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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OPTN is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
91.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
87.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
81.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
80.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
70.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
55.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
54.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
43.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
42.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
40.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
36.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
36.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
36.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
34.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
34.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
34.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
34.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
33.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
33.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
32.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
32.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
31.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
30.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
30.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
29.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
29.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
28.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
27.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
27.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
26.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
26.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
26.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
24.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
24.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
24.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
23.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
23.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
23.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
21.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
21.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
21.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
20.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
20.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
19.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
18.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
17.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
17.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
17.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
16.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
14.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
14.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
14.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
13.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
13.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
12.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
12.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
11.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
11.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
11.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
10.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
9.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
8.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
8.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OPTN is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
71.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
184.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
178.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
150.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
143.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
138.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
134.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
134.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
134.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
128.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
128.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
123.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
123.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
123.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
123.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
122.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
121.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
121.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
120.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
119.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
118.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
118.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
118.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
117.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
117.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
116.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
114.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
113.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
113.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
112.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
112.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
112.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
111.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
111.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
110.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
110.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
109.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
109.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
109.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
108.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
108.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
107.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
107.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
106.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
104.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
104.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
104.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
104.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
103.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
103.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
103.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
102.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
102.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
102.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
101.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
101.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
100.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
100.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
100.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
100.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
100.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
99.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
99.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
99.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
99.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
99.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
98.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
98.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
98.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
98.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
98.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
97.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
97.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
97.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
97.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
96.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
96.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
96.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
96.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
96.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
96.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
95.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
95.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
95.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
95.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
95.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
95.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
95.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
95.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
95.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
95.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
94.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
94.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
94.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
94.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
94.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
94.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
94.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
93.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
93.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
93.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
93.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
93.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
93.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
93.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
93.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
93.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
92.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
92.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
92.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
91.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
91.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
91.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
91.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
91.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
91.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
91.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
91.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
91.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
91.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
91.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
91.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
91.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
90.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
90.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
90.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
90.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
90.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
90.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
90.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
89.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
89.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
89.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
89.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
89.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
88.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
88.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
88.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
88.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
88.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
87.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
87.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
87.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
87.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
87.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
87.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
87.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
86.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
86.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
86.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
86.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
86.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
86.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
86.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
86.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
85.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
85.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
85.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
85.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
85.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
85.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
84.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
84.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
84.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
84.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
83.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
83.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
83.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
83.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
83.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
83.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
82.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
82.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
82.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
82.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
82.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
82.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
82.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
81.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
81.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
81.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
81.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
81.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
81.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
81.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
81.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
81.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
81.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
80.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
80.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
80.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
80.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
80.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
80.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
80.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
80.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
80.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
80.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
