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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SDC4 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
508.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
1286.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
1223.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
1088.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
971.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
939.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
930.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
891.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
882.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
877.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
805.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
770.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
746.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
731.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
691.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
678.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
662.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
652.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
613.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
603.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
601.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
563.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
545.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
544.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
524.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
517.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
509.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
504.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
503.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
494.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
487.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
480.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
465.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
442.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
420.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
408.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
405.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
391.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
386.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
383.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
380.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
358.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
357.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
354.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
354.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
346.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
332.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
329.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
328.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
326.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
323.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
310.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
287.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
273.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
267.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
238.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
231.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
221.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
220.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
216.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
213.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
179.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
161.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
152.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SDC4 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
154.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
739.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
680.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
629.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
582.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
481.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
457.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
440.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
439.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
438.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
436.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
419.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
414.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
411.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
390.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
377.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
370.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
368.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
364.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
356.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
350.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
341.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
332.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
328.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
320.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
320.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
314.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
313.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
312.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
310.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
304.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
301.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
298.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
295.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
294.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
293.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
288.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
284.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
281.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
280.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
278.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
269.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
268.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
266.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
261.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
261.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
260.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
259.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
259.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
256.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
252.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
251.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
251.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
249.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
248.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
246.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
246.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
242.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
241.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
240.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
236.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
236.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
235.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
234.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
232.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
231.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
231.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
230.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
226.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
224.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
224.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
223.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
223.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
222.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
222.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
221.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
221.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
221.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
221.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
220.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
220.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
218.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
217.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
214.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
213.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
212.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
211.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
211.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
211.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
211.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
210.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
210.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
210.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
208.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
207.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
207.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
206.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
206.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
206.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
205.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
205.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
205.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
205.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
204.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
204.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
203.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
202.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
201.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
200.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
199.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
199.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
199.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
198.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
198.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
197.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
196.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
195.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
195.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
193.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
193.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
193.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
192.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
191.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
191.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
190.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
188.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
187.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
187.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
187.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
186.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
186.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
186.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
185.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
185.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
184.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
184.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
183.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
183.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
183.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
183.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
182.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
182.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
182.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
182.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
182.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
182.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
181.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
180.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
179.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
179.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
179.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
179.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
178.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
177.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
176.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
175.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
174.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
173.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
173.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
173.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
173.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
172.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
172.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
171.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
171.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
171.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
169.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
167.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
167.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
166.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
166.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
166.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
166.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
165.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
165.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
165.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
164.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
164.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
164.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
163.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
163.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
162.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
162.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
162.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
161.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
160.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
160.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
160.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
159.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
159.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
158.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
158.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
158.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
157.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
157.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
