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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAB9A is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
34.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
92.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
91.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
82.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
73.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
72.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
70.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
70.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
67.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
67.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
55.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
55.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
52.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
50.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
42.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
42.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
41.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
41.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
41.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
40.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
40.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
40.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
38.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
36.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
36.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
33.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
33.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
32.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
32.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
32.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
32.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
30.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
28.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
28.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
27.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
27.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
27.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
26.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
26.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
26.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
25.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
25.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
25.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
23.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
23.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
22.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
22.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
21.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
20.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
19.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
18.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
17.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
16.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
16.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
16.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
15.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
15.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
15.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
14.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
14.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
14.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
13.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
12.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
10.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAB9A is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
78.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
76.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
66.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
66.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
64.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
63.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
58.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
54.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
53.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
53.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
51.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
49.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
49.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
48.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
48.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
47.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
47.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
45.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
45.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
45.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
45.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
45.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
45.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
44.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
44.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
43.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
43.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
42.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
42.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
42.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
42.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
42.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
42.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
42.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
42.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
41.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
41.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
40.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
40.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
40.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
40.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
40.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
40.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
40.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
39.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
39.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
39.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
39.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
39.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
39.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
39.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
39.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
38.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
38.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
38.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
38.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
38.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
38.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
38.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
38.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
38.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
38.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
38.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
37.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
37.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
37.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
37.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
37.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
37.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
37.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
37.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
36.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
36.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
36.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
36.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
36.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
36.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
36.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
36.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
36.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
36.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
36.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
35.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
35.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
35.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
35.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
35.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
35.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
35.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
35.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
35.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
35.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
35.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
35.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
35.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
35.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
35.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
35.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
35.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
35.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
34.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
34.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
34.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
34.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
34.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
34.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
34.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
34.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
34.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
34.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
34.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
34.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
33.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
33.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
33.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
33.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
33.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
33.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
33.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
33.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
33.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
33.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
33.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
33.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
33.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
33.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
33.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
33.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
33.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
33.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
33.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
33.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
33.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
32.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
32.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
32.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
32.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
32.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
32.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
32.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
32.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
32.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
32.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
32.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
32.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
32.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
32.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
32.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
32.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
32.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
32.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
32.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
32.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
32.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
32.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
32.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
32.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
32.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
31.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
31.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
31.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
31.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
31.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
31.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
31.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
31.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
31.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
31.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
31.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
31.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
31.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
31.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
31.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
31.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
31.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
31.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
30.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
30.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
30.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
30.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
30.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
30.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
30.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
30.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
30.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
30.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
30.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
30.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
30.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
30.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
30.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
30.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
30.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
30.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
30.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
30.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
29.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
29.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
29.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
29.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
29.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
29.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
29.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
29.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
29.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
29.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
29.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
29.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
29.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
29.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
29.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
29.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
29.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
29.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
29.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
29.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
29.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
29.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
29.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
29.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
29.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
29.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
29.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
29.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
28.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
28.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
28.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
28.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
28.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
28.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
28.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
28.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
28.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
28.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
28.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
28.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
28.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
28.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
28.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
28.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
28.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
28.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
27.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
27.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
27.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
27.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
27.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
27.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
27.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
27.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
27.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
27.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
27.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
27.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
27.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
27.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
27.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
27.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
27.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
27.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
27.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
27.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
27.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
27.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
27.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
26.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
26.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
26.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
26.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
26.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
26.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
26.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
26.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
26.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
26.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
26.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
26.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
26.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
26.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
26.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
26.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
26.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
