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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS10 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
3149.8
Number of samples
349
Samples
Sample
Description
TPM
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
12059.9
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
10334.7
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
9352.6
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
9214.6
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
7353.1
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
7178.4
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
6816.0
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
6740.2
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
6740.2
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
6632.6
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
6561.8
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
6437.6
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
6355.5
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
6320.5
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
6215.5
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
6160.8
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
6143.2
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
6020.6
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
5942.6
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
5939.0
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
5887.6
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
5816.2
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
5799.0
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
5775.9
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
5701.8
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
5650.8
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
5565.7
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
5564.1
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
5551.7
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
5474.0
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
5413.7
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
5293.6
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
5271.7
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
5269.7
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
5255.4
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
5236.0
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
5223.0
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
5219.7
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
5142.2
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
5087.0
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
5037.9
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
5035.5
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
4974.8
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
4959.4
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
4929.8
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
4910.0
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
4904.5
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
4898.7
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
4882.5
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
4844.9
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
4837.3
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
4805.9
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
4793.3
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
4777.2
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
4757.0
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
4753.6
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
4729.9
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
4712.9
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
4662.6
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
4643.9
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
4573.1
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
4572.7
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
4570.8
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
4473.8
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
4439.7
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
4423.8
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
4381.9
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
4378.6
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
4367.5
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
4309.2
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
4286.7
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
4262.6
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
4251.3
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
4213.9
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
4198.5
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
4194.2
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
4191.6
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
4124.5
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
4119.7
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
4030.5
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
4025.1
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
3976.1
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
3952.8
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
3941.5
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
3938.4
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
3935.3
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
3923.7
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
3910.7
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
3909.5
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
3905.2
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
3876.0
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
3865.9
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
3854.9
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
3832.5
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
3817.8
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
3806.2
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
3755.5
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
3749.8
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
3748.7
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
3716.0
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
3684.9
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
3668.7
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
3667.8
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
3653.3
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
3641.4
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
3615.4
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
3609.4
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
3604.8
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
3562.2
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
3533.6
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
3531.0
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
3524.0
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
3521.8
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
3514.4
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
3508.5
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
3506.3
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
3504.8
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
3490.5
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
3464.8
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
3454.5
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
3442.5
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
3440.3
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
3364.8
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
3356.1
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
3349.3
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
3339.9
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
3308.1
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
3304.7
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
3303.0
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
3286.3
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
3276.4
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
3269.6
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
3236.0
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
3234.2
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
3225.9
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
3224.4
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
3222.0
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
3207.8
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
3195.9
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
3190.5
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
3154.7
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
3149.4
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
3148.5
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
3148.4
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
3140.2
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
3122.9
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
3121.0
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
3109.2
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
3105.7
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
3097.6
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
3086.6
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
3081.8
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
3074.2
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
3073.8
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
3059.1
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
3045.7
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
3025.8
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
3009.9
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
2983.3
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
2977.9
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
2958.8
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
2946.4
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
2945.0
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
2942.2
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
2932.8
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
2929.0
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
2927.2
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
2918.1
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
2917.1
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
2889.1
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
2875.1
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
2869.0
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
2834.4
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
2820.6
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
2815.5
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
