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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TBCC is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
24.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
21.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
21.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
20.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
17.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
16.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
16.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
14.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
12.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
12.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
11.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
11.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
10.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
10.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
10.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
9.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
9.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
9.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
9.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
9.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
9.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
9.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
8.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
8.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
8.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
8.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
8.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
8.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
8.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
8.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
8.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
8.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
8.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
7.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
7.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
7.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
7.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
7.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
7.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
7.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
7.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
7.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
7.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
6.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
6.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
6.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
6.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
6.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
6.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
6.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
6.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
6.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
6.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
6.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
6.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
5.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
5.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
5.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
5.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
4.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
4.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
4.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
3.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TBCC is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
71.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
46.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
33.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
28.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
28.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
26.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
26.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
26.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
26.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
25.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
24.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
24.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
23.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
23.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
23.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
23.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
22.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
22.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
22.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
22.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
22.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
22.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
21.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
21.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
21.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
21.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
21.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
21.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
21.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
21.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
21.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
21.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
21.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
21.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
21.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
21.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
21.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
21.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
21.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
21.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
21.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
21.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
21.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
20.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
20.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
20.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
20.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
20.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
20.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
20.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
20.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
20.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
20.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
20.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
20.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
20.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
20.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
20.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
20.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
20.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
20.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
20.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
19.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
19.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
19.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
19.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
19.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
19.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
19.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
19.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
19.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
19.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
19.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
19.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
19.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
19.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
19.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
19.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
19.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
19.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
19.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
19.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
19.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
19.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
19.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
18.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
18.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
18.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
18.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
18.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
18.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
18.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
18.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
18.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
18.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
18.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
18.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
18.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
18.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
18.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
18.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
18.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
17.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
17.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
17.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
17.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
17.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
17.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
17.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
17.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
17.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
17.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
17.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
17.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
17.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
17.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
17.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
17.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
17.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
17.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
17.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
17.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
17.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
16.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
16.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
16.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
16.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
16.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
16.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
16.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
16.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
16.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
16.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
16.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
16.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
16.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
16.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
16.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
16.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
16.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
16.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
16.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
16.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
16.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
16.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
16.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
16.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
16.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
16.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
16.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
16.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
16.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
16.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
16.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
16.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
16.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
16.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
16.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
15.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
15.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
15.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
15.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
15.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
15.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
15.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
15.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
15.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
15.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
15.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
15.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
15.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
15.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
15.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
15.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
15.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
15.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
15.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
15.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
15.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
15.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
15.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
15.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
15.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
15.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
15.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
15.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
15.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
15.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
15.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
15.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
15.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
15.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
15.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
15.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
15.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
15.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
15.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
14.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
14.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
14.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
14.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
14.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
14.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
14.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
14.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
14.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
14.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
14.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
14.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
14.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
14.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
14.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
14.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
14.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
14.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
14.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
14.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
14.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
14.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
14.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
14.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
14.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
14.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
14.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
14.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
14.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
14.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
14.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
14.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
14.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
14.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
14.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
14.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
14.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
14.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
14.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
14.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
14.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
14.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
14.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
14.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
14.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
14.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
14.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
14.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
14.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
13.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
13.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
13.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
13.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
13.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
13.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
13.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
13.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
13.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
13.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
13.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
13.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
13.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
13.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
13.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
13.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
13.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
13.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
13.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
13.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
13.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
13.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
13.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
13.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
13.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
13.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
13.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
13.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
13.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
13.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
13.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
13.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
13.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
13.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