26.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
26.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
25.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
25.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
25.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
25.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
25.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
25.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
25.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
25.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
25.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
25.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
25.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
25.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
25.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
25.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
25.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
25.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
25.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
25.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
25.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
25.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
25.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
25.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
25.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
25.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
25.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
25.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
25.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
25.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
25.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
25.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
25.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
24.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
24.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
24.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
24.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
24.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
24.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
24.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
24.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
24.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
24.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
24.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
24.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
24.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
24.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
24.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
24.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
24.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
24.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
24.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
24.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
24.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
23.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
23.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
23.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
23.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
23.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
23.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
23.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
23.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
23.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
23.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
23.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
23.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
23.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
23.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
23.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
23.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
23.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
23.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
23.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
23.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
23.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
23.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
23.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
22.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
22.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
22.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
22.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
22.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
22.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
22.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
22.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
22.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
22.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
22.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
22.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
22.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
22.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
22.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
22.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
22.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
22.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
22.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
22.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
21.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
21.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
21.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
21.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
21.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
21.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
21.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
21.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
21.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
21.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
21.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
21.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
21.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
21.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
20.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
20.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
20.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
20.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
20.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
20.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
20.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
20.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
20.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
20.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
20.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
20.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
20.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
20.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
20.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
20.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
20.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
20.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
19.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
19.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
19.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
19.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
19.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
19.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
19.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
19.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
19.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
18.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
18.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
18.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
18.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
18.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
18.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
18.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
18.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
18.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
18.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
17.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
17.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
17.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
17.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
17.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
17.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
17.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
17.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
16.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
16.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
16.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
16.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
16.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
16.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
16.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
16.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
15.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
15.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
15.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
15.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
15.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
15.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
15.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
14.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
14.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
14.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
14.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
14.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
14.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
14.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
14.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
14.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
14.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
14.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
14.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
14.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
14.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
14.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
14.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
14.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
14.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
13.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
13.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
13.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
13.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
13.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
13.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
13.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
13.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
13.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
13.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
13.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
13.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
13.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
13.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
12.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
12.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
12.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
12.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
12.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
12.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
12.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
11.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
11.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
11.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
11.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
11.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
11.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
11.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
10.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
10.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
10.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
10.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
10.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
9.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
9.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
9.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
9.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
9.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
8.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
7.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
7.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
7.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
7.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
7.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
6.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
6.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
5.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAB9A is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
63.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
62.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
52.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
50.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
49.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
49.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
47.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
46.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
45.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
44.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
44.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
44.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
43.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
43.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
42.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
42.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
42.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
41.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
40.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
40.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
40.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
40.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
40.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
39.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
39.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
39.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
39.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
39.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
38.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
37.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
37.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
36.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
36.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
36.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
35.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
35.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
35.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
34.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
34.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
34.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
34.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
34.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
33.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
33.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
33.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
32.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
32.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
32.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
32.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
31.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
31.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
31.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
31.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
30.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
30.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
30.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
30.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
30.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
30.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
30.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
30.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
29.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
28.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
28.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
28.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
28.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
28.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
28.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
28.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
28.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
28.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
27.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
27.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
27.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
26.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
26.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
26.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
26.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
26.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
26.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
26.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
26.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
24.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
24.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
24.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
24.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
23.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
23.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
22.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
22.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
22.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
20.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
20.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
19.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
18.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
18.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
17.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
14.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAB9A is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
94.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
82.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
73.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
69.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
63.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
63.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
63.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
62.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
62.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
61.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
61.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
59.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
59.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
58.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