157.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
157.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
156.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
156.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
155.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
155.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
155.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
154.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
154.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
154.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
154.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
154.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
154.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
153.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
153.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
153.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
153.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
153.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
152.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
152.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
152.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
152.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
152.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
151.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
151.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
150.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
150.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
150.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
150.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
149.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
149.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
148.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
148.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
147.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
147.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
146.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
146.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
145.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
145.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
144.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
144.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
144.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
143.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
143.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
143.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
142.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
142.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
142.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
141.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
141.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
141.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
140.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
140.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
140.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
140.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
140.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
139.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
139.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
139.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
139.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
139.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
139.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
138.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
138.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
138.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
138.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
138.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
136.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
136.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
136.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
136.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
136.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
135.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
135.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
135.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
135.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
134.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
134.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
134.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
134.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
133.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
133.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
133.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
132.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
132.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
131.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
131.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
131.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
131.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
131.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
130.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
130.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
130.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
129.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
129.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
129.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
129.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
129.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
128.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
128.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
127.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
127.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
126.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
126.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
126.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
126.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
126.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
126.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
126.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
125.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
125.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
125.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
124.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
124.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
124.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
124.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
123.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
123.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
123.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
123.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
123.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
122.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
121.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
121.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
121.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
120.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
119.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
118.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
118.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
118.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
118.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
117.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
117.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
117.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
117.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
116.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
116.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
116.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
115.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
114.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
114.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
114.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
113.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
113.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
113.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
113.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
113.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
112.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
112.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
112.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
112.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
111.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
110.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
109.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
109.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
109.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
108.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
108.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
107.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
107.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
107.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
107.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
107.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
106.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
105.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
104.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
104.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
104.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
104.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
104.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
104.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
103.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
103.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
103.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
103.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
103.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
103.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
102.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
102.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
102.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
102.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
102.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
101.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
101.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
100.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
100.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
99.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
99.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
99.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
99.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
99.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
99.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
99.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
98.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
98.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
98.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
98.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
96.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
96.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
96.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
96.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
96.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
95.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
95.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
95.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
95.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
95.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
94.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
94.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
93.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
93.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
93.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
92.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
92.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
92.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
92.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
92.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
92.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
91.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
91.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
90.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
90.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
90.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
90.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
90.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
90.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
90.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
89.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
89.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
89.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
89.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
88.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
88.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
88.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
87.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
87.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
87.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
87.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
86.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
86.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
86.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
86.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
85.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
85.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
85.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
85.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
84.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
84.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
84.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
83.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
83.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
83.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
80.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
79.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
79.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
79.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
78.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
78.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
77.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
77.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
77.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
76.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
75.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
75.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
