, alive, 825 days	83.2
TCGA-VS-A9UZ-01A	61 years, female, white, stage:Stage IB, alive, 2044 days	83.0
TCGA-VS-A9V5-01A	50 years, female, white, stage:Stage IIB, dead, 494 days	82.4
TCGA-ZJ-A8QR-01A	38 years, female, native hawaiian or other pacific islander, stage:Stage I, dead, 582 days	82.4
TCGA-UC-A7PI-01A	44 years, female, white, stage:Stage IB, alive, 2114 days	82.2
TCGA-C5-A7CH-01A	43 years, female, white, stage:Stage IIB, alive, 4694 days	81.2
TCGA-VS-A9UM-01A	39 years, female, black or african american, stage:Stage IVB, dead, 829 days	80.8
TCGA-2W-A8YY-01A	51 years, female, white, stage:Stage IB, alive, 533 days	80.7
TCGA-C5-A7UH-01A	55 years, female, white, stage:Stage IIIB, alive, 3988 days	80.5
TCGA-EA-A1QS-01A	46 years, female, white, stage:Stage IB, alive, 1203 days	80.3
TCGA-VS-A8EK-01A	65 years, female, white, stage:Stage IVA, dead, 829 days	80.3
TCGA-IR-A3LF-01A	64 years, female, white, stage:Stage IB, alive, 2949 days	80.0
TCGA-C5-A7X5-01A	72 years, female, black or african american, stage:Stage IVB, dead, 414 days	79.8
TCGA-VS-A9UV-01A	74 years, female, stage:Stage IVA, dead, 104 days	79.6
TCGA-UC-A7PD-01A	21 years, female, american indian or alaska native, stage:Stage IB, dead, 355 days	79.1
TCGA-VS-A959-01A	76 years, female, stage:Stage IIB, alive, 1561 days	79.0
TCGA-MU-A51Y-01A	27 years, female, white, stage:Stage IIA, alive, 854 days	78.7
TCGA-JW-A69B-01A	44 years, female, white, stage:Stage IB, alive, 863 days	78.6
TCGA-EA-A3HT-01A	68 years, female, white, stage:Stage IB, alive, 954 days	78.4
TCGA-VS-A958-01A	46 years, female, white, stage:Stage IIB, alive, 1525 days	78.2
TCGA-EK-A2RL-01A	32 years, female, black or african american, stage:Stage IB, dead, 1453 days	78.1
TCGA-FU-A3NI-01A	45 years, female, white, stage:Stage IB, dead, 638 days	77.8
TCGA-C5-A1M6-01A	55 years, female, white, stage:Stage IIB, dead, 955 days	77.1
TCGA-VS-A8EG-01A	36 years, female, stage:Stage IB, alive, 1386 days	76.7
TCGA-BI-A0VR-01A	53 years, female, white, stage:Stage IIIB, alive, 1505 days	76.0
TCGA-VS-A8QA-01A	44 years, female, stage:Stage IB, alive, 1099 days	75.2
TCGA-VS-A9UJ-01A	55 years, female, stage:Stage IIB, dead, 52 days	74.3
TCGA-C5-A7CJ-01A	42 years, female, white, stage:Stage IIA, dead, 3097 days	74.2
TCGA-DS-A0VL-01A	25 years, female, white, stage:Stage IB, dead, 1692 days	74.2
TCGA-MA-AA3X-01A	50 years, female, black or african american, stage:Stage IIIB, alive, 617 days	74.0
TCGA-C5-A8XH-01A	39 years, female, white, stage:Stage IB, dead, 1394 days	73.8
TCGA-EX-A1H5-01A	58 years, female, black or african american, stage:Stage IIB, alive, 619 days	73.7
TCGA-EK-A2PL-01A	36 years, female, white, stage:Stage IIIB, alive, 13 days	73.1
TCGA-EA-A3HQ-01A	60 years, female, white, stage:Stage II, alive, 1136 days	73.0
TCGA-EK-A2IR-01A	48 years, female, white, stage:Stage IB, alive, 3442 days	72.9
TCGA-FU-A3YQ-01A	35 years, female, white, stage:Stage IB, alive, 861 days	72.5
TCGA-FU-A3TQ-01A	55 years, female, white, stage:Stage IIIB, alive, 795 days	72.3
TCGA-EA-A5FO-01A	59 years, female, white, stage:Stage IB, alive, 815 days	72.3
TCGA-MY-A5BD-01A	62 years, female, white, stage:Stage IIB, alive, 1667 days	72.3