2806.7
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
2791.7
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
2790.2
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
2782.2
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
2735.8
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
2730.7
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
2730.3
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
2730.1
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
2728.7
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
2722.3
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
2721.5
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
2718.8
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
2701.2
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
2694.3
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
2678.7
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
2676.7
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
2660.3
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
2652.1
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
2640.4
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
2637.2
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
2623.2
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
2617.6
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
2614.9
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
2614.0
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
2609.1
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
2603.2
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
2588.7
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
2582.7
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
2564.7
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
2549.1
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
2547.1
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
2539.8
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
2539.6
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
2514.9
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
2511.1
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
2505.7
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
2479.6
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
2457.7
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
2454.3
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
2447.6
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
2442.8
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
2439.8
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
2435.6
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
2404.2
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
2400.3
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
2398.8
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
2392.6
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
2379.4
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
2376.9
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
2363.4
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
2362.0
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
2359.6
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
2353.2
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
2343.8
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
2337.5
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
2325.7
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
2324.3
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
2315.9
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
2292.2
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
2286.3
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
2285.6
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
2266.5
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
2262.8
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
2260.7
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
2254.3
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
2233.2
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
2203.2
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
2202.4
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
2199.9
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
2184.4
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
2170.2
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
2167.1
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
2131.9
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
2121.9
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
2119.1
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
2118.0
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
2114.6
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
2096.4
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
2095.5
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
2091.9
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
2074.6
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
2067.5
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
2063.7
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
2046.7
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
2030.2
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
1998.9
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
1974.6
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
1972.8
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
1958.0
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
1925.5
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
1921.4
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
1902.0
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
1892.6
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
1888.2
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
1887.4
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
1885.6
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
1881.9
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
1877.2
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
1873.8
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
1859.8
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
1855.6
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
1852.3
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
1839.8
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
1812.9
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
1807.5
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
1799.3
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
1789.0
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
1786.1
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
1768.7
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
1759.6
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
1753.8
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
1753.3
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
1724.2
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
1711.5
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
1705.3
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
1704.9
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
1704.2
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
1701.6
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
1674.7
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
1661.0
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
1650.6
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
1646.5
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
1637.8
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
1632.3
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
1615.6
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
1612.8
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
1609.8
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
1593.6
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
1590.0
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
1581.9
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
1581.2
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
1576.9
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
1572.3
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
1541.2
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
1539.1
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
1504.4
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
1496.9
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
1490.7
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
1478.2
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
1457.3
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
1442.8
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
1433.7
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
1414.9
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
1411.6
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
1403.0
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
1381.1
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
1377.9
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
1372.9
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
1372.5
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
1368.8
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
1353.8
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
1341.7
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
1326.2
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
1317.8
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
1293.1
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
1289.4
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
1265.1
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
1261.5
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
1239.9
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
1220.6
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
1191.6
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
1096.6
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
1074.9
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
1072.0
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
1067.2
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
1066.5
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
1066.0
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
1048.3
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
984.0
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
897.1
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
889.0
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
878.9
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
835.7
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS10 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
2482.8
Number of samples
81
Samples
Sample
Description
TPM
DO46390
0 years, female, NA, stage:III, dead, 374 days
7281.4
DO46576
0 years, female, NA, stage:III, alive, 133 days
6472.8
DO46366
0 years, female, NA, stage:III, dead, 2054 days
5594.1
DO46333
0 years, female, NA, stage:III, dead, 359 days
5244.6
DO46356