75.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
75.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
74.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
74.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
74.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
74.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
74.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
74.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
74.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
73.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
72.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
71.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
70.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
70.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
70.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
70.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
69.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
69.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
69.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
69.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
69.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
68.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
68.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
67.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
67.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
66.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
66.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
65.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
65.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
64.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
64.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
63.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
60.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
59.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
59.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
59.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
58.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
57.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
57.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
57.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
55.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
55.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
54.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
52.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
51.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
51.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
51.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
51.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
49.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
49.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
47.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
46.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
43.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
43.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
42.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
42.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
41.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
41.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
40.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
37.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
37.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
29.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SDC4 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
151.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
659.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
450.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
342.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
333.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
283.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
280.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
270.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
263.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
257.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
256.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
245.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
245.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
219.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
216.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
210.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
207.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
204.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
203.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
200.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
189.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
189.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
188.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
177.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
172.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
172.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
171.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
169.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
167.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
158.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
158.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
158.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
157.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
157.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
157.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
156.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
154.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
154.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
152.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
150.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
144.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
143.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
142.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
142.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
141.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
141.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
140.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
140.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
139.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
137.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
135.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
131.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
130.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
128.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
127.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
126.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
125.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
125.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
124.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
123.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
123.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
123.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
122.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
120.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
120.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
114.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
113.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
112.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
110.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
110.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
108.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
108.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
108.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
108.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
104.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
101.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
100.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
98.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
97.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
95.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
95.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
94.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
93.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
93.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
92.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
92.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
92.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
92.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
91.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
85.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
83.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
82.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
77.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
77.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
76.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
71.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
54.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
54.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SDC4 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
297.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
889.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
863.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
822.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
775.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
750.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
732.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
725.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
722.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
694.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
677.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
672.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
665.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
654.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
653.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
641.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
626.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
623.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
622.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
595.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
590.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
584.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
557.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
553.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
543.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
539.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
537.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
519.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
518.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
516.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
511.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
506.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
496.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
493.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
490.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
489.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
488.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
482.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
478.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
475.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
469.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
469.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
469.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
469.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
468.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
468.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
453.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
449.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
448.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
447.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
445.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
439.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
437.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
433.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
432.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
428.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
426.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
424.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
424.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
422.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
422.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
422.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
420.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
413.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
408.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
406.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
403.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
401.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
399.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
398.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
397.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
394.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
389.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
389.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
388.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
387.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
386.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
385.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
381.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
376.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
375.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
374.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
371.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
368.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
367.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
367.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
363.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
362.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
362.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
362.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
361.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
358.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
358.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
356.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
354.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
354.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
347.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
346.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
346.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
341.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
339.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
339.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
333.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