13.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
13.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
13.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
13.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
13.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
13.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
13.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
13.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
13.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
13.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
13.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
13.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
13.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
13.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
13.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
13.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
13.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
13.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
12.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
12.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
12.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
12.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
12.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
12.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
12.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
12.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
12.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
12.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
12.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
12.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
12.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
12.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
12.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
12.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
12.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
12.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
12.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
12.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
12.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
12.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
12.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
12.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
12.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
12.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
12.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
12.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
12.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
12.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
12.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
12.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
12.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
12.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
12.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
12.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
12.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
12.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
12.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
12.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
12.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
12.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
12.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
12.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
12.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
12.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
12.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
12.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
12.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
11.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
11.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
11.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
11.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
11.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
11.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
11.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
11.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
11.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
11.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
11.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
11.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
11.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
11.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
11.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
11.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
11.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
11.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
11.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
11.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
11.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
11.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
11.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
11.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
11.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
11.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
11.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
11.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
11.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
11.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
11.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
11.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
11.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
11.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
11.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
11.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
11.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
11.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
10.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
10.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
10.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
10.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
10.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
10.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
10.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
10.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
10.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
10.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
10.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
10.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
10.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
10.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
10.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
10.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
10.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
10.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
10.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
10.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
10.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
10.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
10.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
10.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
10.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
9.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
9.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
9.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
9.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
9.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
9.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
9.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
9.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
9.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
9.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
9.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
9.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
9.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
9.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
9.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
9.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
9.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
9.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
9.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
9.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
9.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
9.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
9.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
9.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
9.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
9.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
9.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
9.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
9.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
9.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
9.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
9.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
9.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
9.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
9.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
9.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
9.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
8.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
8.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
8.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
8.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
8.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
8.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
8.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
8.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
8.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
8.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
8.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
8.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
8.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
8.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
8.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
8.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
8.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
8.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
8.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
8.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
8.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
8.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
8.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
8.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
7.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
7.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
7.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
7.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
7.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
7.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
7.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
7.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
7.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
7.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
7.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
7.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
7.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
7.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
6.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
6.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
6.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
6.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
6.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
6.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
6.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
6.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
6.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
6.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
6.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
6.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
6.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
6.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
6.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
6.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
5.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
5.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
5.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
5.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
5.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
5.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
5.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
5.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
5.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
4.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
4.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
4.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
3.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
3.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
3.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TBCC is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
27.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
26.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
25.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
24.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
23.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
22.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
22.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
22.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
22.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
22.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
22.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
21.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
21.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
21.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
21.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
21.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
20.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
20.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
19.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
19.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
19.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
19.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
19.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
19.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
19.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
19.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
19.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
19.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
18.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
18.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
18.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
17.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
17.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
17.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
17.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
17.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
17.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
17.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
16.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
16.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
16.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
16.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
16.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
16.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
15.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
15.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
15.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
15.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
15.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
15.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
15.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
15.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
15.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
15.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
15.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
15.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
15.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
15.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
14.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
14.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
14.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
14.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
14.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
14.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
14.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
14.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
14.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
14.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
14.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
13.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
13.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
13.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
13.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
13.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
13.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
13.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
13.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
13.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
13.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
12.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
12.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
12.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
12.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
11.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
11.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
11.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
10.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
10.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
10.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
9.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
9.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
9.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
8.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
8.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
7.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
7.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
6.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
6.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
5.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TBCC is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
121.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
85.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
44.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
43.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
37.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
34.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
33.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
32.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
32.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
31.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