0 years, female, NA, stage:III, dead, 911 days
5005.9
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
4935.2
DO46453
0 years, female, NA, stage:III, dead, 3294 days
4789.1
DO46611
0 years, female, NA, stage:III, dead, 734 days
4455.1
DO46352
0 years, female, NA, stage:III, dead, 677 days
4377.1
DO46581
0 years, female, NA, stage:III, dead, 408 days
4311.1
DO46402
0 years, female, NA, stage:III, dead, 511 days
4028.4
DO46364
0 years, female, NA, stage:III, dead, 806 days
3895.3
DO46380
0 years, female, NA, stage:III, dead, 1423 days
3861.1
DO46493
0 years, female, NA, stage:IV, alive, 839 days
3553.3
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
3512.8
DO46342
0 years, female, NA, stage:III, dead, 1398 days
3424.7
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
3370.8
DO46338
0 years, female, NA, stage:III, dead, 596 days
3080.9
DO46392
0 years, female, NA, stage:III, dead, 628 days
3039.1
DO46328
0 years, female, NA, stage:III, dead, 972 days
3020.0
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
2922.4
DO46362
0 years, female, NA, stage:III, dead, 1639 days
2830.9
DO46372
0 years, female, NA, stage:III, dead, 1326 days
2759.7
DO46400
0 years, female, NA, stage:III, dead, 719 days
2748.1
DO46468
0 years, female, NA, stage:III, alive, 2776 days
2705.2
DO46443
0 years, female, NA, stage:III, dead, 2464 days
2650.5
DO46370
0 years, female, NA, stage:III, dead, 1727 days
2568.8
DO46404
0 years, female, NA, stage:III, dead, 690 days
2557.2
DO46350
0 years, female, NA, stage:III, dead, 886 days
2527.5
DO46384
0 years, female, NA, stage:III, dead, 614 days
2519.2
DO46571
0 years, female, NA, stage:III, dead, 243 days
2456.4
DO46518
0 years, female, NA, stage:III, alive, 2960 days
2375.5
DO46388
0 years, female, NA, stage:III, dead, 413 days
2349.8
DO46334
0 years, female, NA, stage:III, dead, 496 days
2331.3
DO46325
0 years, female, NA, stage:III, dead, 477 days
2326.5
DO46586
0 years, female, NA, stage:III, dead, 1019 days
2306.0
DO46331
0 years, female, NA, stage:III, dead, 612 days
2303.9
DO46368
0 years, female, NA, stage:III, dead, 2879 days
2283.4
DO46463
0 years, female, NA, stage:III, dead, 2451 days
2237.7
DO46336
0 years, female, NA, stage:IV, dead, 664 days
2212.4
DO46591
0 years, female, NA, stage:III, dead, 195 days
2125.6
DO46396
0 years, female, NA, stage:III, dead, 583 days
2091.9
DO46344
0 years, female, NA, stage:III, dead, 642 days
2089.8
DO46330
0 years, female, NA, stage:III, dead, 684 days
2088.4
DO46588
0 years, female, NA, stage:III, dead, 438 days
2068.0
DO46566
0 years, female, NA, stage:III, dead, 673 days
2034.5
DO46378
0 years, female, NA, stage:III, alive, 843 days
2016.8
DO46560
0 years, female, NA, stage:IV, dead, 286 days
2014.7
DO46412
0 years, female, NA, stage:III, dead, 597 days
2012.1
DO46508
0 years, female, NA, stage:III, dead, 2101 days
1977.1
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
1937.8
DO46326
0 years, female, NA, stage:III, dead, 701 days
1893.1
DO46346
0 years, female, NA, stage:III, dead, 1187 days
1871.2
DO46398
0 years, female, NA, stage:III, alive, 437 days
1844.4
DO46374
0 years, female, NA, stage:III, dead, 1409 days
1838.7
DO46432
0 years, female, NA, stage:III, alive, 2218 days
1833.0
DO46408
0 years, female, NA, stage:III, dead, 489 days
1816.4
DO46602
0 years, female, NA, stage:III, dead, 205 days
1670.0
DO46436
0 years, female, NA, stage:III, alive, 3193 days
1664.6
DO46538
0 years, female, NA, stage:III, dead, 1527 days
1636.5
DO46568
0 years, female, NA, stage:III, dead, 320 days
1597.7
DO46329
0 years, female, NA, stage:III, dead, 1699 days
1593.0
DO46358
0 years, female, NA, stage:III, dead, 423 days
1508.4
DO46597
0 years, female, NA, stage:III, dead, 393 days
1420.1
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
1386.2
DO46386
0 years, female, NA, stage:III, dead, 1162 days
1313.8
DO46528
0 years, female, NA, stage:III, alive, 6139 days
1296.0
DO46606
0 years, female, NA, stage:III, alive, 804 days
1295.6
DO46561
0 years, female, NA, stage:III, dead, 195 days
1269.6
DO46332
0 years, female, NA, stage:III, dead, 689 days
1253.4
DO46340
0 years, female, NA, stage:III, dead, 616 days
1196.2
DO46546
0 years, female, NA, stage:III, dead, 1889 days
1192.0
DO46376
0 years, female, NA, stage:III, dead, 1430 days
1141.4
DO46354
0 years, female, NA, stage:III, dead, 843 days
1110.2
DO46348
0 years, female, NA, stage:IV, dead, 287 days
1104.6
DO46448
0 years, female, NA, stage:III, dead, 654 days
1100.4
DO46382
0 years, female, NA, stage:IV, dead, 311 days
1037.9
DO46551
0 years, female, NA, stage:III, dead, 1055 days
1004.9
DO46533
0 years, female, NA, stage:III, alive, 3667 days
954.1
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
806.8
DO46327
0 years, female, NA, stage:III, dead, 184 days
775.4
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
0.8
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
0.8
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
0.7
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
0.7
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
0.7
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
0.7
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
0.7
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
0.7
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
0.7
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
0.7
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
0.6
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
0.6
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
0.6
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
0.6
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
0.6
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
0.6
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
0.6
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
0.6
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
0.6
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
0.6
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
0.5
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
0.5
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
0.5
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
0.5
1a10c200-3895-4648-b951-94f99f_D2
Tumor
0.5
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
0.5
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
0.5
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
0.5
e9d416e7-f661-400a-896e-388545_D2
Tumor
0.5
161317f3-1a39-438e-af45-cd2502_D2
Tumor
0.5
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
0.4
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
0.4
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
0.4
1772e913-f62e-446a-8cf3-720348_D2
Tumor
0.4
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
0.4
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
0.4
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
0.4
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
0.4
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
0.4
15524912-685a-47ce-a824-567848_D2
Tumor
0.4
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
0.4
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
0.4
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
0.4
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
0.4
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
0.4
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
0.4
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
0.4
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
0.4
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
0.4
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
0.3
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
0.3
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
0.3
340a3769-3031-41ae-bb08-a2f696_D2
Normal
0.3
10c2d629-0287-4511-ac25-f29031_D2
Tumor
0.3
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
0.3
285fed94-1495-448e-879b-b55de9_D2
Tumor
0.3
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
0.3
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
0.3
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
0.3
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
0.2
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
0.2
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
0.2
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
0.2
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
0.2
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
0.2
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
0.2
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
0.2
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
0.2
a3a26070-fb84-406a-8280-d555e6_D2
Normal
0.2
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
0.2
21efd60f-6a31-4b98-9477-16a905_D2
Normal
0.2
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
0.2
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
0.2
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
0.2
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
0.1
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
0.1
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
0.1
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
0.1
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
0.0
2f901c90-617e-46da-9fac-d68369_D2
Tumor
0.0
a65d8e76-640f-4341-a561-afbb57_D2
Normal
0.0
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
0.0
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
0.0
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
0.0
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
0.0
1db5574d-aca7-403c-8100-6e705f_D2
Normal
0.0
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
0.0
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
-0.1
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
-0.1
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
-0.1
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
-0.1
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
-0.1
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
-0.1
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
-0.1
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
-0.2
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
-0.2
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
-0.2
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
-0.2
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
-0.2
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
-0.2
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
-0.2
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
-0.3
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
-0.3
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
-0.3
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
-0.5
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
-0.7
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
-0.7
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
-0.7
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