80.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
80.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
79.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
79.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
79.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
79.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
79.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
79.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
78.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
78.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
78.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
78.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
78.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
78.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
77.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
77.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
77.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
77.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
77.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
77.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
77.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
77.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
77.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
77.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
77.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
77.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
77.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
77.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
76.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
76.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
76.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
76.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
76.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
76.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
76.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
76.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
75.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
75.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
75.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
75.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
75.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
74.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
74.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
74.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
74.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
74.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
74.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
74.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
73.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
73.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
73.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
73.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
73.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
73.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
73.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
73.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
73.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
72.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
72.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
72.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
72.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
72.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
72.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
72.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
72.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
72.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
72.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
71.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
71.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
71.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
71.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
71.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
71.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
71.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
71.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
71.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
71.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
70.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
70.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
70.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
70.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
70.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
70.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
70.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
69.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
69.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
69.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
69.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
69.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
69.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
69.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
69.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
69.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
68.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
68.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
68.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
68.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
68.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
68.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
68.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
67.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
67.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
67.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
67.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
67.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
67.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
67.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
67.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
67.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
66.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
66.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
66.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
66.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
66.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
66.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
66.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
66.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
65.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
65.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
65.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
65.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
64.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
64.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
64.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
64.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
64.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
63.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
63.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
63.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
63.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
63.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
62.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
62.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
62.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
62.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
62.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
62.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
62.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
61.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
61.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
61.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
61.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
61.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
60.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
60.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
60.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
60.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
60.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
59.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
59.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
59.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
59.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
59.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
59.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
58.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
58.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
58.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
58.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
58.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
58.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
58.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
58.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
58.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
58.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
57.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
57.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
57.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
57.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
56.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
56.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
56.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
55.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
55.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
55.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
55.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
55.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
55.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
55.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
54.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
54.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
54.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
54.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
54.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
54.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
54.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
53.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
53.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
53.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
53.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
53.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
53.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
52.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
52.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
52.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
52.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
52.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
52.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
52.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
52.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
52.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
52.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
52.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
52.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
52.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
52.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
52.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
51.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
51.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
51.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
51.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
51.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
51.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
50.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
50.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
50.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
50.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
49.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
49.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
48.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
48.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
48.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
48.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
48.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
47.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
47.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
47.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
47.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
47.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
47.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
47.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
46.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
46.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
46.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
46.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
46.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
46.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
46.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
45.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
45.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
45.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
45.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
45.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
45.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
45.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
45.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
45.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
45.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
45.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
45.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
44.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
44.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
44.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
43.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
43.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
43.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
43.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
41.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
40.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
40.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
40.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
40.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
39.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
39.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
39.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
39.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