333.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
332.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
331.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
329.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
328.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
326.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
325.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
322.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
316.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
312.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
312.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
310.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
310.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
309.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
308.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
308.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
303.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
302.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
289.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
289.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
288.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
284.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
284.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
284.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
281.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
281.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
280.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
278.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
276.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
272.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
270.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
267.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
262.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
261.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
260.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
260.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
260.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
257.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
257.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
255.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
255.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
254.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
250.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
250.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
250.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
249.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
248.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
247.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
247.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
246.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
245.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
242.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
240.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
238.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
238.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
237.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
234.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
234.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
234.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
231.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
230.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
230.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
229.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
229.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
227.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
225.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
222.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
219.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
219.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
217.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
216.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
214.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
213.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
211.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
211.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
207.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
204.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
204.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
201.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
200.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
198.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
197.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
196.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
196.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
194.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
194.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
194.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
193.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
191.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
189.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
188.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
187.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
185.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
184.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
182.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
182.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
182.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
178.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
178.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
177.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
177.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
176.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
175.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
175.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
173.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
169.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
169.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
167.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
164.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
163.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
163.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
162.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
162.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
162.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
161.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
159.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
158.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
155.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
155.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
152.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
151.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
151.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
150.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
150.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
150.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
149.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
149.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
148.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
148.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
147.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
146.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
145.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
144.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
144.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
142.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
141.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
140.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
139.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
138.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
134.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
132.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
131.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
128.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
128.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
127.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
126.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
125.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
124.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
121.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
118.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
116.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
116.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
112.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
111.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
109.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
103.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
102.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
101.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
99.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
98.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
97.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
96.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
96.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
94.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
93.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
90.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
90.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
89.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
89.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
86.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
86.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
85.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
80.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
73.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
70.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
70.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
69.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
68.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
65.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
51.5
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078660003
Tumor
1.6
CPT0079180003
Tumor
1.3
CPT0011410003
Tumor
1.1
CPT0078800003
Tumor
1.1
CPT0066430001
Normal
0.9
CPT0063640001
Normal
0.9
CPT0076350001
Normal
0.8
CPT0012770003
Normal
0.7
CPT0065450001
Normal
0.7
CPT0001190001
Normal
0.6
CPT0023710001
Normal
0.6
CPT0088970003
Tumor
0.6
CPT0092740003
Normal
0.6
CPT0026420001
Normal
0.6
CPT0000790001
Normal
0.6
CPT0069010001
Normal
0.6
CPT0006950001
Normal
0.6
CPT0006730001
Normal
0.6
CPT0014350001
Normal
0.6
CPT0025060001
Normal
0.6
CPT0065820001
Normal
0.6
CPT0077140001
Normal
0.5
CPT0088710001
Normal
0.5
CPT0089040001
Normal
0.5
CPT0001350001
Normal
0.5
CPT0001270001
Normal
0.5
CPT0013790003
Normal
0.5
CPT0006530001
Normal
0.5
CPT0018250001
Normal
0.5
CPT0079000001
Normal
0.5
CPT0092310003
Normal
0.5
CPT0023360001
Normal
0.5
CPT0069190001
Normal
0.5
CPT0014130001
Normal
0.5
CPT0012290003
Normal
0.5
CPT0066520001
Normal
0.5
CPT0079430001
Normal
0.5
CPT0020130001
Normal
0.5
CPT0081620001
Normal
0.5
CPT0025610001
Normal
0.5
CPT0077500001
Normal
0.5
CPT0077320001
Normal
0.4
CPT0012090003
Normal
0.4
CPT0000890001
Normal
0.4
CPT0082010001
Normal
0.4
CPT0017450001
Normal
0.4
CPT0087050003
Normal
0.4
CPT0092800003
Normal
0.4
CPT0010170001
Normal
0.4
CPT0078670001
Normal
0.4
CPT0020020001
Normal
0.4
CPT0075170001
Normal
0.4
CPT0012570003
Normal
0.4
CPT0088920001
Normal
0.4
CPT0009080003
Normal
0.4
CPT0025920001
Normal
0.4
CPT0007470001
Normal
0.4
CPT0088780001
Normal
0.4
CPT0078840001
Normal
0.3
CPT0079300001
Normal
0.3
CPT0024680001
Normal
0.3
CPT0086370003
Normal
0.3
CPT0001510001
Normal
0.3
CPT0084590001
Normal
0.3
CPT0002270011
Tumor
0.3
CPT0064400001
Normal
0.3
CPT0012280003
Tumor
0.3
CPT0088570001
Normal
0.3
CPT0069000003
Tumor
0.3
CPT0089480003
Normal
0.3
CPT0000660001
Normal
0.3
CPT0025170003
Tumor
0.2
CPT0088640003
Normal
0.2
CPT0007870001
Normal
0.2
CPT0078530001
Normal
0.2
CPT0088500001
Normal
0.2
CPT0075570001
Normal
0.2
CPT0025050003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0063330001
Normal
0.2
CPT0001230001
Normal
0.2
CPT0076330003
Tumor
0.2
CPT0065750003
Tumor
0.1
CPT0086970003
Normal
0.1
CPT0086890003
Normal
0.1
CPT0086830003
Normal
0.1
CPT0078940001
Normal
0.1
CPT0012640003
Normal
0.1
CPT0009020003
Normal
0.1
CPT0012920003
Normal
0.1
CPT0069160003
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0015730003
Tumor
0.0
CPT0086360003
Tumor
0.0
CPT0079270003
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0001220008
Tumor
-0.1
CPT0001550001
Normal
-0.1
CPT0065810003
Tumor
-0.1
CPT0002370001
Normal
-0.1
CPT0012550003
Tumor
-0.1
CPT0020120003
Tumor
-0.1
CPT0063630003
Tumor
-0.1
CPT0025580004
Tumor
-0.1
CPT0064370003
Tumor
-0.2
CPT0001500009
Tumor
-0.2
CPT0084560003
Tumor
-0.2
CPT0014160003
Tumor
-0.3
CPT0017850003
Tumor
-0.3
CPT0092190003
Normal
-0.3
CPT0006630003
Tumor
-0.3
CPT0063320003
Tumor
-0.3
CPT0014450004
Tumor
-0.3
CPT0086950003
Tumor
-0.4
CPT0079480003
Tumor
-0.4
CPT0079230003
Tumor
-0.4
CPT0009060003
Tumor
-0.4
CPT0077310003
Tumor
-0.4
CPT0019130003
Tumor
-0.4
CPT0079510001
Normal
-0.4
CPT0092160003
Tumor
-0.4
CPT0065930003
Tumor
-0.4
CPT0012180003
Tumor
-0.4
CPT0077110003
Tumor
-0.4
CPT0001180009
Tumor
-0.4
CPT0088900003
Tumor
-0.4
CPT0012670003
Tumor
-0.5
CPT0075720003
Tumor
-0.5
CPT0092290003
Tumor
-0.5
CPT0086820003
Tumor
-0.5
CPT0087040003
Tumor
-0.5
CPT0015810003
Tumor
-0.5
CPT0012370003
Tumor
-0.5
CPT0012900004
Tumor
-0.6
CPT0086030003
Tumor
-0.6
CPT0019990003
Tumor
-0.6
CPT0021240003
Tumor
-0.6
CPT0023690003
Tumor
-0.6
CPT0009000003
Tumor
-0.7
CPT0023350003
Tumor
-0.7
CPT0071150004
Tumor
-0.7
CPT0007860003
Tumor
-0.7
CPT0001540009
Tumor
-0.7
CPT0006900003
Tumor
-0.7
CPT0026410003
Tumor
-0.7
CPT0075560003
Tumor
-0.7
CPT0025230003
Tumor
-0.7
CPT0089020003
Tumor
-0.7
CPT0078930003
Tumor
-0.7
CPT0010110003
Tumor
-0.7
CPT0065870003
Tumor
-0.8
CPT0006440003
Tumor
-0.8
CPT0025110003
Tumor
-0.8
CPT0092790003
Tumor
-0.8
CPT0011240003
Tumor
-0.8
CPT0079380003
Tumor
-0.8
CPT0075130003
Tumor
-0.8
CPT0088690003
Tumor
-0.8
CPT0015910003
Tumor
-0.8
CPT0000780007
Tumor
-0.8
CPT0017410003
Tumor
-0.9
CPT0066470004
Tumor
-0.9
CPT0014370004
Tumor
-0.9
CPT0078510003
Tumor
-0.9
CPT0025290003
Tumor
-0.9
CPT0092730003
Tumor
-0.9
CPT0081880003
Tumor
-0.9
CPT0078830003
Tumor
-0.9
CPT0088550004
Tumor
-0.9
CPT0078990003
Tumor
-0.9
CPT0081990003
Tumor
-0.9
CPT0079410003
Tumor
-1.0
CPT0002350011
Tumor
-1.0
CPT0025350003
Tumor
-1.0
CPT0081600003
Tumor
-1.0
CPT0089460004
Tumor
-1.0
CPT0000640003
Tumor
-1.1
CPT0085670003
Tumor
-1.1
CPT0077490003
Tumor
-1.1
CPT0065690003
Tumor
-1.2
CPT0086870003
Tumor
-1.2
CPT0088630003
Tumor
-1.2
CPT0001260009
Tumor
-1.2
CPT0066480003
Tumor
-1.2
CPT0000870016
Tumor
-1.2
CPT0001340003
Tumor
-1.2
CPT0010160003
Tumor
-1.3
CPT0025880003
Tumor
-1.4
CPT0012080003
Tumor
-1.5
CPT0088760003
Tumor
-1.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.