56.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
55.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
54.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
54.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
52.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
52.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
49.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
48.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
47.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
47.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
46.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
45.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
45.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
44.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
44.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
43.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
43.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
43.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
42.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
42.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
42.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
42.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
41.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
41.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
41.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
41.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
40.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
40.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
39.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
39.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
38.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
38.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
38.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
38.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
38.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
37.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
37.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
36.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
36.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
36.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
36.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
36.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
35.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
35.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
34.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
34.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
34.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
34.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
34.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
34.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
34.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
33.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
33.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
33.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
33.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
33.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
33.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
32.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
32.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
32.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
32.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
31.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
31.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
31.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
31.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
31.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
30.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
30.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
30.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
30.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
30.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
30.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
29.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
29.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
29.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
29.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
29.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
29.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
28.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
28.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
28.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
28.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
28.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
28.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
28.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
28.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
28.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
28.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
28.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
28.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
27.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
27.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
27.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
27.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
27.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
27.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
27.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
27.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
27.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
27.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
26.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
26.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
26.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
26.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
26.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
26.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
26.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
26.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
26.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
25.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
25.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
25.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
25.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
25.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
25.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
25.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
25.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
25.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
25.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
25.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
25.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
24.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
24.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
24.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
24.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
24.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
24.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
24.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
24.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
24.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
24.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
24.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
24.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
23.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
23.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
23.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
23.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
23.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
23.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
23.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
23.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
22.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
22.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
22.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
22.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
22.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
22.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
22.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
22.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
22.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
22.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
22.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
22.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
21.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
21.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
21.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
21.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
21.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
21.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
21.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
21.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
21.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
21.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
21.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
21.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
20.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
20.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
20.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
20.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
20.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
20.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
20.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
20.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
20.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
20.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
19.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
19.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
19.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
19.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
19.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
19.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
19.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
19.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
19.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
19.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
19.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
18.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
18.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
18.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
18.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
18.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
18.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
18.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
18.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
18.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
18.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
17.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
17.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
17.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
17.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
17.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
17.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
17.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
17.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
17.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
16.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
16.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
16.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
16.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
16.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
16.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
16.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
15.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
15.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
15.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
15.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
15.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
15.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
15.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
15.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
15.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
15.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
15.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
14.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
14.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
14.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
14.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
14.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
14.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
14.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
13.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
13.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
13.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
13.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
13.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
12.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
12.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
11.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
11.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
11.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
10.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
10.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
10.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
10.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
10.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
10.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
10.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
9.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
9.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
9.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
8.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
8.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
7.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
7.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
7.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
6.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
6.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
6.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
5.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
5.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
5.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
5.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
4.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
4.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
3.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
2.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
2.3
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
1.8
CPT0012550003
Tumor
1.2
CPT0078660003
Tumor
1.2
CPT0065430003
Tumor
0.9
CPT0023350003
Tumor
0.8
CPT0001340003
Tumor
0.7
CPT0015730003
Tumor
0.7
CPT0007320003
Tumor
0.6
CPT0063630003
Tumor
0.6
CPT0002350011
Tumor
0.6
CPT0014160003
Tumor
0.6
CPT0065750003
Tumor
0.6
CPT0081880003
Tumor
0.5
CPT0025050003
Tumor
0.5
CPT0092160003
Tumor
0.5
CPT0010110003
Tumor
0.4
CPT0014450004
Tumor
0.4
CPT0088970003
Tumor
0.4
CPT0088480003
Tumor
0.4
CPT0088550004
Tumor
0.4
CPT0000640003
Tumor
0.4
CPT0064370003
Tumor
0.4
CPT0001180009
Tumor
0.4
CPT0086950003
Tumor
0.3
CPT0015810003
Tumor
0.3
CPT0086360003
Tumor
0.3
CPT0086820003
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0065690003
Tumor
0.3
CPT0025110003
Tumor
0.3
CPT0001540009
Tumor
0.3
CPT0078800003
Tumor
0.3
CPT0001220008
Tumor
0.2
CPT0082010001
Normal
0.2
CPT0079480003
Tumor
0.2
CPT0019130003
Tumor
0.2
CPT0069000003
Tumor
0.2
CPT0089020003
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0065930003
Tumor
0.2
CPT0001190001
Normal
0.2
CPT0078930003
Tumor
0.2
CPT0078990003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0012180003
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0079380003
Tumor
0.1
CPT0086030003
Tumor
0.1
CPT0011410003
Tumor
0.1
CPT0071150004
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0006630003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0076330003
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0092800003
Normal
0.1
CPT0019990003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0000790001
Normal
0.1
CPT0026420001
Normal
0.1
CPT0077110003
Tumor
0.1
CPT0077310003
Tumor
0.1
CPT0092290003
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0088920001
Normal
0.1
CPT0063640001
Normal
0.1
CPT0001500009
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0006730001
Normal
0.1
CPT0006440003
Tumor
0.1
CPT0092310003
Normal
0.1
CPT0078830003
Tumor
0.0
CPT0065810003
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0092740003
Normal
0.0
CPT0012370003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0065450001
Normal
0.0
CPT0014470001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0010170001
Normal
0.0
CPT0002270011
Tumor
0.0
CPT0077140001
Normal
0.0
CPT0026410003
Tumor
0.0
CPT0092730003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0009060003
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0025230003
Tumor
0.0
CPT0025290003
Tumor
0.0
CPT0025880003
Tumor
0.0
CPT0089460004
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0079510001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0023710001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0084560003
Tumor
-0.1
CPT0077490003
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0081990003
Tumor
-0.1
CPT0085670003
Tumor
-0.1
CPT0069010001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0063320003
Tumor
-0.1
CPT0063330001
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0088900003
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0025580004
Tumor
-0.1
CPT0086970003
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0025060001
Normal
-0.1
CPT0081600003
Tumor
-0.1
CPT0009000003
Tumor
-0.1
CPT0066470004
Tumor
-0.1
CPT0006950001
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0010160003
Tumor
-0.1
CPT0078940001
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0014130001
Normal
-0.1
CPT0086830003
Normal
-0.2
CPT0075130003
Tumor
-0.2
CPT0086370003
Normal
-0.2
CPT0069190001
Normal
-0.2
CPT0001270001
Normal
-0.2
CPT0088760003
Tumor
-0.2
CPT0025610001
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0078510003
Tumor
-0.2
CPT0001550001
Normal
-0.2
CPT0006530001
Normal
-0.2
CPT0075170001
Normal
-0.2
CPT0077320001
Normal
-0.2
CPT0000660001
Normal
-0.2
CPT0075720003
Tumor
-0.2
CPT0014370004
Tumor
-0.2
CPT0000890001
Normal
-0.2
CPT0069160003
Tumor
-0.2
CPT0020130001
Normal
-0.2
CPT0025170003
Tumor
-0.2
CPT0021240003
Tumor
-0.2
CPT0087050003
Normal
-0.2
CPT0010120001
Normal
-0.3
CPT0078530001
Normal
-0.3
CPT0065870003
Tumor
-0.3
CPT0020020001
Normal
-0.3
CPT0086890003
Normal
-0.3
CPT0092190003
Normal
-0.3
CPT0079300001
Normal
-0.3
CPT0018250001
Normal
-0.3
CPT0012640003
Normal
-0.3
CPT0001260009
Tumor
-0.3
CPT0075570001
Normal
-0.3
CPT0017450001
Normal
-0.3
CPT0012670003
Tumor
-0.3
CPT0002370001
Normal
-0.4
CPT0012920003
Normal
-0.4
CPT0088630003
Tumor
-0.4
CPT0007860003
Tumor
-0.4
CPT0086870003
Tumor
-0.4
CPT0025920001
Normal
-0.4
CPT0024680001
Normal
-0.4
CPT0000780007
Tumor
-0.4
CPT0012090003
Normal
-0.4
CPT0012900004
Tumor
-0.4
CPT0015910003
Tumor
-0.4
CPT0009080003
Normal
-0.5
CPT0017850003
Tumor
-0.5
CPT0012080003
Tumor
-0.5
CPT0011240003
Tumor
-0.6
CPT0009020003
Normal
-0.6
CPT0017410003
Tumor
-1.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