39.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
39.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
39.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
38.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
38.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
38.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
38.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
38.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
37.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
37.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
37.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
37.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
36.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
36.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
35.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
35.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
34.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
34.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
33.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
33.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
33.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
32.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
32.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
32.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
31.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
31.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
31.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
31.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
30.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
30.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
30.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
30.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
29.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
29.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
28.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
28.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
27.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
27.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
27.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
26.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
26.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
25.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
25.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
24.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
24.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
23.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
22.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
21.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
20.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
19.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
18.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
18.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
16.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
15.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
14.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
14.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
13.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
12.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OPTN is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
96.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
208.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
154.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
142.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
136.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
136.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
136.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
135.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
134.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
131.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
129.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
126.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
126.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
123.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
121.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
121.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
120.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
120.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
120.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
119.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
119.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
119.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
118.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
117.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
116.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
115.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
112.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
112.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
111.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
109.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
108.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
108.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
107.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
107.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
107.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
106.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
105.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
105.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
105.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
104.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
104.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
104.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
104.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
103.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
102.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
98.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
98.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
98.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
97.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
97.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
96.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
94.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
94.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
94.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
92.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
92.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
92.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
91.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
91.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
90.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
90.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
90.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
89.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
88.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
87.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
87.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
87.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
86.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
85.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
85.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
83.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
82.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
81.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
79.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
78.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
77.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
76.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
76.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
74.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
73.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
72.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
71.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
71.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
71.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
67.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
66.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
66.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
65.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
64.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
60.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
58.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
58.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
58.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
57.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
56.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
54.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
52.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
52.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
45.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
42.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OPTN is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
45.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
140.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
138.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
130.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
121.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
112.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
111.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
106.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
105.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
105.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
101.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
98.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
96.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
96.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
94.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
92.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
91.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
90.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
89.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
89.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
88.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
88.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
88.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
88.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
87.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
86.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
84.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
84.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
84.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
83.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
82.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
82.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
80.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
79.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
75.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
73.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
72.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
72.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
72.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
69.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
69.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
69.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
68.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
68.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
67.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
67.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
67.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
67.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
66.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
66.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
65.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
65.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
65.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
64.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
63.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
62.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
62.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
61.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
61.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
59.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
59.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
59.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
59.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
58.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
57.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
57.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
57.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
56.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
56.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
56.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
55.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
55.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
55.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
54.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
54.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
53.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
53.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
53.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
53.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
53.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
53.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
53.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
53.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
52.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
52.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
52.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
52.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
52.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
52.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
52.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
51.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
51.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
51.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
50.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
50.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
50.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
50.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
49.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
49.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
49.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
48.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
48.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
48.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
48.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