TCGA-Q1-A6DT-01A	55 years, female, white, stage:Stage I, dead, 275 days	72.1
TCGA-Q1-A6DW-01A	44 years, female, white, stage:Stage I, alive, 534 days	71.9
TCGA-C5-A2LY-01A	30 years, female, white, stage:Stage IB, alive, 2383 days	71.8
TCGA-VS-A94Y-01A	47 years, female, white, stage:Stage IIB, dead, 144 days	71.2
TCGA-VS-A9UY-01A	29 years, female, stage:Stage IVB, dead, 555 days	70.9
TCGA-FU-A770-01A	33 years, female, white, stage:Stage IIIB, alive, 34 days	70.5
TCGA-C5-A7CK-01A	58 years, female, white, stage:Stage IVA, dead, 4086 days	70.1
TCGA-VS-A9UP-01A	43 years, female, stage:Stage IIA, alive, 1444 days	69.6
TCGA-VS-A9UI-01A	76 years, female, white, stage:Stage IIB, dead, 1372 days	69.4
TCGA-EK-A2R9-01A	58 years, female, white, stage:Stage IB, alive, 4 days	69.0
TCGA-JW-A5VI-01A	45 years, female, american indian or alaska native, stage:Stage IIB, alive, 747 days	68.7
TCGA-MY-A5BF-01A	68 years, female, white, stage:Stage IIA, alive, 634 days	68.6
TCGA-Q1-A73Q-01A	46 years, female, white, stage:Stage I, alive, 284 days	68.3
TCGA-FU-A3WB-01A	43 years, female, white, stage:Stage IIA, alive, 491 days	68.3
TCGA-DG-A2KL-01A	53 years, female, stage:Stage IIA, alive, 1367 days	68.3
TCGA-XS-A8TJ-01A	41 years, female, black or african american, stage:Stage IB, alive, 890 days	68.2
TCGA-EK-A2RE-01A	26 years, female, white, stage:Stage IIA, alive, 57 days	67.7
TCGA-EK-A2GZ-01A	64 years, female, black or african american, stage:Stage IIIB, alive, 383 days	67.5
TCGA-VS-A8QH-01A	76 years, female, white, stage:Stage IB, dead, 1210 days	67.4
TCGA-Q1-A73P-01A	45 years, female, white, stage:Stage IB, alive, 483 days	67.2
TCGA-VS-A8EB-01A	41 years, female, white, stage:Stage IIIB, dead, 305 days	67.0
TCGA-VS-A954-01A	67 years, female, stage:Stage IIIB, alive, 1714 days	66.6
TCGA-EK-A2R7-01A	45 years, female, white, stage:Stage IB, alive, 27 days	66.5
TCGA-EK-A2RM-01A	40 years, female, white, stage:Stage IB, alive, 50 days	66.0
TCGA-EK-A2RA-01A	74 years, female, stage:Stage IIA, alive, 1246 days	65.9
TCGA-VS-A9UT-01A	72 years, female, asian, stage:Stage IB, alive, 482 days	65.6
TCGA-IR-A3L7-01A	37 years, female, white, stage:Stage IB, alive, 4483 days	65.3
TCGA-WL-A834-01A	57 years, female, white, stage:'--, alive, 791 days	63.6
TCGA-GH-A9DA-01A	27 years, female, white, stage:Stage IB, alive, 540 days	63.5
TCGA-EA-A1QT-01A	47 years, female, white, stage:Stage IB, alive, 1243 days	63.5
TCGA-EK-A3GN-01A	47 years, female, white, stage:Stage IIIB, alive, 27 days	63.3
TCGA-ZJ-AAXA-01A	64 years, female, white, stage:Stage IB, alive, 43 days	62.6
TCGA-IR-A3LK-01A	69 years, female, white, stage:Stage IB, dead, 908 days	62.3
TCGA-FU-A3TX-01A	78 years, female, stage:Stage IB, alive, 45 days	62.2
TCGA-DG-A2KM-01A	46 years, female, stage:Stage IB, alive, 1946 days	62.2
TCGA-C5-A7UC-01A	48 years, female, white, stage:Stage IB, dead, 523 days	62.2
TCGA-VS-A9V3-01A	62 years, female, white, stage:Stage IVB, alive, 540 days	62.1
TCGA-VS-A8QM-01A	47 years, female, stage:Stage IVB, dead, 951 days	62.0
TCGA-ZJ-AAX4-01A	85 years, female, white, stage:Stage II, alive, 21 days	61.7
TCGA-DS-A7WF-01A	41 years, female, stage:Stage IB, dead, 492 days	61.7