31.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
29.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
28.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
27.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
27.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
26.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
26.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
25.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
25.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
25.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
25.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
24.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
24.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
24.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
24.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
24.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
23.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
23.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
23.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
22.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
22.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
22.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
22.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
22.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
21.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
21.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
21.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
21.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
21.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
21.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
20.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
20.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
20.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
20.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
20.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
20.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
19.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
19.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
19.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
19.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
19.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
19.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
19.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
19.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
19.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
19.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
19.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
19.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
19.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
19.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
18.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
18.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
18.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
18.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
18.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
18.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
18.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
18.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
18.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
18.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
18.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
18.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
18.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
18.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
18.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
18.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
17.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
17.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
17.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
17.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
17.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
17.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
17.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
17.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
17.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
17.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
16.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
16.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
16.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
16.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
16.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
16.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
16.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
16.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
16.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
16.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
16.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
15.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
15.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
15.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
15.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
15.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
15.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
15.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
15.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
15.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
15.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
15.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
15.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
15.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
15.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
15.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
15.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
14.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
14.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
14.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
14.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
14.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
14.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
14.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
14.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
14.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
14.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
14.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
14.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
14.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
14.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
14.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
13.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
13.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
13.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
13.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
13.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
13.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
13.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
13.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
13.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
13.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
13.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
13.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
13.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
13.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
13.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
13.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
13.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
13.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
13.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
13.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
13.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
13.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
13.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
12.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
12.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
12.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
12.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
12.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
12.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
12.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
12.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
12.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
12.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
12.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
12.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
12.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
12.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
12.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
12.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
12.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
12.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
12.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
12.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
12.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
12.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
12.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
12.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
11.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
11.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
11.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
11.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
11.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
11.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
11.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
11.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
11.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
11.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
11.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
11.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
11.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
11.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
11.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
11.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
11.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
11.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
10.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
10.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
10.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
10.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
10.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
10.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
10.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
10.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
10.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
10.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
10.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
10.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
10.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
10.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
10.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
10.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
10.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
10.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
10.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
10.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
10.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
9.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
9.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
9.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
9.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
9.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
9.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
9.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
9.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
9.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
9.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
9.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
9.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
8.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
8.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
8.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
8.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
8.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
8.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
8.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
8.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
8.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
8.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
8.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
8.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
8.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
8.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
8.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
8.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
7.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
7.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
7.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
7.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
7.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
7.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
7.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
7.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
7.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
7.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
7.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
7.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
6.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
6.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
6.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
6.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
6.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
6.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
5.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
5.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
5.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
5.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
5.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
5.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
5.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
5.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
4.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
4.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
4.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
4.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
4.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
2.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
2.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
2.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
2.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
2.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
1.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0009000003
Tumor
0.6
CPT0011240003
Tumor
0.6
CPT0077110003
Tumor
0.6
CPT0026410003
Tumor
0.5
CPT0001340003
Tumor
0.5
CPT0010160003
Tumor
0.5
CPT0000640003
Tumor
0.5
CPT0012370003
Tumor
0.5
CPT0001540009
Tumor
0.5
CPT0071150004
Tumor
0.4
CPT0065870003
Tumor
0.4
CPT0000780007
Tumor
0.4
CPT0009060003
Tumor
0.4
CPT0001500009
Tumor
0.4
CPT0006630003
Tumor
0.4
CPT0078830003
Tumor
0.4
CPT0002270011
Tumor
0.4
CPT0065930003
Tumor
0.4
CPT0077490003
Tumor
0.3
CPT0088760003
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0017410003
Tumor
0.3
CPT0085670003
Tumor
0.3
CPT0012080003
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0025050003
Tumor
0.3
CPT0025580004
Tumor
0.3
CPT0015910003
Tumor
0.3
CPT0006900003
Tumor
0.3
CPT0088900003
Tumor
0.3
CPT0079480003
Tumor
0.3
CPT0025110003
Tumor
0.3
CPT0088970003
Tumor
0.2
CPT0021240003
Tumor
0.2
CPT0012550003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0019990003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0063320003
Tumor
0.2
CPT0078990003
Tumor
0.2
CPT0086870003
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0092790003
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0001220008
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0079180003
Tumor
0.2
CPT0001270001
Normal
0.1
CPT0089020003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0088550004
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0019130003
Tumor
0.1
CPT0024680001
Normal
0.1
CPT0092730003
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0078530001
Normal
0.1
CPT0023690003
Tumor
0.1
CPT0010110003
Tumor
0.1
CPT0023360001
Normal
0.1
CPT0089460004
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0079380003
Tumor
0.1
CPT0015730003
Tumor
0.1
CPT0076330003
Tumor
0.1
CPT0010120001
Normal
0.1
CPT0086950003
Tumor
0.1
CPT0010170001
Normal
0.1
CPT0086030003
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0087050003
Normal
0.1
CPT0007860003
Tumor
0.1
CPT0084560003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0012640003
Normal
0.1
CPT0092290003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0086820003
Tumor
0.0
CPT0012090003
Normal
0.0
CPT0023710001
Normal
0.0
CPT0076350001
Normal
0.0
CPT0084590001
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0081880003
Tumor
0.0
CPT0079300001
Normal
0.0
CPT0081600003
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0009080003
Normal
0.0
CPT0077320001
Normal
0.0
CPT0017850003
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0014370004
Tumor
0.0
CPT0092740003
Normal
0.0
CPT0078670001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0089480003
Normal
0.0
CPT0009020003
Normal
0.0
CPT0001230001
Normal
0.0
CPT0065430003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0069010001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0020130001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0007870001
Normal
0.0
CPT0088920001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0014470001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0006730001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0012570003
Normal
0.0
CPT0081620001
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0088480003
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0069000003
Tumor
-0.1
CPT0025290003
Tumor
-0.1
CPT0077500001
Normal
-0.1
CPT0077310003
Tumor
-0.1
CPT0012920003
Normal
-0.1
CPT0063630003
Tumor
-0.1
CPT0000890001
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0065450001
Normal
-0.1
CPT0025060001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0078800003
Tumor
-0.1
CPT0088630003
Tumor
-0.1
CPT0086970003
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0078510003
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0066470004
Tumor
-0.1
CPT0001550001
Normal
-0.1
CPT0012280003
Tumor
-0.1
CPT0064370003
Tumor
-0.1
CPT0001180009
Tumor
-0.1
CPT0001510001
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0069160003
Tumor
-0.1
CPT0086370003
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0007320003
Tumor
-0.1
CPT0065690003
Tumor
-0.1
CPT0092310003
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0012180003
Tumor
-0.1
CPT0088780001
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0026420001
Normal
-0.2
CPT0078660003
Tumor
-0.2
CPT0020120003
Tumor
-0.2
CPT0064400001
Normal
-0.2
CPT0014450004
Tumor
-0.2
CPT0013790003
Normal
-0.2
CPT0012670003
Tumor
-0.2
CPT0065750003
Tumor
-0.3
CPT0002350011
Tumor
-0.3
CPT0023350003
Tumor
-0.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