48.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
47.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
47.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
47.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
47.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
46.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
46.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
46.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
46.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
46.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
45.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
45.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
45.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
45.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
45.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
44.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
44.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
44.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
44.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
44.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
44.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
43.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
43.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
43.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
43.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
43.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
43.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
43.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
42.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
42.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
42.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
42.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
42.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
41.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
40.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
40.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
40.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
39.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
39.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
39.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
39.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
39.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
39.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
38.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
38.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
38.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
38.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
38.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
38.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
37.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
37.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
36.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
36.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
36.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
36.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
36.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
36.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
36.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
35.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
35.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
35.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
35.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
35.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
35.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
34.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
34.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
34.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
34.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
34.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
34.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
34.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
33.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
33.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
33.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
33.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
33.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
33.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
33.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
32.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
32.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
32.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
32.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
32.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
32.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
31.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
31.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
31.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
31.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
31.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
31.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
31.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
31.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
31.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
30.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
30.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
30.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
29.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
29.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
29.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
29.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
29.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
28.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
28.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
28.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
28.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
27.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
27.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
27.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
27.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
27.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
27.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
26.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
26.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
26.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
26.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
26.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
26.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
26.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
26.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
26.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
26.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
26.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
26.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
25.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
25.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
25.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
25.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
25.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
25.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
25.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
25.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
24.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
24.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
24.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
24.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
24.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
24.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
23.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
23.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
23.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
23.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
23.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
22.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
22.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
22.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
22.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
22.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
22.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
20.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
20.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
20.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
20.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
20.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
20.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
18.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
18.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
18.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
18.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
18.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
18.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
17.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
17.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
16.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
16.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
16.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
15.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
13.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
13.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
13.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
13.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
12.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
12.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
12.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
11.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
11.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
10.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
10.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
7.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
7.5
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088970003
Tumor
0.8
CPT0009060003
Tumor
0.8
CPT0088550004
Tumor
0.8
CPT0007320003
Tumor
0.8
CPT0002270011
Tumor
0.7
CPT0001540009
Tumor
0.6
CPT0015810003
Tumor
0.6
CPT0084560003
Tumor
0.6
CPT0001500009
Tumor
0.6
CPT0078830003
Tumor
0.5
CPT0001340003
Tumor
0.5
CPT0012280003
Tumor
0.5
CPT0086360003
Tumor
0.5
CPT0001180009
Tumor
0.5
CPT0065430003
Tumor
0.4
CPT0071150004
Tumor
0.4
CPT0065870003
Tumor
0.4
CPT0092160003
Tumor
0.4
CPT0023350003
Tumor
0.4
CPT0012370003
Tumor
0.3
CPT0025050003
Tumor
0.3
CPT0006730001
Normal
0.3
CPT0079380003
Tumor
0.3
CPT0011240003
Tumor
0.3
CPT0012180003
Tumor
0.3
CPT0086950003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0088480003
Tumor
0.3
CPT0088920001
Normal
0.3
CPT0009080003
Normal
0.3
CPT0014350001
Normal
0.3
CPT0063640001
Normal
0.3
CPT0069000003
Tumor
0.3
CPT0078840001
Normal
0.3
CPT0088690003
Tumor
0.3
CPT0078800003
Tumor
0.3
CPT0000790001
Normal
0.3
CPT0006530001
Normal
0.3
CPT0025610001
Normal
0.3
CPT0023360001
Normal
0.3
CPT0010110003
Tumor
0.2
CPT0065450001
Normal
0.2
CPT0018250001
Normal
0.2
CPT0006630003
Tumor
0.2
CPT0089480003
Normal
0.2
CPT0001220008
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0077500001
Normal
0.2
CPT0092740003
Normal
0.2
CPT0078530001
Normal
0.2
CPT0065820001
Normal
0.2
CPT0076330003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0092800003
Normal
0.2
CPT0079480003
Tumor
0.2
CPT0012090003
Normal
0.2
CPT0077140001
Normal
0.2
CPT0017410003
Tumor
0.2
CPT0023710001
Normal
0.2
CPT0088570001
Normal
0.2
CPT0012770003
Normal
0.2
CPT0000890001
Normal
0.2
CPT0000870016
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0078990003
Tumor
0.1
CPT0010170001
Normal
0.1
CPT0007870001
Normal
0.1
CPT0001270001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0066430001
Normal
0.1
CPT0078930003
Tumor
0.1
CPT0000660001
Normal
0.1
CPT0065750003
Tumor
0.1
CPT0001350001
Normal
0.1
CPT0014450004
Tumor
0.1
CPT0076350001
Normal
0.1
CPT0017450001
Normal
0.1
CPT0014470001
Normal
0.1
CPT0088710001
Normal
0.1
CPT0079430001
Normal
0.1
CPT0024680001
Normal
0.1
CPT0020130001
Normal
0.1
CPT0001190001
Normal
0.1
CPT0006440003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0078940001
Normal
0.1
CPT0087050003
Normal
0.1
CPT0079000001
Normal
0.1
CPT0063320003
Tumor
0.1
CPT0069010001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0014130001
Normal
0.1
CPT0006950001
Normal
0.1
CPT0065930003
Tumor
0.0
CPT0064370003
Tumor
0.0
CPT0092790003
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0012900004
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0000640003
Tumor
0.0
CPT0086870003
Tumor
0.0
CPT0012920003
Normal
0.0
CPT0006900003
Tumor
0.0
CPT0077490003
Tumor
0.0
CPT0000780007
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0025060001
Normal
0.0
CPT0026420001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0001260009
Tumor
0.0
CPT0086370003
Normal
0.0
CPT0012670003
Tumor
0.0
CPT0082010001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0092730003
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0009020003
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0077310003
Tumor
0.0
CPT0014370004
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0007860003
Tumor
0.0
CPT0025290003
Tumor
0.0
CPT0092290003
Tumor
0.0
CPT0086890003
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0010160003
Tumor
-0.1
CPT0001550001
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0066520001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0081990003
Tumor
-0.1
CPT0087040003
Tumor
-0.1
CPT0084590001
Normal
-0.1
CPT0069160003
Tumor
-0.1
CPT0025350003
Tumor
-0.1
CPT0077320001
Normal
-0.1
CPT0012550003
Tumor
-0.1
CPT0020120003
Tumor
-0.1
CPT0075560003
Tumor
-0.1
CPT0088760003
Tumor
-0.1
CPT0012570003
Normal
-0.1
CPT0092190003
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0066480003
Tumor
-0.1
CPT0088640003
Normal
-0.1
CPT0025580004
Tumor
-0.1
CPT0081880003
Tumor
-0.1
CPT0069190001
Normal
-0.1
CPT0014160003
Tumor
-0.1
CPT0075720003
Tumor
-0.2
CPT0065690003
Tumor
-0.2
CPT0079180003
Tumor
-0.2
CPT0026410003
Tumor
-0.2
CPT0015910003
Tumor
-0.2
CPT0001510001
Normal
-0.2
CPT0001230001
Normal
-0.2
CPT0078510003
Tumor
-0.2
CPT0079270003
Tumor
-0.2
CPT0075170001
Normal
-0.2
CPT0002370001
Normal
-0.2
CPT0078660003
Tumor
-0.2
CPT0088500001
Normal
-0.2
CPT0086820003
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0089020003
Tumor
-0.2
CPT0015730003
Tumor
-0.2
CPT0077110003
Tumor
-0.3
CPT0089460004
Tumor
-0.3
CPT0079510001
Normal
-0.3
CPT0088630003
Tumor
-0.3
CPT0025880003
Tumor
-0.3
CPT0081600003
Tumor
-0.3
CPT0021240003
Tumor
-0.3
CPT0063330001
Normal
-0.3
CPT0017850003
Tumor
-0.3
CPT0066470004
Tumor
-0.3
CPT0012640003
Normal
-0.4
CPT0086030003
Tumor
-0.4
CPT0012080003
Tumor
-0.4
CPT0011410003
Tumor
-0.4
CPT0075130003
Tumor
-0.4
CPT0079300001
Normal
-0.5
CPT0085670003
Tumor
-0.5
CPT0063630003
Tumor
-0.6
CPT0025110003
Tumor
-0.7
CPT0002350011
Tumor
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