TCGA-MU-A8JM-01A	46 years, female, white, stage:Stage IB, alive, 607 days	61.5
TCGA-EX-A69L-01A	41 years, female, asian, stage:Stage IB, alive, 602 days	60.5
TCGA-ZJ-AAXU-01A	51 years, female, white, stage:Stage IIB, alive, 5 days	60.5
TCGA-C5-A8YQ-01A	79 years, female, white, stage:Stage IB, dead, 715 days	60.3
TCGA-EA-A5ZE-01A	54 years, female, asian, stage:Stage IB, alive, 829 days	60.3
TCGA-VS-A9UD-01A	73 years, female, white, stage:Stage IIIA, alive, 739 days	59.9
TCGA-EK-A3GJ-01A	51 years, female, native hawaiian or other pacific islander, stage:Stage IB, alive, 3 days	59.8
TCGA-C5-A1MH-01A	71 years, female, white, stage:Stage IIIB, dead, 1186 days	59.5
TCGA-C5-A901-01A	44 years, female, white, stage:'--, alive, 518 days	59.4
TCGA-DS-A0VN-01A	47 years, female, white, stage:Stage IB, alive, 3609 days	59.2
TCGA-VS-A8QC-01A	51 years, female, white, stage:Stage IVA, dead, 350 days	57.8
TCGA-IR-A3LA-01A	60 years, female, white, stage:Stage IB, alive, 4172 days	57.7
TCGA-DR-A0ZL-01A	53 years, female, asian, stage:Stage IB, alive, 2669 days	57.7
TCGA-VS-A8Q8-01A	26 years, female, white, stage:Stage IB, dead, 978 days	57.4
TCGA-EA-A50E-01A	45 years, female, asian, stage:Stage IVA, dead, 227 days	57.3
TCGA-C5-A907-01A	47 years, female, white, stage:Stage IB, alive, 448 days	57.3
TCGA-JW-A5VL-01A	37 years, female, american indian or alaska native, stage:Stage IB, alive, 474 days	57.2
TCGA-VS-A8EC-01A	55 years, female, white, stage:Stage IIIB, alive, 1415 days	57.2
TCGA-HG-A2PA-01A	38 years, female, white, stage:Stage IB, dead, 773 days	57.0
TCGA-UC-A7PG-01A	44 years, female, white, stage:Stage IIIB, dead, 370 days	56.5
TCGA-LP-A7HU-01A	53 years, female, asian, stage:Stage II, alive, 406 days	56.4
TCGA-Q1-A6DV-01A	36 years, female, asian, stage:Stage IB, alive, 491 days	56.4
TCGA-VS-A953-01A	63 years, female, stage:Stage IVA, dead, 477 days	56.1
TCGA-VS-A9UB-01A	54 years, female, stage:Stage IIB, alive, 911 days	55.8
TCGA-C5-A1ME-01A	40 years, female, white, stage:Stage IB, alive, 1756 days	55.6
TCGA-EK-A2IP-01A	28 years, female, white, stage:Stage IB, alive, 202 days	55.4
TCGA-C5-A7CG-01A	55 years, female, white, stage:Stage IB, alive, 6408 days	54.6
TCGA-DG-A2KH-01A	25 years, female, stage:Stage IB, alive, 34 days	54.5
TCGA-EK-A2H1-01A	20 years, female, white, stage:Stage IB, alive, 799 days	54.4
TCGA-VS-A8QF-01A	42 years, female, white, stage:Stage IIB, alive, 1800 days	54.1
TCGA-EA-A78R-01A	54 years, female, asian, stage:Stage IB, alive, 410 days	53.7
TCGA-4J-AA1J-01A	31 years, female, white, stage:Stage IB, alive, 542 days	53.6
TCGA-IR-A3LB-01A	53 years, female, white, stage:Stage IB, dead, 2032 days	53.2
TCGA-DS-A1OD-01A	49 years, female, white, stage:Stage IB, alive, 3874 days	52.6
TCGA-JX-A3Q0-01A	63 years, female, black or african american, stage:Stage III, alive, 6375 days	52.3
TCGA-DS-A5RQ-01A	80 years, female, white, stage:Stage IB, alive, 512 days	51.9
TCGA-VS-A9U7-01A	30 years, female, white, stage:Stage IB, alive, 1472 days	51.8
TCGA-MU-A5YI-01A	60 years, female, black or african american, stage:Stage IA, alive, 1053 days	51.5
TCGA-VS-A94X-01A	40 years, female, black or african american, stage:Stage IIB, dead, 506 days	51.0
