HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:24.4 nTPM
HPA Brain:68.9 nTPM
GTEx:24.4 nTPM
FANTOM5:196.2 Scaled Tags Per Million
Pig:54.5 nTPM
Mouse:36.6 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049892Antibody CAB020839
Glial cells LowNot detected
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 68.9
Sample id Sample description nTPM
Hippocampus
nTPM: 65.7
2529 Female, age 94, left hemisphere 71.8
2621 Female, age 67, right hemisphere 66.7
1898 Male, age 80, left hemisphere 66.0
2148 Female, age 91, left hemisphere 65.4
1911 Female, age 85, right hemisphere 62.7
1855 Male, age 76, left hemisphere 61.6
Dentate gyrus
nTPM: 62.0
2530 Female, age 94, left hemisphere 68.3
2246 Female, age 85, both hemispheres 66.8
2010 Male, age 76, both hemispheres 62.5
2531 Female, age 67, both hemispheres 62.5
2528 Male, age 74, both hemispheres 57.6
1927 Female, age 91, both hemispheres 54.4
Entorhinal gyrus
nTPM: 65.7
2117 Female, age 91, right hemisphere 70.0
1938 Female, age 85, left hemisphere 68.1
1787 Male, age 76, left hemisphere 66.0
2686 Male, age 75, right hemisphere 65.1
2764 Male, age 80, right hemisphere 64.6
2613 Female, age 94, left hemisphere 60.5
Hippocampus, CA1
nTPM: 62.7
1873 Female, age 85, both hemispheres 67.6
2527 Male, age 74, both hemispheres 66.4
2045 Male, age 76, both hemispheres 64.2
2749 Male, age 80, left hemisphere 60.2
2082 Female, age 91, right hemisphere 55.0
Hippocampus, CA2
nTPM: 62.0
1940 Female, age 85, left hemisphere 68.0
2249 Male, age 74, both hemispheres 63.9
2113 Female, age 91, right hemisphere 63.3
1892 Male, age 76, both hemispheres 60.3
1963 Male, age 80, left hemisphere 60.1
2437 Female, age 94, left hemisphere 56.7
Hippocampus, CA3
nTPM: 61.6
1891 Female, age 85, both hemispheres 63.3
2436 Male, age 74, both hemispheres 63.0
2620 Female, age 94, left hemisphere 62.2
2861 Female, age 67, both hemispheres 60.6
1867 Male, age 76, both hemispheres 60.4
2137 Male, age 80, left hemisphere 60.0
Parahippocampal cortex
nTPM: 67.0
2532 Female, age 72, left hemisphere 76.0
1850 Male, age 80, both hemispheres 73.9
2245 Female, age 91, both hemispheres 72.1
2250 Female, age 67, right hemisphere 67.8
1933 Female, age 85, both hemispheres 66.7
2018 Male, age 76, both hemispheres 65.7
2622 Female, age 67, right hemisphere 63.9
2692 Male, age 74, both hemispheres 62.9
2693 Female, age 94, both hemispheres 60.8
1990 Female, age 91, right hemisphere 59.9
Perirhinal gyrus
nTPM: 68.9
1794 Male, age 80, right hemisphere 74.1
1841 Female, age 85, right hemisphere 73.3
2521 Female, age 94, right hemisphere 68.0
2848 Male, age 76, right hemisphere 66.6
1847 Female, age 91, left hemisphere 62.3
Subiculum
nTPM: 62.8
2619 Male, age 74, both hemispheres 65.8
2042 Male, age 76, both hemispheres 65.3
1977 Female, age 85, both hemispheres 64.0
2438 Female, age 94, left hemisphere 62.6
1901 Male, age 80, both hemispheres 60.2
2729 Female, age 91, right hemisphere 58.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 24.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.4
Samples: 197

Max nTPM: 39.7
Min nTPM: 8.1
Std nTPM: 6.7
Median nTPM: 24.3
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 39.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 38.7
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 38.0
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 37.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 37.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 37.6
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 37.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 37.0
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 36.8
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 36.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 36.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 196.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 196.2
FF:10169-103B7 60 years, female 222.2
FF:10153-102I9 76 years, female 170.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 54.5
Pig sample Sample description nTPM
Subiculum
nTPM: 48.6
Samples: 4

Max nTPM: 55.9
Min nTPM: 45.5
Sample A Female 55.9
Sample B Female 46.1
Sample C Male 45.5
Sample D Male 46.9
Dorsal hippocampus
nTPM: 54.5
Samples: 4

Max nTPM: 62.3
Min nTPM: 46.5
Sample A Female 62.3
Sample B Female 51.6
Sample C Male 57.4
Sample D Male 46.5
Entorhinal cortex
nTPM: 51.7
Samples: 4

Max nTPM: 58.0
Min nTPM: 48.0
Sample A Female 48.7
Sample B Female 58.0
Sample C Male 52.1
Sample D Male 48.0
Ventral hippocampus
nTPM: 47.9
Samples: 4

Max nTPM: 53.0
Min nTPM: 41.4
Sample A Female 45.1
Sample B Female 41.4
Sample C Male 51.9
Sample D Male 53.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 36.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 35.9
Samples: 4

Max nTPM: 37.3
Min nTPM: 34.5
Sample A Male 34.5
Sample B Male 37.3
Sample C Female 34.7
Sample D Female 36.9
Hippocampal formation
nTPM: 36.6
Samples: 4

Max nTPM: 38.9
Min nTPM: 34.3
Sample A Male 35.3
Sample B Male 37.7
Sample C Female 38.9
Sample D Female 34.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
68301258 Antisense, RP_041129_02_H09, Mouse strain C57BL/6J (56 days, male) 0.7

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