TCGA-C5-A7UE-01A	45 years, female, white, stage:Stage IB, alive, 4738 days	51.0
TCGA-VS-A9UH-01A	53 years, female, black or african american, stage:Stage IVA, alive, 1427 days	50.8
TCGA-C5-A902-01A	35 years, female, black or african american, stage:Stage IB, alive, 149 days	50.6
TCGA-DS-A1OA-01A	77 years, female, asian, stage:Stage IB, dead, 879 days	50.3
TCGA-VS-A94W-01A	39 years, female, white, stage:Stage IIB, alive, 1243 days	50.2
TCGA-DS-A0VK-01A	45 years, female, white, stage:Stage IB, dead, 1118 days	50.2
TCGA-VS-A8EH-01A	56 years, female, stage:Stage IIIB, alive, 986 days	50.0
TCGA-C5-A7X8-01A	35 years, female, white, stage:Stage IB, alive, 83 days	49.7
TCGA-C5-A2LV-01A	36 years, female, black or african american, stage:Stage IB, alive, 2234 days	49.5
TCGA-EA-A43B-01A	43 years, female, white, stage:Stage IB, alive, 791 days	49.1
TCGA-Q1-A73S-01A	33 years, female, white, stage:Stage IB, alive, 688 days	49.0
TCGA-EA-A556-01A	38 years, female, white, stage:Stage IB, alive, 453 days	48.9
TCGA-EA-A3QE-01A	45 years, female, white, stage:Stage IB, alive, 761 days	47.9
TCGA-C5-A1MK-01A	79 years, female, white, stage:Stage IIIB, dead, 74 days	47.7
TCGA-RA-A741-01A	34 years, female, white, stage:Stage IIB, alive, 444 days	47.3
TCGA-VS-A8Q9-01A	79 years, female, white, stage:Stage IB, alive, 1630 days	47.1
TCGA-C5-A7UI-01A	42 years, female, black or african american, stage:Stage IB, dead, 2888 days	46.9
TCGA-JX-A5QV-01A	37 years, female, white, stage:Stage IB, alive, 636 days	46.5
TCGA-BI-A20A-01A	49 years, female, white, stage:Stage IB, alive, 720 days	46.3
TCGA-C5-A2LS-01A	37 years, female, white, stage:Stage IB, alive, 1345 days	46.0
TCGA-R2-A69V-01A	42 years, female, white, stage:Stage IB, alive, 596 days	46.0
TCGA-DR-A0ZM-01A	61 years, female, white, stage:Stage IIIB, alive, 1791 days	45.2
TCGA-ZX-AA5X-01A	64 years, female, white, stage:Stage IIIB, alive, 119 days	45.1
TCGA-C5-A8XI-01A	69 years, female, black or african american, stage:Stage IB, alive, 254 days	44.9
TCGA-MY-A5BE-01A	42 years, female, black or african american, stage:Stage IB, alive, 1066 days	43.0
TCGA-EA-A3QD-01A	59 years, female, white, stage:Stage IIIB, alive, 397 days	42.4
TCGA-FU-A40J-01A	38 years, female, white, stage:Stage IIIB, alive, 426 days	42.0
TCGA-LP-A5U2-01A	30 years, female, asian, stage:Stage IIIB, alive, 9 days	41.8
TCGA-ZJ-A8QQ-01A	24 years, female, white, stage:Stage IIB, alive, 2056 days	41.5
TCGA-FU-A3HY-01A	47 years, female, white, stage:Stage IB, alive, 954 days	41.3
TCGA-EK-A2PG-01A	88 years, female, black or african american, stage:'--, alive, 46 days	40.6
TCGA-MA-AA42-01A	75 years, female, white, stage:Stage IIB, alive, 259 days	39.9
TCGA-EA-A6QX-01A	49 years, female, asian, stage:Stage IIIB, alive, 730 days	36.6
TCGA-JW-A5VJ-01A	56 years, female, american indian or alaska native, stage:Stage IIB, alive, 652 days	36.1
TCGA-VS-A9UU-01A	42 years, female, stage:Stage IIB, alive, 442 days	35.4
TCGA-EA-A4BA-01A	49 years, female, white, stage:Stage IB, alive, 755 days	34.9
TCGA-EK-A2RB-01A	48 years, female, white, stage:Stage IVB, alive, 9 days	34.5
TCGA-MA-AA41-01A	33 years, female, white, stage:Stage IIB, alive, 279 days	34.3
TCGA-DS-A3LQ-01A	46 years, female, stage:Stage IIIB, alive, 699 days	33.7
TCGA-FU-A23K-01A	28 years, female, white, stage:Stage IIIB, alive, 372 days	33.3
TCGA-JX-A3PZ-01A	25 years, female, white, stage:Stage IB, dead, 642 days	32.4
TCGA-VS-A957-01A	64 years, female, white, stage:Stage IB, alive, 1688 days	31.8
TCGA-C5-A2LT-01A	38 years, female, white, stage:Stage IB, alive, 2226 days	31.6
TCGA-C5-A1MQ-01A	35 years, female, white, stage:Stage IIA, alive, 1031 days	31.6
TCGA-EA-A44S-01A	31 years, female, white, stage:Stage IIIB, alive, 369 days	31.5
TCGA-VS-A8EL-01A	38 years, female, black or african american, stage:Stage IIB, alive, 1992 days	31.2
TCGA-HM-A3JK-01A	64 years, female, white, stage:Stage IIA, alive, 632 days	31.1
TCGA-EK-A2RC-01A	33 years, female, stage:Stage IB, alive, 129 days	30.7
TCGA-JW-A5VK-01A	43 years, female, black or african american, stage:Stage IB, alive, 623 days	29.9
TCGA-FU-A3EO-01A	55 years, female, white, stage:Stage IIB, alive, 490 days	29.5
TCGA-Q1-A5R2-01A	64 years, female, white, stage:'--, alive, 499 days	29.2
TCGA-EK-A2RO-01A	59 years, female, american indian or alaska native, stage:Stage IIB, alive, 2 days	29.1
TCGA-DG-A2KK-01A	51 years, female, stage:Stage IIIB, alive, 2496 days	28.8
TCGA-C5-A7CO-01A	68 years, female, white, stage:Stage IB, alive, 4482 days	28.7
TCGA-VS-A8EJ-01A	60 years, female, white, stage:Stage IIB, dead, 607 days	28.5
TCGA-C5-A2LX-01A	54 years, female, white, stage:Stage IB, alive, 2526 days	26.9
TCGA-IR-A3LI-01A	48 years, female, white, stage:Stage IVB, alive, 2493 days	25.7
TCGA-UC-A7PF-01A	44 years, female, stage:Stage IB, dead, 2859 days	25.1
TCGA-IR-A3LL-01A	60 years, female, white, stage:Stage IB, alive, 1106 days	24.9
TCGA-C5-A7X3-01A	70 years, female, white, stage:Stage IIIB, dead, 284 days	24.9
TCGA-DS-A0VM-01A	51 years, female, white, stage:Stage IB, alive, 3589 days	24.7
TCGA-EA-A3Y4-01A	40 years, female, white, stage:Stage IB, alive, 1122 days	24.6
TCGA-C5-A1M8-01A	43 years, female, white, stage:Stage IB, alive, 919 days	24.3
TCGA-EA-A5O9-01A	39 years, female, white, stage:Stage IB, alive, 788 days	21.4
TCGA-JW-A852-01A	42 years, female, white, stage:Stage IIB, dead, 252 days	20.9
TCGA-EK-A2PI-01A	44 years, female, white, stage:Stage IIIB, alive, 586 days	20.5
TCGA-DG-A2KJ-01A	50 years, female, stage:Stage IIIB, alive, 2893 days	19.3
TCGA-C5-A1MF-01A	49 years, female, white, stage:Stage IB, alive, 1617 days	15.7
TCGA-EK-A2RN-01A	45 years, female, white, stage:Stage IB, alive, 71 days	15.6
TCGA-Q1-A5R3-01A	56 years, female, white, stage:'--, alive, 485 days	15.1
TCGA-DS-A7WI-01A	43 years, female, white, stage:Stage IIA, dead, 252 days	13.7
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CERVICAL CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample. Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes. Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based) Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts	Antibody HPA011276		Antibody HPA017062
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Squamous cell carcinoma, NOS
Adenocarcinoma, NOS

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

contact@proteinatlas.org